RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 C3orf85A0A1B0GTC6 90 aa14.85□□□□□ -0.03
DDX55-211ENST00000544429 I3L521 148 aa14.85□□□□□ -0.03
DDX55-211ENST00000544429 B3GALNT1O75752 331 aa14.85□□□□□ -0.03
DDX55-211ENST00000544429 KRASP01116 189 aa14.85□□□□□ -0.03
DDX55-211ENST00000544429 RPA2P15927 270 aa14.85□□□□□ -0.03
DDX55-211ENST00000544429 FAUP35544 74 aaKnown RBP14.85□□□□□ -0.03
DDX55-211ENST00000544429 G6PCP35575 357 aa14.85□□□□□ -0.03
DDX55-211ENST00000544429 RPL27AP46776 148 aaKnown RBP14.85□□□□□ -0.03
DDX55-211ENST00000544429 DMBX1Q8NFW5 382 aa14.85□□□□□ -0.03
DDX55-211ENST00000544429 CASTOR1Q8WTX7 329 aa14.85□□□□□ -0.03
DDX55-211ENST00000544429 GNB4Q9HAV0 340 aa14.85□□□□□ -0.03
DDX55-211ENST00000544429 MCUBQ9NWR8 336 aa14.85□□□□□ -0.03
DDX55-211ENST00000544429 COPZ2Q9P299 210 aa14.85□□□□□ -0.03
DDX55-211ENST00000544429 P0C879 139 aa14.84□□□□□ -0.03
DDX55-211ENST00000544429 MYOD1P15172 320 aa14.84□□□□□ -0.03
DDX55-211ENST00000544429 UCP1P25874 307 aa14.84□□□□□ -0.03
DDX55-211ENST00000544429 OR2B8PP59922 312 aa14.84□□□□□ -0.03
DDX55-211ENST00000544429 ERVK-16P61578 105 aa14.84□□□□□ -0.03
DDX55-211ENST00000544429 FHL3Q13643 280 aa14.84□□□□□ -0.03
DDX55-211ENST00000544429 KLK9Q2XQG4 91 aa14.84□□□□□ -0.03
DDX55-211ENST00000544429 TTC9CQ8N5M4 171 aa14.84□□□□□ -0.03
DDX55-211ENST00000544429 OR5T1Q8NG75 326 aa14.84□□□□□ -0.03
DDX55-211ENST00000544429 TMEM230Q96A57 120 aa14.84□□□□□ -0.03
DDX55-211ENST00000544429 RAX2Q96IS3 184 aa14.84□□□□□ -0.03
DDX55-211ENST00000544429 KLK9Q9UKQ9 250 aa14.84□□□□□ -0.03
DDX55-211ENST00000544429 C14orf166Q9Y224 244 aaKnown RBP14.84□□□□□ -0.03
DDX55-211ENST00000544429 VSIG4Q9Y279 399 aa14.84□□□□□ -0.03
DDX55-211ENST00000544429 CRYM-AS1A6NIL9 109 aa14.83□□□□□ -0.04
DDX55-211ENST00000544429 OR9G9P0C7N8 305 aa14.83□□□□□ -0.04
DDX55-211ENST00000544429 MYCNOSP40205 109 aa14.83□□□□□ -0.04
DDX55-211ENST00000544429 LINC00482Q8N8I6 264 aa14.83□□□□□ -0.04
DDX55-211ENST00000544429 PHB2Q99623 299 aa14.83□□□□□ -0.04
DDX55-211ENST00000544429 PTTG2Q9NZH5 202 aa14.83□□□□□ -0.04
DDX55-211ENST00000544429 NOTCH1P46531 2555 aa14.83□□□□□ -0.04
DDX55-211ENST00000544429 TRBV9A0A0B4J1U6 114 aa14.82□□□□□ -0.04
DDX55-211ENST00000544429 NPIPB5A8MRT5 1133 aa14.82□□□□□ -0.04
DDX55-211ENST00000544429 NUDT19A8MXV4 375 aa14.82□□□□□ -0.04
DDX55-211ENST00000544429 CCL24O00175 119 aa14.82□□□□□ -0.04
DDX55-211ENST00000544429 RBMXL2O75526 392 aaKnown RBP14.82□□□□□ -0.04
DDX55-211ENST00000544429 SERPINE2P07093 398 aa14.82□□□□□ -0.04
DDX55-211ENST00000544429 CRYGCP07315 174 aa14.82□□□□□ -0.04
DDX55-211ENST00000544429 APELAP0DMC3 54 aa14.82□□□□□ -0.04
DDX55-211ENST00000544429 MRPL41Q8IXM3 137 aaKnown RBP14.82□□□□□ -0.04
DDX55-211ENST00000544429 GLYATL2Q8WU03 294 aa14.82□□□□□ -0.04
DDX55-211ENST00000544429 GALNT14Q96FL9 552 aa14.82□□□□□ -0.04
DDX55-211ENST00000544429 SCGB3A2Q96PL1 93 aa14.82□□□□□ -0.04
DDX55-211ENST00000544429 SRSF8Q9BRL6 282 aaKnown RBP14.82□□□□□ -0.04
DDX55-211ENST00000544429 TMEM222Q9H0R3 208 aa14.82□□□□□ -0.04
DDX55-211ENST00000544429 NAA60Q9H7X0 242 aa14.82□□□□□ -0.04
DDX55-211ENST00000544429 TMEM14BQ9NUH8 114 aa14.82□□□□□ -0.04
DDX55-211ENST00000544429 IGLC7A0M8Q6 106 aa14.81□□□□□ -0.04
DDX55-211ENST00000544429 HMX3A6NHT5 357 aa14.81□□□□□ -0.04
DDX55-211ENST00000544429 CDS2O95674 445 aa14.81□□□□□ -0.04
DDX55-211ENST00000544429 IGKV1-5P01602 117 aa14.81□□□□□ -0.04
DDX55-211ENST00000544429 TRGV3P03979 118 aa14.81□□□□□ -0.04
DDX55-211ENST00000544429 IL7P13232 177 aa14.81□□□□□ -0.04
DDX55-211ENST00000544429 CD40LGP29965 261 aa14.81□□□□□ -0.04
DDX55-211ENST00000544429 DEFB136Q30KP8 78 aa14.81□□□□□ -0.04
DDX55-211ENST00000544429 SP6Q3SY56 376 aa14.81□□□□□ -0.04
DDX55-211ENST00000544429 MS4A10Q96PG2 267 aa14.81□□□□□ -0.04
DDX55-211ENST00000544429 ZNF257Q9Y2Q1 563 aa14.81□□□□□ -0.04
DDX55-211ENST00000544429 TEX13DA0A0J9YY54 714 aaPredicted RBP14.8□□□□□ -0.04
DDX55-211ENST00000544429 TEX50A0A1B0GTY4 177 aa14.8□□□□□ -0.04
DDX55-211ENST00000544429 DBX1A6NMT0 343 aa14.8□□□□□ -0.04
DDX55-211ENST00000544429 C15orf61A6NNL5 157 aa14.8□□□□□ -0.04
DDX55-211ENST00000544429 PF4P02776 101 aa14.8□□□□□ -0.04
DDX55-211ENST00000544429 OR5AC1P0C628 307 aa14.8□□□□□ -0.04
DDX55-211ENST00000544429 AREGP15514 252 aa14.8□□□□□ -0.04
DDX55-211ENST00000544429 CTRB1P17538 263 aa14.8□□□□□ -0.04
DDX55-211ENST00000544429 TPPP2P59282 170 aa14.8□□□□□ -0.04
DDX55-211ENST00000544429 SUPT4H1P63272 117 aaKnown RBP14.8□□□□□ -0.04
DDX55-211ENST00000544429 TRIQKQ629K1 86 aa14.8□□□□□ -0.04
DDX55-211ENST00000544429 ZNF57Q68EA5 555 aaPredicted RBP14.8□□□□□ -0.04
DDX55-211ENST00000544429 CTRB2Q6GPI1 263 aa14.8□□□□□ -0.04
DDX55-211ENST00000544429 SLC25A42Q86VD7 318 aa14.8□□□□□ -0.04
DDX55-211ENST00000544429 LHFPL5Q8TAF8 219 aa14.8□□□□□ -0.04
DDX55-211ENST00000544429 TSC22D3Q99576 134 aa14.8□□□□□ -0.04
DDX55-211ENST00000544429 SLC25A21Q9BQT8 299 aaPredicted RBP14.8□□□□□ -0.04
DDX55-211ENST00000544429 COMMD5Q9GZQ3 224 aa14.8□□□□□ -0.04
DDX55-211ENST00000544429 NDUFA4L2Q9NRX3 87 aa14.8□□□□□ -0.04
DDX55-211ENST00000544429 LGALS1P09382 135 aaKnown RBP14.79□□□□□ -0.04
DDX55-211ENST00000544429 SAMD5Q5TGI4 173 aa14.79□□□□□ -0.04
DDX55-211ENST00000544429 THOC7Q6I9Y2 204 aaKnown RBP14.79□□□□□ -0.04
DDX55-211ENST00000544429 OR5B3Q8NH48 314 aa14.79□□□□□ -0.04
DDX55-211ENST00000544429 TMEM56Q96MV1 263 aa14.79□□□□□ -0.04
DDX55-211ENST00000544429 DUX3Q96PT4 197 aa14.79□□□□□ -0.04
DDX55-211ENST00000544429 FYTTD1Q96QD9 318 aaKnown RBP14.79□□□□□ -0.04
DDX55-211ENST00000544429 QTRT1Q9BXR0 403 aaKnown RBP14.79□□□□□ -0.04
DDX55-211ENST00000544429 COA4Q9NYJ1 87 aa14.79□□□□□ -0.04
DDX55-211ENST00000544429 PRNDQ9UKY0 176 aa14.79□□□□□ -0.04
DDX55-211ENST00000544429 NSG2Q9Y328 171 aa14.79□□□□□ -0.04
DDX55-211ENST00000544429 TMEM56-RWDD3S4R434 201 aa14.79□□□□□ -0.04
DDX55-211ENST00000544429 NAP1L6A6NFF2 107 aa14.78□□□□□ -0.04
DDX55-211ENST00000544429 PSMB6P28072 239 aa14.78□□□□□ -0.04
DDX55-211ENST00000544429 BTCP35070 178 aa14.78□□□□□ -0.04
DDX55-211ENST00000544429 DHODHQ02127 395 aa14.78□□□□□ -0.04
DDX55-211ENST00000544429 H2BFWTQ7Z2G1 175 aa14.78□□□□□ -0.04
DDX55-211ENST00000544429 OR1L8Q8NGR8 309 aa14.78□□□□□ -0.04
DDX55-211ENST00000544429 USMG5Q96IX5 58 aa14.78□□□□□ -0.04
DDX55-211ENST00000544429 FANCD2OSQ96PS1 177 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms