RNA–Protein interactions for RNA: ENST00000533309.5

TRIM3-213, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 1,647 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-213ENST00000533309 SIGLEC9Q9Y336 463 aa12.75□□□□□ -0.37
TRIM3-213ENST00000533309 BOLA1Q9Y3E2 137 aa12.75□□□□□ -0.37
TRIM3-213ENST00000533309 MTORP42345 2549 aa12.75□□□□□ -0.37
TRIM3-213ENST00000533309 WRBO00258 174 aa12.74□□□□□ -0.37
TRIM3-213ENST00000533309 RRHO14718 337 aa12.74□□□□□ -0.37
TRIM3-213ENST00000533309 NBR2O15453 112 aa12.74□□□□□ -0.37
TRIM3-213ENST00000533309 CD5LO43866 347 aa12.74□□□□□ -0.37
TRIM3-213ENST00000533309 FBP1P09467 338 aa12.74□□□□□ -0.37
TRIM3-213ENST00000533309 RPL8P62917 257 aaKnown RBP12.74□□□□□ -0.37
TRIM3-213ENST00000533309 SPINK9Q5DT21 86 aa12.74□□□□□ -0.37
TRIM3-213ENST00000533309 C9orf139Q6ZV77 190 aa12.74□□□□□ -0.37
TRIM3-213ENST00000533309 BCL6BQ8N143 479 aaPredicted RBP12.74□□□□□ -0.37
TRIM3-213ENST00000533309 METTL1Q9UBP6 276 aaKnown RBP12.74□□□□□ -0.37
TRIM3-213ENST00000533309 TCF19Q9Y242 345 aa12.74□□□□□ -0.37
TRIM3-213ENST00000533309 FAM96BQ9Y3D0 163 aa12.74□□□□□ -0.37
TRIM3-213ENST00000533309 HIVEP1P15822 2718 aa12.74□□□□□ -0.37
TRIM3-213ENST00000533309 IFNA17P01571 189 aa12.73□□□□□ -0.37
TRIM3-213ENST00000533309 FGF2P09038 288 aa12.73□□□□□ -0.37
TRIM3-213ENST00000533309 FAM106CPP0CH98 169 aa12.73□□□□□ -0.37
TRIM3-213ENST00000533309 IAPPP10997 89 aa12.73□□□□□ -0.37
TRIM3-213ENST00000533309 TMEM11P17152 192 aa12.73□□□□□ -0.37
TRIM3-213ENST00000533309 SPCS3P61009 180 aa12.73□□□□□ -0.37
TRIM3-213ENST00000533309 HSPE1P61604 102 aaKnown RBP12.73□□□□□ -0.37
TRIM3-213ENST00000533309 PRSS8Q16651 343 aa12.73□□□□□ -0.37
TRIM3-213ENST00000533309 RAB40CQ96S21 281 aa12.73□□□□□ -0.37
TRIM3-213ENST00000533309 MFFQ9GZY8 342 aa12.73□□□□□ -0.37
TRIM3-213ENST00000533309 ZNF257Q9Y2Q1 563 aa12.73□□□□□ -0.37
TRIM3-213ENST00000533309 HSPB11Q9Y547 144 aa12.73□□□□□ -0.37
TRIM3-213ENST00000533309 OR51B2Q9Y5P1 312 aa12.73□□□□□ -0.37
TRIM3-213ENST00000533309 TEX50A0A1B0GTY4 177 aa12.73□□□□□ -0.37
TRIM3-213ENST00000533309 MDFIC2A0A1B0GVS7 189 aa12.73□□□□□ -0.37
TRIM3-213ENST00000533309 HKR1P10072 659 aa12.73□□□□□ -0.37
TRIM3-213ENST00000533309 SSBP2P81877 361 aaPredicted RBP12.73□□□□□ -0.37
TRIM3-213ENST00000533309 ZNF345Q14585 488 aa12.73□□□□□ -0.37
TRIM3-213ENST00000533309 C10orf55Q5SWW7 151 aa12.73□□□□□ -0.37
TRIM3-213ENST00000533309 PPP1R27Q86WC6 154 aa12.73□□□□□ -0.37
TRIM3-213ENST00000533309 DTD1Q8TEA8 209 aa12.73□□□□□ -0.37
TRIM3-213ENST00000533309 C22orf15Q8WYQ4 148 aa12.73□□□□□ -0.37
TRIM3-213ENST00000533309 AQP10Q96PS8 301 aa12.73□□□□□ -0.37
TRIM3-213ENST00000533309 CGB1A6NKQ9 187 aa12.72□□□□□ -0.37
TRIM3-213ENST00000533309 E7EUB6 86 aa12.72□□□□□ -0.37
TRIM3-213ENST00000533309 MED6O75586 246 aa12.72□□□□□ -0.37
TRIM3-213ENST00000533309 OR2F2O95006 317 aa12.72□□□□□ -0.37
TRIM3-213ENST00000533309 PVALBP20472 110 aaPredicted RBP12.72□□□□□ -0.37
TRIM3-213ENST00000533309 P2RY1P47900 373 aa12.72□□□□□ -0.37
TRIM3-213ENST00000533309 LRRC75BQ2VPJ9 315 aa12.72□□□□□ -0.37
TRIM3-213ENST00000533309 DEFB112Q30KQ8 113 aa12.72□□□□□ -0.37
TRIM3-213ENST00000533309 ACOT7LQ6ZUV0 252 aa12.72□□□□□ -0.37
TRIM3-213ENST00000533309 MMD2Q8IY49 270 aa12.72□□□□□ -0.37
TRIM3-213ENST00000533309 OR5B3Q8NH48 314 aa12.72□□□□□ -0.37
TRIM3-213ENST00000533309 SMIM8Q96KF7 97 aa12.72□□□□□ -0.37
TRIM3-213ENST00000533309 SSX3Q99909 188 aa12.72□□□□□ -0.37
TRIM3-213ENST00000533309 LYRM2Q9NU23 88 aaPredicted RBP12.72□□□□□ -0.37
TRIM3-213ENST00000533309 FKBP11Q9NYL4 201 aa12.72□□□□□ -0.37
TRIM3-213ENST00000533309 CACFD1Q9UGQ2 172 aa12.72□□□□□ -0.37
TRIM3-213ENST00000533309 WSB1Q9Y6I7 421 aa12.72□□□□□ -0.37
TRIM3-213ENST00000533309 A0A1B0GW64 132 aa12.71□□□□□ -0.37
TRIM3-213ENST00000533309 IGSF23A1L1A6 192 aa12.71□□□□□ -0.37
TRIM3-213ENST00000533309 CEBPZOSA8MTT3 80 aa12.71□□□□□ -0.37
TRIM3-213ENST00000533309 H3BP45 60 aa12.71□□□□□ -0.37
TRIM3-213ENST00000533309 L7N2F9 121 aa12.71□□□□□ -0.37
TRIM3-213ENST00000533309 FCN1O00602 326 aa12.71□□□□□ -0.37
TRIM3-213ENST00000533309 OPN1MWP04001 364 aa12.71□□□□□ -0.37
TRIM3-213ENST00000533309 OPN1MW2P0DN77 364 aa12.71□□□□□ -0.37
TRIM3-213ENST00000533309 OPN1MW3P0DN78 364 aa12.71□□□□□ -0.37
TRIM3-213ENST00000533309 VDAC2P45880 294 aaPredicted RBP12.71□□□□□ -0.37
TRIM3-213ENST00000533309 AP2S1P53680 142 aaPredicted RBP12.71□□□□□ -0.37
TRIM3-213ENST00000533309 VAMP2P63027 116 aa12.71□□□□□ -0.37
TRIM3-213ENST00000533309 PRCDQ00LT1 54 aa12.71□□□□□ -0.37
TRIM3-213ENST00000533309 C5orf64Q2M2E5 130 aa12.71□□□□□ -0.37
TRIM3-213ENST00000533309 OR2C3Q8N628 320 aa12.71□□□□□ -0.37
TRIM3-213ENST00000533309 INO80EQ8NBZ0 244 aaPredicted RBP12.71□□□□□ -0.37
TRIM3-213ENST00000533309 KIAA1456Q9P272 454 aa12.71□□□□□ -0.37
TRIM3-213ENST00000533309 FAM24AA6NFZ4 105 aa12.7□□□□□ -0.38
TRIM3-213ENST00000533309 RPL12P30050 165 aaKnown RBP12.7□□□□□ -0.38
TRIM3-213ENST00000533309 TAS2R30P59541 319 aa12.7□□□□□ -0.38
TRIM3-213ENST00000533309 OR2F1Q13607 317 aa12.7□□□□□ -0.38
TRIM3-213ENST00000533309 AANATQ16613 207 aa12.7□□□□□ -0.38
TRIM3-213ENST00000533309 IL17RELQ6ZVW7 336 aa12.7□□□□□ -0.38
TRIM3-213ENST00000533309 KCNRGQ8N5I3 272 aa12.7□□□□□ -0.38
TRIM3-213ENST00000533309 CLCC1Q96S66 551 aa12.7□□□□□ -0.38
TRIM3-213ENST00000533309 COMMD5Q9GZQ3 224 aa12.7□□□□□ -0.38
TRIM3-213ENST00000533309 NDUFA4L2Q9NRX3 87 aa12.7□□□□□ -0.38
TRIM3-213ENST00000533309 H3BUX3 64 aa12.7□□□□□ -0.38
TRIM3-213ENST00000533309 TSC22D2O75157 780 aa12.7□□□□□ -0.38
TRIM3-213ENST00000533309 MAS1LP35410 378 aa12.7□□□□□ -0.38
TRIM3-213ENST00000533309 COMPP49747 757 aaPredicted RBP12.7□□□□□ -0.38
TRIM3-213ENST00000533309 CAV2P51636 162 aa12.7□□□□□ -0.38
TRIM3-213ENST00000533309 PLGLAQ15195 96 aa12.7□□□□□ -0.38
TRIM3-213ENST00000533309 TMUB2Q71RG4 321 aa12.7□□□□□ -0.38
TRIM3-213ENST00000533309 TMEM252Q8N6L7 170 aa12.7□□□□□ -0.38
TRIM3-213ENST00000533309 Q8N9W7 124 aa12.7□□□□□ -0.38
TRIM3-213ENST00000533309 OR8H1Q8NGG4 311 aa12.7□□□□□ -0.38
TRIM3-213ENST00000533309 OR1L8Q8NGR8 309 aa12.7□□□□□ -0.38
TRIM3-213ENST00000533309 CIB3Q96Q77 187 aaPredicted RBP12.7□□□□□ -0.38
TRIM3-213ENST00000533309 HINT2Q9BX68 163 aa12.7□□□□□ -0.38
TRIM3-213ENST00000533309 PSENENQ9NZ42 101 aa12.7□□□□□ -0.38
TRIM3-213ENST00000533309 NCBP2LA6PVI3 153 aaKnown RBP12.69□□□□□ -0.38
TRIM3-213ENST00000533309 GPR137BO60478 399 aa12.69□□□□□ -0.38
TRIM3-213ENST00000533309 CA2P00918 260 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms