RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 IL6RP08887 468 aaPredicted RBP11.83□□□□□ -0.52
SHMT2-204ENST00000553324 ATP5G2Q06055 141 aa11.83□□□□□ -0.52
SHMT2-204ENST00000553324 IL18Q14116 193 aa11.83□□□□□ -0.52
SHMT2-204ENST00000553324 PHLDA2Q53GA4 152 aa11.83□□□□□ -0.52
SHMT2-204ENST00000553324 THOC7Q6I9Y2 204 aaKnown RBP11.83□□□□□ -0.52
SHMT2-204ENST00000553324 NECAP1Q8NC96 275 aa11.83□□□□□ -0.52
SHMT2-204ENST00000553324 ELOVL1Q9BW60 279 aa11.83□□□□□ -0.52
SHMT2-204ENST00000553324 SLIRPQ9GZT3 109 aaKnown RBP11.83□□□□□ -0.52
SHMT2-204ENST00000553324 C6orf62Q9GZU0 229 aaPredicted RBP11.83□□□□□ -0.52
SHMT2-204ENST00000553324 TMEM140Q9NV12 185 aa11.83□□□□□ -0.52
SHMT2-204ENST00000553324 PEF1Q9UBV8 284 aaKnown RBP11.83□□□□□ -0.52
SHMT2-204ENST00000553324 RSL24D1Q9UHA3 163 aaKnown RBP11.83□□□□□ -0.52
SHMT2-204ENST00000553324 CEPT1Q9Y6K0 416 aa11.83□□□□□ -0.52
SHMT2-204ENST00000553324 MARCH11A6NNE9 402 aa11.82□□□□□ -0.52
SHMT2-204ENST00000553324 TEX22C9J3V5 150 aa11.82□□□□□ -0.52
SHMT2-204ENST00000553324 CD74P04233 296 aa11.82□□□□□ -0.52
SHMT2-204ENST00000553324 CRYGCP07315 174 aa11.82□□□□□ -0.52
SHMT2-204ENST00000553324 ECI1P42126 302 aa11.82□□□□□ -0.52
SHMT2-204ENST00000553324 LPAR6P43657 344 aa11.82□□□□□ -0.52
SHMT2-204ENST00000553324 SLURP1P55000 103 aa11.82□□□□□ -0.52
SHMT2-204ENST00000553324 RHOGP84095 191 aa11.82□□□□□ -0.52
SHMT2-204ENST00000553324 MEF2DQ14814 521 aa11.82□□□□□ -0.52
SHMT2-204ENST00000553324 RNASE12Q5GAN4 147 aaKnown RBP11.82□□□□□ -0.52
SHMT2-204ENST00000553324 C10orf55Q5SWW7 151 aa11.82□□□□□ -0.52
SHMT2-204ENST00000553324 HSD17B13Q7Z5P4 300 aaPredicted RBP11.82□□□□□ -0.52
SHMT2-204ENST00000553324 TBC1D26Q86UD7 250 aa11.82□□□□□ -0.52
SHMT2-204ENST00000553324 TERB2Q8NHR7 220 aa11.82□□□□□ -0.52
SHMT2-204ENST00000553324 ZFAND1Q8TCF1 268 aa11.82□□□□□ -0.52
SHMT2-204ENST00000553324 TSC22D3Q99576 134 aa11.82□□□□□ -0.52
SHMT2-204ENST00000553324 FKBP11Q9NYL4 201 aa11.82□□□□□ -0.52
SHMT2-204ENST00000553324 ANKRD34BA5PLL1 514 aa11.81□□□□□ -0.52
SHMT2-204ENST00000553324 CCDC160A6NGH7 325 aa11.81□□□□□ -0.52
SHMT2-204ENST00000553324 HMX3A6NHT5 357 aa11.81□□□□□ -0.52
SHMT2-204ENST00000553324 E7EUB6 86 aa11.81□□□□□ -0.52
SHMT2-204ENST00000553324 CYB5BO43169 146 aa11.81□□□□□ -0.52
SHMT2-204ENST00000553324 SNAPC5O75971 98 aa11.81□□□□□ -0.52
SHMT2-204ENST00000553324 RAB3DO95716 219 aa11.81□□□□□ -0.52
SHMT2-204ENST00000553324 KRASP01116 189 aa11.81□□□□□ -0.52
SHMT2-204ENST00000553324 DEFA4P12838 97 aa11.81□□□□□ -0.52
SHMT2-204ENST00000553324 PGAM2P15259 253 aa11.81□□□□□ -0.52
SHMT2-204ENST00000553324 HIST1H1BP16401 226 aaKnown RBP11.81□□□□□ -0.52
SHMT2-204ENST00000553324 PTBP1P26599 531 aaKnown RBP eCLIP11.81□□□□□ -0.52
SHMT2-204ENST00000553324 PSMB6P28072 239 aa11.81□□□□□ -0.52
SHMT2-204ENST00000553324 ZNF585BQ52M93 769 aa11.81□□□□□ -0.52
SHMT2-204ENST00000553324 DEFB121Q5J5C9 76 aa11.81□□□□□ -0.52
SHMT2-204ENST00000553324 STEAP1BQ6NZ63 245 aa11.81□□□□□ -0.52
SHMT2-204ENST00000553324 ACSM6Q6P461 480 aa11.81□□□□□ -0.52
SHMT2-204ENST00000553324 LHFPL1Q86WI0 220 aa11.81□□□□□ -0.52
SHMT2-204ENST00000553324 MCFD2Q8NI22 146 aa11.81□□□□□ -0.52
SHMT2-204ENST00000553324 SMIM4Q8WVI0 70 aa11.81□□□□□ -0.52
SHMT2-204ENST00000553324 AKIP1Q9NQ31 210 aa11.81□□□□□ -0.52
SHMT2-204ENST00000553324 TNCP24821 2201 aa11.8□□□□□ -0.52
SHMT2-204ENST00000553324 FABP12A6NFH5 140 aa11.8□□□□□ -0.52
SHMT2-204ENST00000553324 K7EIL1 84 aa11.8□□□□□ -0.52
SHMT2-204ENST00000553324 SAP30O75446 220 aa11.8□□□□□ -0.52
SHMT2-204ENST00000553324 SERPINE2P07093 398 aa11.8□□□□□ -0.52
SHMT2-204ENST00000553324 RPA2P15927 270 aa11.8□□□□□ -0.52
SHMT2-204ENST00000553324 CTRB1P17538 263 aa11.8□□□□□ -0.52
SHMT2-204ENST00000553324 OR2B8PP59922 312 aa11.8□□□□□ -0.52
SHMT2-204ENST00000553324 RND3P61587 244 aa11.8□□□□□ -0.52
SHMT2-204ENST00000553324 KLK9Q2XQG4 91 aa11.8□□□□□ -0.52
SHMT2-204ENST00000553324 CTRB2Q6GPI1 263 aa11.8□□□□□ -0.52
SHMT2-204ENST00000553324 OR1L8Q8NGR8 309 aa11.8□□□□□ -0.52
SHMT2-204ENST00000553324 OR4C12Q96R67 309 aa11.8□□□□□ -0.52
SHMT2-204ENST00000553324 QTRT1Q9BXR0 403 aaKnown RBP11.8□□□□□ -0.52
SHMT2-204ENST00000553324 NXF2Q9GZY0 626 aaKnown RBP11.8□□□□□ -0.52
SHMT2-204ENST00000553324 THYN1Q9P016 225 aa11.8□□□□□ -0.52
SHMT2-204ENST00000553324 KLK9Q9UKQ9 250 aa11.8□□□□□ -0.52
SHMT2-204ENST00000553324 WI2-2373I1.2A0A1W2PRP0 233 aa11.79□□□□□ -0.52
SHMT2-204ENST00000553324 DISC1C4P0D8 188 aa11.79□□□□□ -0.52
SHMT2-204ENST00000553324 ZNF701M0R085 212 aaPredicted RBP11.79□□□□□ -0.52
SHMT2-204ENST00000553324 B3GALNT1O75752 331 aa11.79□□□□□ -0.52
SHMT2-204ENST00000553324 ATG12O94817 140 aa11.79□□□□□ -0.52
SHMT2-204ENST00000553324 PRH1P02810 166 aa11.79□□□□□ -0.52
SHMT2-204ENST00000553324 TRAPPC2P0DI81 140 aa11.79□□□□□ -0.52
SHMT2-204ENST00000553324 TRAPPC2BP0DI82 140 aa11.79□□□□□ -0.52
SHMT2-204ENST00000553324 ZNF45Q02386 682 aa11.79□□□□□ -0.52
SHMT2-204ENST00000553324 KLF5Q13887 457 aaPredicted RBP11.79□□□□□ -0.52
SHMT2-204ENST00000553324 C15orf32Q32M92 178 aa11.79□□□□□ -0.52
SHMT2-204ENST00000553324 SCGB2B2Q4G0G5 96 aa11.79□□□□□ -0.52
SHMT2-204ENST00000553324 CCDC71LQ8N9Z2 235 aa11.79□□□□□ -0.52
SHMT2-204ENST00000553324 OR6Q1Q8NGQ2 317 aa11.79□□□□□ -0.52
SHMT2-204ENST00000553324 PRNDQ9UKY0 176 aa11.79□□□□□ -0.52
SHMT2-204ENST00000553324 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.78□□□□□ -0.52
SHMT2-204ENST00000553324 TRAV3A0A0B4J244 114 aa11.78□□□□□ -0.52
SHMT2-204ENST00000553324 A0A1B0GW64 132 aa11.78□□□□□ -0.52
SHMT2-204ENST00000553324 GSTZ1O43708 216 aaPredicted RBP11.78□□□□□ -0.52
SHMT2-204ENST00000553324 OR2J3O76001 311 aa11.78□□□□□ -0.52
SHMT2-204ENST00000553324 AKAIN1P0CW23 69 aa11.78□□□□□ -0.52
SHMT2-204ENST00000553324 TNFSF8P32971 234 aa11.78□□□□□ -0.52
SHMT2-204ENST00000553324 G6PCP35575 357 aa11.78□□□□□ -0.52
SHMT2-204ENST00000553324 PIGPP57054 158 aa11.78□□□□□ -0.52
SHMT2-204ENST00000553324 RPEL1Q2QD12 228 aa11.78□□□□□ -0.52
SHMT2-204ENST00000553324 OR5B3Q8NH48 314 aa11.78□□□□□ -0.52
SHMT2-204ENST00000553324 COPZ2Q9P299 210 aa11.78□□□□□ -0.52
SHMT2-204ENST00000553324 FBXL7Q9UJT9 491 aa11.78□□□□□ -0.52
SHMT2-204ENST00000553324 ZNF256Q9Y2P7 627 aaPredicted RBP11.78□□□□□ -0.52
SHMT2-204ENST00000553324 TEX50A0A1B0GTY4 177 aa11.77□□□□□ -0.53
SHMT2-204ENST00000553324 AREGP15514 252 aa11.77□□□□□ -0.53
SHMT2-204ENST00000553324 S100A5P33763 92 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms