RNA–Protein interactions for RNA: ENST00000543988.1

OTUB1-212, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 1 (best) BASIC

Gene OTUB1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-212ENST00000543988 ZNF486Q96H40 463 aaPredicted RBP16.86■□□□□ 0.29
OTUB1-212ENST00000543988 FYTTD1Q96QD9 318 aaKnown RBP16.86■□□□□ 0.29
OTUB1-212ENST00000543988 DISC1C4P0D8 188 aa16.85■□□□□ 0.29
OTUB1-212ENST00000543988 RBMXL2O75526 392 aaKnown RBP16.85■□□□□ 0.29
OTUB1-212ENST00000543988 BRI3O95415 125 aa16.85■□□□□ 0.29
OTUB1-212ENST00000543988 KRASP01116 189 aa16.85■□□□□ 0.29
OTUB1-212ENST00000543988 G6PCP35575 357 aa16.85■□□□□ 0.29
OTUB1-212ENST00000543988 PIGPP57054 158 aa16.85■□□□□ 0.29
OTUB1-212ENST00000543988 ZNF79Q15937 498 aa16.85■□□□□ 0.29
OTUB1-212ENST00000543988 PYDC2Q56P42 97 aa16.85■□□□□ 0.29
OTUB1-212ENST00000543988 C19orf35Q6ZS72 473 aa16.85■□□□□ 0.29
OTUB1-212ENST00000543988 MARCH1Q8TCQ1 289 aa16.85■□□□□ 0.29
OTUB1-212ENST00000543988 TRIM63Q969Q1 353 aa16.85■□□□□ 0.29
OTUB1-212ENST00000543988 FAM212BQ9NTI7 297 aaPredicted RBP16.85■□□□□ 0.29
OTUB1-212ENST00000543988 CGB1A6NKQ9 187 aa16.84■□□□□ 0.29
OTUB1-212ENST00000543988 PRH1P02810 166 aa16.84■□□□□ 0.29
OTUB1-212ENST00000543988 AREGP15514 252 aa16.84■□□□□ 0.29
OTUB1-212ENST00000543988 OR2B8PP59922 312 aa16.84■□□□□ 0.29
OTUB1-212ENST00000543988 TTC9CQ8N5M4 171 aa16.84■□□□□ 0.29
OTUB1-212ENST00000543988 THAP7Q9BT49 309 aaPredicted RBP16.84■□□□□ 0.29
OTUB1-212ENST00000543988 IGHV4OR15-8A0A075B7B6 117 aa16.83■□□□□ 0.28
OTUB1-212ENST00000543988 A0A087WW49 117 aa16.83■□□□□ 0.28
OTUB1-212ENST00000543988 C13orf42A0A1B0GVH6 325 aa16.83■□□□□ 0.28
OTUB1-212ENST00000543988 DUS4LO95620 317 aaKnown RBP16.83■□□□□ 0.28
OTUB1-212ENST00000543988 IGKV1-39P01597 117 aa16.83■□□□□ 0.28
OTUB1-212ENST00000543988 PRB2P02812 416 aaPredicted RBP16.83■□□□□ 0.28
OTUB1-212ENST00000543988 IGKV1D-39P04432 117 aa16.83■□□□□ 0.28
OTUB1-212ENST00000543988 OR8U8P0C7N1 319 aa16.83■□□□□ 0.28
OTUB1-212ENST00000543988 ZNF45Q02386 682 aa16.83■□□□□ 0.28
OTUB1-212ENST00000543988 OR51S1Q8NGJ8 323 aa16.83■□□□□ 0.28
OTUB1-212ENST00000543988 ZFAND1Q8TCF1 268 aa16.83■□□□□ 0.28
OTUB1-212ENST00000543988 DPF1Q92782 380 aa16.83■□□□□ 0.28
OTUB1-212ENST00000543988 NDUFA13Q9P0J0 144 aa16.83■□□□□ 0.28
OTUB1-212ENST00000543988 DNAH3Q8TD57 4116 aa16.82■□□□□ 0.28
OTUB1-212ENST00000543988 NPIPB5A8MRT5 1133 aa16.82■□□□□ 0.28
OTUB1-212ENST00000543988 H0Y980 276 aa16.82■□□□□ 0.28
OTUB1-212ENST00000543988 CTSDP07339 412 aaPredicted RBP16.82■□□□□ 0.28
OTUB1-212ENST00000543988 FGF2P09038 288 aa16.82■□□□□ 0.28
OTUB1-212ENST00000543988 RHOGP84095 191 aa16.82■□□□□ 0.28
OTUB1-212ENST00000543988 Q8N402 240 aa16.82■□□□□ 0.28
OTUB1-212ENST00000543988 OR6Q1Q8NGQ2 317 aa16.82■□□□□ 0.28
OTUB1-212ENST00000543988 TP53RKQ96S44 253 aa16.82■□□□□ 0.28
OTUB1-212ENST00000543988 PRRT1Q99946 306 aa16.82■□□□□ 0.28
OTUB1-212ENST00000543988 MCRIP2Q9BUT9 160 aaKnown RBP16.82■□□□□ 0.28
OTUB1-212ENST00000543988 COMMD5Q9GZQ3 224 aa16.82■□□□□ 0.28
OTUB1-212ENST00000543988 COPZ2Q9P299 210 aa16.82■□□□□ 0.28
OTUB1-212ENST00000543988 ZNF257Q9Y2Q1 563 aa16.82■□□□□ 0.28
OTUB1-212ENST00000543988 A0A0G2JLM5 398 aa16.81■□□□□ 0.28
OTUB1-212ENST00000543988 LINC01619G3V211 115 aa16.81■□□□□ 0.28
OTUB1-212ENST00000543988 WIPF1O43516 503 aa16.81■□□□□ 0.28
OTUB1-212ENST00000543988 SERPINE2P07093 398 aa16.81■□□□□ 0.28
OTUB1-212ENST00000543988 PTBP1P26599 531 aaKnown RBP eCLIP16.81■□□□□ 0.28
OTUB1-212ENST00000543988 ECI1P42126 302 aa16.81■□□□□ 0.28
OTUB1-212ENST00000543988 SLURP1P55000 103 aa16.81■□□□□ 0.28
OTUB1-212ENST00000543988 KLF9Q13886 244 aaPredicted RBP16.81■□□□□ 0.28
OTUB1-212ENST00000543988 SLC25A42Q86VD7 318 aa16.81■□□□□ 0.28
OTUB1-212ENST00000543988 CADM3Q8N126 398 aa16.81■□□□□ 0.28
OTUB1-212ENST00000543988 CCDC71LQ8N9Z2 235 aa16.81■□□□□ 0.28
OTUB1-212ENST00000543988 QTRT1Q9BXR0 403 aaKnown RBP16.81■□□□□ 0.28
OTUB1-212ENST00000543988 AKIP1Q9NQ31 210 aa16.81■□□□□ 0.28
OTUB1-212ENST00000543988 SLC2A8Q9NY64 477 aa16.81■□□□□ 0.28
OTUB1-212ENST00000543988 NSG2Q9Y328 171 aa16.81■□□□□ 0.28
OTUB1-212ENST00000543988 TRBV9A0A0B4J1U6 114 aa16.8■□□□□ 0.28
OTUB1-212ENST00000543988 IGLC7A0M8Q6 106 aa16.8■□□□□ 0.28
OTUB1-212ENST00000543988 REG1AP05451 166 aa16.8■□□□□ 0.28
OTUB1-212ENST00000543988 HOXD3P31249 432 aaPredicted RBP16.8■□□□□ 0.28
OTUB1-212ENST00000543988 ETV6P41212 452 aa16.8■□□□□ 0.28
OTUB1-212ENST00000543988 SURF2Q15527 256 aaPredicted RBP16.8■□□□□ 0.28
OTUB1-212ENST00000543988 SPANXN2Q5MJ10 180 aa16.8■□□□□ 0.28
OTUB1-212ENST00000543988 SEC22AQ96IW7 307 aa16.8■□□□□ 0.28
OTUB1-212ENST00000543988 USMG5Q96IX5 58 aa16.8■□□□□ 0.28
OTUB1-212ENST00000543988 GPR61Q9BZJ8 451 aa16.8■□□□□ 0.28
OTUB1-212ENST00000543988 MCUBQ9NWR8 336 aa16.8■□□□□ 0.28
OTUB1-212ENST00000543988 C14orf166Q9Y224 244 aaKnown RBP16.8■□□□□ 0.28
OTUB1-212ENST00000543988 C3orf85A0A1B0GTC6 90 aa16.79■□□□□ 0.28
OTUB1-212ENST00000543988 FAM223BA6NKX1 122 aa16.79■□□□□ 0.28
OTUB1-212ENST00000543988 HSPB1P04792 205 aaKnown RBP16.79■□□□□ 0.28
OTUB1-212ENST00000543988 PSMB6P28072 239 aa16.79■□□□□ 0.28
OTUB1-212ENST00000543988 FAM223AQ8IWN6 122 aa16.79■□□□□ 0.28
OTUB1-212ENST00000543988 DCUN1D4Q92564 292 aa16.79■□□□□ 0.28
OTUB1-212ENST00000543988 RTBDNQ9BSG5 229 aaPredicted RBP16.79■□□□□ 0.28
OTUB1-212ENST00000543988 C5orf66Q9H5L9 145 aa16.79■□□□□ 0.28
OTUB1-212ENST00000543988 PRKDCP78527 4128 aaKnown RBP16.79■□□□□ 0.28
OTUB1-212ENST00000543988 TEX50A0A1B0GTY4 177 aa16.78■□□□□ 0.28
OTUB1-212ENST00000543988 ANKRD34BA5PLL1 514 aa16.78■□□□□ 0.28
OTUB1-212ENST00000543988 DBX1A6NMT0 343 aa16.78■□□□□ 0.28
OTUB1-212ENST00000543988 SNAPC5O75971 98 aa16.78■□□□□ 0.28
OTUB1-212ENST00000543988 OR2J3O76001 311 aa16.78■□□□□ 0.28
OTUB1-212ENST00000543988 CRYGCP07315 174 aa16.78■□□□□ 0.28
OTUB1-212ENST00000543988 SP6Q3SY56 376 aa16.78■□□□□ 0.28
OTUB1-212ENST00000543988 ZNF343Q6P1L6 599 aa16.78■□□□□ 0.28
OTUB1-212ENST00000543988 NECAP1Q8NC96 275 aa16.78■□□□□ 0.28
OTUB1-212ENST00000543988 OR10W1Q8NGF6 305 aa16.78■□□□□ 0.28
OTUB1-212ENST00000543988 DLX4Q92988 240 aaPredicted RBP16.78■□□□□ 0.28
OTUB1-212ENST00000543988 SRRQ9GZT4 340 aa16.78■□□□□ 0.28
OTUB1-212ENST00000543988 PRNDQ9UKY0 176 aa16.78■□□□□ 0.28
OTUB1-212ENST00000543988 OR51B2Q9Y5P1 312 aa16.78■□□□□ 0.28
OTUB1-212ENST00000543988 C15orf61A6NNL5 157 aa16.77■□□□□ 0.28
OTUB1-212ENST00000543988 SEC14L6B5MCN3 397 aa16.77■□□□□ 0.28
OTUB1-212ENST00000543988 TRBV12-3P01733 135 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms