RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 TTC9CQ8N5M4 171 aa14.12□□□□□ -0.15
SNRPA1-203ENST00000540017 DMBX1Q8NFW5 382 aa14.12□□□□□ -0.15
SNRPA1-203ENST00000540017 TERB2Q8NHR7 220 aa14.12□□□□□ -0.15
SNRPA1-203ENST00000540017 FYTTD1Q96QD9 318 aaKnown RBP14.12□□□□□ -0.15
SNRPA1-203ENST00000540017 AIFM2Q9BRQ8 373 aa14.12□□□□□ -0.15
SNRPA1-203ENST00000540017 MARCH11A6NNE9 402 aa14.11□□□□□ -0.15
SNRPA1-203ENST00000540017 KRASP01116 189 aa14.11□□□□□ -0.15
SNRPA1-203ENST00000540017 IGKV1-39P01597 117 aa14.11□□□□□ -0.15
SNRPA1-203ENST00000540017 IGKV1D-39P04432 117 aa14.11□□□□□ -0.15
SNRPA1-203ENST00000540017 OR8U8P0C7N1 319 aa14.11□□□□□ -0.15
SNRPA1-203ENST00000540017 AREGP15514 252 aa14.11□□□□□ -0.15
SNRPA1-203ENST00000540017 G6PCP35575 357 aa14.11□□□□□ -0.15
SNRPA1-203ENST00000540017 SLURP1P55000 103 aa14.11□□□□□ -0.15
SNRPA1-203ENST00000540017 SCGB2B2Q4G0G5 96 aa14.11□□□□□ -0.15
SNRPA1-203ENST00000540017 OR4C16Q8NGL9 310 aa14.11□□□□□ -0.15
SNRPA1-203ENST00000540017 DCUN1D4Q92564 292 aa14.11□□□□□ -0.15
SNRPA1-203ENST00000540017 DPF1Q92782 380 aa14.11□□□□□ -0.15
SNRPA1-203ENST00000540017 V9GYH0 126 aa14.11□□□□□ -0.15
SNRPA1-203ENST00000540017 TRBV9A0A0B4J1U6 114 aa14.1□□□□□ -0.15
SNRPA1-203ENST00000540017 C13orf42A0A1B0GVH6 325 aa14.1□□□□□ -0.15
SNRPA1-203ENST00000540017 ANKRD20A5PA0PJZ0 165 aa14.1□□□□□ -0.15
SNRPA1-203ENST00000540017 LINC01619G3V211 115 aa14.1□□□□□ -0.15
SNRPA1-203ENST00000540017 OR2B8PP59922 312 aa14.1□□□□□ -0.15
SNRPA1-203ENST00000540017 RND3P61587 244 aa14.1□□□□□ -0.15
SNRPA1-203ENST00000540017 OR13C8Q8NGS7 320 aa14.1□□□□□ -0.15
SNRPA1-203ENST00000540017 MARCH1Q8TCQ1 289 aa14.1□□□□□ -0.15
SNRPA1-203ENST00000540017 DLX4Q92988 240 aaPredicted RBP14.1□□□□□ -0.15
SNRPA1-203ENST00000540017 MCRIP2Q9BUT9 160 aaKnown RBP14.1□□□□□ -0.15
SNRPA1-203ENST00000540017 AKIP1Q9NQ31 210 aa14.1□□□□□ -0.15
SNRPA1-203ENST00000540017 AURKAIP1Q9NWT8 199 aaPredicted RBP14.1□□□□□ -0.15
SNRPA1-203ENST00000540017 A0A0G2JLM5 398 aa14.09□□□□□ -0.15
SNRPA1-203ENST00000540017 ANKRD34BA5PLL1 514 aa14.09□□□□□ -0.15
SNRPA1-203ENST00000540017 HSPB1P04792 205 aaKnown RBP14.09□□□□□ -0.15
SNRPA1-203ENST00000540017 AKAIN1P0CW23 69 aa14.09□□□□□ -0.15
SNRPA1-203ENST00000540017 S100GP29377 79 aa14.09□□□□□ -0.15
SNRPA1-203ENST00000540017 PIGPP57054 158 aa14.09□□□□□ -0.15
SNRPA1-203ENST00000540017 ERVK-16P61578 105 aa14.09□□□□□ -0.15
SNRPA1-203ENST00000540017 RHOGP84095 191 aa14.09□□□□□ -0.15
SNRPA1-203ENST00000540017 EGFEM1PQ0D2K5 195 aa14.09□□□□□ -0.15
SNRPA1-203ENST00000540017 MEF2DQ14814 521 aa14.09□□□□□ -0.15
SNRPA1-203ENST00000540017 ZNF486Q96H40 463 aaPredicted RBP14.09□□□□□ -0.15
SNRPA1-203ENST00000540017 FAM212BQ9NTI7 297 aaPredicted RBP14.09□□□□□ -0.15
SNRPA1-203ENST00000540017 NSG2Q9Y328 171 aa14.09□□□□□ -0.15
SNRPA1-203ENST00000540017 NPIPB5A8MRT5 1133 aa14.08□□□□□ -0.16
SNRPA1-203ENST00000540017 TRBV12-3P01733 135 aa14.08□□□□□ -0.16
SNRPA1-203ENST00000540017 REG1AP05451 166 aa14.08□□□□□ -0.16
SNRPA1-203ENST00000540017 PTBP1P26599 531 aaKnown RBP eCLIP14.08□□□□□ -0.16
SNRPA1-203ENST00000540017 ZNF79Q15937 498 aa14.08□□□□□ -0.16
SNRPA1-203ENST00000540017 ZNF343Q6P1L6 599 aa14.08□□□□□ -0.16
SNRPA1-203ENST00000540017 CCDC190Q86UF4 302 aa14.08□□□□□ -0.16
SNRPA1-203ENST00000540017 SEC22AQ96IW7 307 aa14.08□□□□□ -0.16
SNRPA1-203ENST00000540017 TP53RKQ96S44 253 aa14.08□□□□□ -0.16
SNRPA1-203ENST00000540017 ZNF257Q9Y2Q1 563 aa14.08□□□□□ -0.16
SNRPA1-203ENST00000540017 TEX50A0A1B0GTY4 177 aa14.07□□□□□ -0.16
SNRPA1-203ENST00000540017 IGLC7A0M8Q6 106 aa14.07□□□□□ -0.16
SNRPA1-203ENST00000540017 DBX1A6NMT0 343 aa14.07□□□□□ -0.16
SNRPA1-203ENST00000540017 SEC14L6B5MCN3 397 aa14.07□□□□□ -0.16
SNRPA1-203ENST00000540017 DISC1C4P0D8 188 aa14.07□□□□□ -0.16
SNRPA1-203ENST00000540017 CRYGCP07315 174 aa14.07□□□□□ -0.16
SNRPA1-203ENST00000540017 CTRB1P17538 263 aa14.07□□□□□ -0.16
SNRPA1-203ENST00000540017 PSMB6P28072 239 aa14.07□□□□□ -0.16
SNRPA1-203ENST00000540017 CTRB2Q6GPI1 263 aa14.07□□□□□ -0.16
SNRPA1-203ENST00000540017 SLC25A42Q86VD7 318 aa14.07□□□□□ -0.16
SNRPA1-203ENST00000540017 CADM3Q8N126 398 aa14.07□□□□□ -0.16
SNRPA1-203ENST00000540017 OR10W1Q8NGF6 305 aa14.07□□□□□ -0.16
SNRPA1-203ENST00000540017 OR51S1Q8NGJ8 323 aa14.07□□□□□ -0.16
SNRPA1-203ENST00000540017 ZFAND1Q8TCF1 268 aa14.07□□□□□ -0.16
SNRPA1-203ENST00000540017 USMG5Q96IX5 58 aa14.07□□□□□ -0.16
SNRPA1-203ENST00000540017 FANCD2OSQ96PS1 177 aa14.07□□□□□ -0.16
SNRPA1-203ENST00000540017 RTBDNQ9BSG5 229 aaPredicted RBP14.07□□□□□ -0.16
SNRPA1-203ENST00000540017 THAP7Q9BT49 309 aaPredicted RBP14.07□□□□□ -0.16
SNRPA1-203ENST00000540017 COMMD5Q9GZQ3 224 aa14.07□□□□□ -0.16
SNRPA1-203ENST00000540017 DPPA5A6NC42 116 aa14.06□□□□□ -0.16
SNRPA1-203ENST00000540017 OVOL1O14753 267 aa14.06□□□□□ -0.16
SNRPA1-203ENST00000540017 OR2J3O76001 311 aa14.06□□□□□ -0.16
SNRPA1-203ENST00000540017 CTSDP07339 412 aaPredicted RBP14.06□□□□□ -0.16
SNRPA1-203ENST00000540017 FGF2P09038 288 aa14.06□□□□□ -0.16
SNRPA1-203ENST00000540017 PYDC2Q56P42 97 aa14.06□□□□□ -0.16
SNRPA1-203ENST00000540017 TRIM63Q969Q1 353 aa14.06□□□□□ -0.16
SNRPA1-203ENST00000540017 GPR61Q9BZJ8 451 aa14.06□□□□□ -0.16
SNRPA1-203ENST00000540017 C3orf85A0A1B0GTC6 90 aa14.05□□□□□ -0.16
SNRPA1-203ENST00000540017 FAM223BA6NKX1 122 aa14.05□□□□□ -0.16
SNRPA1-203ENST00000540017 H0Y980 276 aa14.05□□□□□ -0.16
SNRPA1-203ENST00000540017 S100A5P33763 92 aa14.05□□□□□ -0.16
SNRPA1-203ENST00000540017 SP6Q3SY56 376 aa14.05□□□□□ -0.16
SNRPA1-203ENST00000540017 C9orf66Q5T8R8 295 aa14.05□□□□□ -0.16
SNRPA1-203ENST00000540017 REC114Q7Z4M0 266 aa14.05□□□□□ -0.16
SNRPA1-203ENST00000540017 FAM223AQ8IWN6 122 aa14.05□□□□□ -0.16
SNRPA1-203ENST00000540017 NECAP1Q8NC96 275 aa14.05□□□□□ -0.16
SNRPA1-203ENST00000540017 QTRT1Q9BXR0 403 aaKnown RBP14.05□□□□□ -0.16
SNRPA1-203ENST00000540017 RANGRFQ9HD47 186 aaPredicted RBP14.05□□□□□ -0.16
SNRPA1-203ENST00000540017 GPR132Q9UNW8 380 aa14.05□□□□□ -0.16
SNRPA1-203ENST00000540017 DMRT1Q9Y5R6 373 aa14.05□□□□□ -0.16
SNRPA1-203ENST00000540017 WI2-2373I1.2A0A1W2PRP0 233 aa14.04□□□□□ -0.16
SNRPA1-203ENST00000540017 NDUFB8O95169 186 aa14.04□□□□□ -0.16
SNRPA1-203ENST00000540017 SERPINE2P07093 398 aa14.04□□□□□ -0.16
SNRPA1-203ENST00000540017 ATP5G2Q06055 141 aa14.04□□□□□ -0.16
SNRPA1-203ENST00000540017 EXOSC2Q13868 293 aaKnown RBP14.04□□□□□ -0.16
SNRPA1-203ENST00000540017 KLF9Q13886 244 aaPredicted RBP14.04□□□□□ -0.16
SNRPA1-203ENST00000540017 IZUMO4Q1ZYL8 232 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms