RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 SLC2A9Q9NRM0 540 aa13.03□□□□□ -0.32
CD9-209ENST00000540891 LINC01619G3V211 115 aa13.02□□□□□ -0.33
CD9-209ENST00000540891 GSTZ1O43708 216 aaPredicted RBP13.02□□□□□ -0.33
CD9-209ENST00000540891 PI3P19957 117 aa13.02□□□□□ -0.33
CD9-209ENST00000540891 SLURP1P55000 103 aa13.02□□□□□ -0.33
CD9-209ENST00000540891 DCUN1D4Q92564 292 aa13.02□□□□□ -0.33
CD9-209ENST00000540891 DPF1Q92782 380 aa13.02□□□□□ -0.33
CD9-209ENST00000540891 FYTTD1Q96QD9 318 aaKnown RBP13.02□□□□□ -0.33
CD9-209ENST00000540891 TRBV9A0A0B4J1U6 114 aa13.01□□□□□ -0.33
CD9-209ENST00000540891 A0A0G2JLM5 398 aa13.01□□□□□ -0.33
CD9-209ENST00000540891 FABP12A6NFH5 140 aa13.01□□□□□ -0.33
CD9-209ENST00000540891 MARCH11A6NNE9 402 aa13.01□□□□□ -0.33
CD9-209ENST00000540891 HSPB1P04792 205 aaKnown RBP13.01□□□□□ -0.33
CD9-209ENST00000540891 AREGP15514 252 aa13.01□□□□□ -0.33
CD9-209ENST00000540891 PPP5CP53041 499 aa13.01□□□□□ -0.33
CD9-209ENST00000540891 OR2B8PP59922 312 aa13.01□□□□□ -0.33
CD9-209ENST00000540891 RND3P61587 244 aa13.01□□□□□ -0.33
CD9-209ENST00000540891 DMBX1Q8NFW5 382 aa13.01□□□□□ -0.33
CD9-209ENST00000540891 TERB2Q8NHR7 220 aa13.01□□□□□ -0.33
CD9-209ENST00000540891 DLX4Q92988 240 aaPredicted RBP13.01□□□□□ -0.33
CD9-209ENST00000540891 GPR61Q9BZJ8 451 aa13.01□□□□□ -0.33
CD9-209ENST00000540891 FAM212BQ9NTI7 297 aaPredicted RBP13.01□□□□□ -0.33
CD9-209ENST00000540891 C13orf42A0A1B0GVH6 325 aa13□□□□□ -0.33
CD9-209ENST00000540891 NPIPB5A8MRT5 1133 aa13□□□□□ -0.33
CD9-209ENST00000540891 KRASP01116 189 aa13□□□□□ -0.33
CD9-209ENST00000540891 IGKV1-39P01597 117 aa13□□□□□ -0.33
CD9-209ENST00000540891 IGKV1D-39P04432 117 aa13□□□□□ -0.33
CD9-209ENST00000540891 CRYGCP07315 174 aa13□□□□□ -0.33
CD9-209ENST00000540891 FGF2P09038 288 aa13□□□□□ -0.33
CD9-209ENST00000540891 PGAM2P15259 253 aa13□□□□□ -0.33
CD9-209ENST00000540891 PTBP1P26599 531 aaKnown RBP eCLIP13□□□□□ -0.33
CD9-209ENST00000540891 G6PCP35575 357 aa13□□□□□ -0.33
CD9-209ENST00000540891 RHOGP84095 191 aa13□□□□□ -0.33
CD9-209ENST00000540891 SCGB2B2Q4G0G5 96 aa13□□□□□ -0.33
CD9-209ENST00000540891 ZNF343Q6P1L6 599 aa13□□□□□ -0.33
CD9-209ENST00000540891 REC114Q7Z4M0 266 aa13□□□□□ -0.33
CD9-209ENST00000540891 CADM3Q8N126 398 aa13□□□□□ -0.33
CD9-209ENST00000540891 OR4C16Q8NGL9 310 aa13□□□□□ -0.33
CD9-209ENST00000540891 ZNF486Q96H40 463 aaPredicted RBP13□□□□□ -0.33
CD9-209ENST00000540891 USMG5Q96IX5 58 aa13□□□□□ -0.33
CD9-209ENST00000540891 AKIP1Q9NQ31 210 aa13□□□□□ -0.33
CD9-209ENST00000540891 ZNF257Q9Y2Q1 563 aa13□□□□□ -0.33
CD9-209ENST00000540891 V9GYH0 126 aa13□□□□□ -0.33
CD9-209ENST00000540891 ANKRD20A5PA0PJZ0 165 aa12.99□□□□□ -0.33
CD9-209ENST00000540891 SEC14L6B5MCN3 397 aa12.99□□□□□ -0.33
CD9-209ENST00000540891 OVOL1O14753 267 aa12.99□□□□□ -0.33
CD9-209ENST00000540891 TRBV12-3P01733 135 aa12.99□□□□□ -0.33
CD9-209ENST00000540891 CTRB1P17538 263 aa12.99□□□□□ -0.33
CD9-209ENST00000540891 PSMB6P28072 239 aa12.99□□□□□ -0.33
CD9-209ENST00000540891 S100GP29377 79 aa12.99□□□□□ -0.33
CD9-209ENST00000540891 PIGPP57054 158 aa12.99□□□□□ -0.33
CD9-209ENST00000540891 ERVK-16P61578 105 aa12.99□□□□□ -0.33
CD9-209ENST00000540891 MEF2DQ14814 521 aa12.99□□□□□ -0.33
CD9-209ENST00000540891 KLK9Q2XQG4 91 aa12.99□□□□□ -0.33
CD9-209ENST00000540891 C9orf66Q5T8R8 295 aa12.99□□□□□ -0.33
CD9-209ENST00000540891 CTRB2Q6GPI1 263 aa12.99□□□□□ -0.33
CD9-209ENST00000540891 OR13C8Q8NGS7 320 aa12.99□□□□□ -0.33
CD9-209ENST00000540891 KLK9Q9UKQ9 250 aa12.99□□□□□ -0.33
CD9-209ENST00000540891 IGLC7A0M8Q6 106 aa12.98□□□□□ -0.33
CD9-209ENST00000540891 ANKRD34BA5PLL1 514 aa12.98□□□□□ -0.33
CD9-209ENST00000540891 OR2J3O76001 311 aa12.98□□□□□ -0.33
CD9-209ENST00000540891 AKAIN1P0CW23 69 aa12.98□□□□□ -0.33
CD9-209ENST00000540891 ZNF79Q15937 498 aa12.98□□□□□ -0.33
CD9-209ENST00000540891 SLC25A42Q86VD7 318 aa12.98□□□□□ -0.33
CD9-209ENST00000540891 MARCH1Q8TCQ1 289 aa12.98□□□□□ -0.33
CD9-209ENST00000540891 SEC22AQ96IW7 307 aa12.98□□□□□ -0.33
CD9-209ENST00000540891 FANCD2OSQ96PS1 177 aa12.98□□□□□ -0.33
CD9-209ENST00000540891 TP53RKQ96S44 253 aa12.98□□□□□ -0.33
CD9-209ENST00000540891 COMMD5Q9GZQ3 224 aa12.98□□□□□ -0.33
CD9-209ENST00000540891 RANGRFQ9HD47 186 aaPredicted RBP12.98□□□□□ -0.33
CD9-209ENST00000540891 NSG2Q9Y328 171 aa12.98□□□□□ -0.33
CD9-209ENST00000540891 TEX50A0A1B0GTY4 177 aa12.97□□□□□ -0.33
CD9-209ENST00000540891 WI2-2373I1.2A0A1W2PRP0 233 aa12.97□□□□□ -0.33
CD9-209ENST00000540891 FAM223BA6NKX1 122 aa12.97□□□□□ -0.33
CD9-209ENST00000540891 DBX1A6NMT0 343 aa12.97□□□□□ -0.33
CD9-209ENST00000540891 H0Y980 276 aa12.97□□□□□ -0.33
CD9-209ENST00000540891 K7EIL1 84 aa12.97□□□□□ -0.33
CD9-209ENST00000540891 REG1AP05451 166 aa12.97□□□□□ -0.33
CD9-209ENST00000540891 CTSDP07339 412 aaPredicted RBP12.97□□□□□ -0.33
CD9-209ENST00000540891 CCDC190Q86UF4 302 aa12.97□□□□□ -0.33
CD9-209ENST00000540891 FAM223AQ8IWN6 122 aa12.97□□□□□ -0.33
CD9-209ENST00000540891 OR10W1Q8NGF6 305 aa12.97□□□□□ -0.33
CD9-209ENST00000540891 TRIM63Q969Q1 353 aa12.97□□□□□ -0.33
CD9-209ENST00000540891 DPPA5A6NC42 116 aa12.96□□□□□ -0.33
CD9-209ENST00000540891 DISC1C4P0D8 188 aa12.96□□□□□ -0.33
CD9-209ENST00000540891 NECAP1Q8NC96 275 aa12.96□□□□□ -0.33
CD9-209ENST00000540891 ZFAND1Q8TCF1 268 aa12.96□□□□□ -0.33
CD9-209ENST00000540891 MRAPQ8TCY5 172 aa12.96□□□□□ -0.33
CD9-209ENST00000540891 RTBDNQ9BSG5 229 aaPredicted RBP12.96□□□□□ -0.33
CD9-209ENST00000540891 THAP7Q9BT49 309 aaPredicted RBP12.96□□□□□ -0.33
CD9-209ENST00000540891 QTRT1Q9BXR0 403 aaKnown RBP12.96□□□□□ -0.33
CD9-209ENST00000540891 C5orf66Q9H5L9 145 aa12.96□□□□□ -0.33
CD9-209ENST00000540891 PEF1Q9UBV8 284 aaKnown RBP12.96□□□□□ -0.33
CD9-209ENST00000540891 DMRT1Q9Y5R6 373 aa12.96□□□□□ -0.33
CD9-209ENST00000540891 IGLV11-55A0A075B6I3 123 aa12.95□□□□□ -0.34
CD9-209ENST00000540891 C3orf85A0A1B0GTC6 90 aa12.95□□□□□ -0.34
CD9-209ENST00000540891 NDUFB8O95169 186 aa12.95□□□□□ -0.34
CD9-209ENST00000540891 ATP5G2Q06055 141 aa12.95□□□□□ -0.34
CD9-209ENST00000540891 EXOSC2Q13868 293 aaKnown RBP12.95□□□□□ -0.34
CD9-209ENST00000540891 C15orf32Q32M92 178 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms