RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 FOXB2Q5VYV0 432 aa15.8■□□□□ 0.12
CCS-208ENST00000533244 CCDC190Q86UF4 302 aa15.8■□□□□ 0.12
CCS-208ENST00000533244 DMBX1Q8NFW5 382 aa15.8■□□□□ 0.12
CCS-208ENST00000533244 TRBV9A0A0B4J1U6 114 aa15.79■□□□□ 0.12
CCS-208ENST00000533244 A0A0G2JLM5 398 aa15.79■□□□□ 0.12
CCS-208ENST00000533244 HMX3A6NHT5 357 aa15.79■□□□□ 0.12
CCS-208ENST00000533244 WIPF1O43516 503 aa15.79■□□□□ 0.12
CCS-208ENST00000533244 RBMXL2O75526 392 aaKnown RBP15.79■□□□□ 0.12
CCS-208ENST00000533244 S100A5P33763 92 aa15.79■□□□□ 0.12
CCS-208ENST00000533244 ERVK-16P61578 105 aa15.79■□□□□ 0.12
CCS-208ENST00000533244 ZNF79Q15937 498 aa15.79■□□□□ 0.12
CCS-208ENST00000533244 SCGB2B2Q4G0G5 96 aa15.79■□□□□ 0.12
CCS-208ENST00000533244 GPR61Q9BZJ8 451 aa15.79■□□□□ 0.12
CCS-208ENST00000533244 NDUFA13Q9P0J0 144 aa15.79■□□□□ 0.12
CCS-208ENST00000533244 IGHV4OR15-8A0A075B7B6 117 aa15.78■□□□□ 0.12
CCS-208ENST00000533244 A0A087WW49 117 aa15.78■□□□□ 0.12
CCS-208ENST00000533244 NPIPB5A8MRT5 1133 aa15.78■□□□□ 0.12
CCS-208ENST00000533244 DISC1C4P0D8 188 aa15.78■□□□□ 0.12
CCS-208ENST00000533244 IGKV1-39P01597 117 aa15.78■□□□□ 0.12
CCS-208ENST00000533244 IGKV1D-39P04432 117 aa15.78■□□□□ 0.12
CCS-208ENST00000533244 PI3P19957 117 aa15.78■□□□□ 0.12
CCS-208ENST00000533244 PIGPP57054 158 aa15.78■□□□□ 0.12
CCS-208ENST00000533244 RAB25P57735 213 aa15.78■□□□□ 0.12
CCS-208ENST00000533244 OR2B8PP59922 312 aa15.78■□□□□ 0.12
CCS-208ENST00000533244 ZNF45Q02386 682 aa15.78■□□□□ 0.12
CCS-208ENST00000533244 SLC25A42Q86VD7 318 aa15.78■□□□□ 0.12
CCS-208ENST00000533244 OR13C8Q8NGS7 320 aa15.78■□□□□ 0.12
CCS-208ENST00000533244 ZFAND1Q8TCF1 268 aa15.78■□□□□ 0.12
CCS-208ENST00000533244 MARCH1Q8TCQ1 289 aa15.78■□□□□ 0.12
CCS-208ENST00000533244 TRIM63Q969Q1 353 aa15.78■□□□□ 0.12
CCS-208ENST00000533244 USMG5Q96IX5 58 aa15.78■□□□□ 0.12
CCS-208ENST00000533244 SLC2A8Q9NY64 477 aa15.78■□□□□ 0.12
CCS-208ENST00000533244 ZNF257Q9Y2Q1 563 aa15.78■□□□□ 0.12
CCS-208ENST00000533244 LINC01619G3V211 115 aa15.77■□□□□ 0.12
CCS-208ENST00000533244 KRASP01116 189 aa15.77■□□□□ 0.12
CCS-208ENST00000533244 HSPB1P04792 205 aaKnown RBP15.77■□□□□ 0.12
CCS-208ENST00000533244 CRYGCP07315 174 aa15.77■□□□□ 0.12
CCS-208ENST00000533244 CTSDP07339 412 aaPredicted RBP15.77■□□□□ 0.12
CCS-208ENST00000533244 RPA2P15927 270 aa15.77■□□□□ 0.12
CCS-208ENST00000533244 G6PCP35575 357 aa15.77■□□□□ 0.12
CCS-208ENST00000533244 ETV6P41212 452 aa15.77■□□□□ 0.12
CCS-208ENST00000533244 ECI1P42126 302 aa15.77■□□□□ 0.12
CCS-208ENST00000533244 EGFEM1PQ0D2K5 195 aa15.77■□□□□ 0.12
CCS-208ENST00000533244 SURF2Q15527 256 aaPredicted RBP15.77■□□□□ 0.12
CCS-208ENST00000533244 KLK9Q2XQG4 91 aa15.77■□□□□ 0.12
CCS-208ENST00000533244 DPF1Q92782 380 aa15.77■□□□□ 0.12
CCS-208ENST00000533244 FYTTD1Q96QD9 318 aaKnown RBP15.77■□□□□ 0.12
CCS-208ENST00000533244 THAP7Q9BT49 309 aaPredicted RBP15.77■□□□□ 0.12
CCS-208ENST00000533244 KLK9Q9UKQ9 250 aa15.77■□□□□ 0.12
CCS-208ENST00000533244 C13orf42A0A1B0GVH6 325 aa15.77■□□□□ 0.11
CCS-208ENST00000533244 DPPA5A6NC42 116 aa15.77■□□□□ 0.11
CCS-208ENST00000533244 H0Y980 276 aa15.77■□□□□ 0.11
CCS-208ENST00000533244 AREGP15514 252 aa15.77■□□□□ 0.11
CCS-208ENST00000533244 DEFA5Q01523 94 aa15.77■□□□□ 0.11
CCS-208ENST00000533244 PDLIM3Q53GG5 364 aaPredicted RBP15.77■□□□□ 0.11
CCS-208ENST00000533244 SEC22AQ96IW7 307 aa15.77■□□□□ 0.11
CCS-208ENST00000533244 SRSF8Q9BRL6 282 aaKnown RBP15.77■□□□□ 0.11
CCS-208ENST00000533244 IGLC7A0M8Q6 106 aa15.76■□□□□ 0.11
CCS-208ENST00000533244 FAM223BA6NKX1 122 aa15.76■□□□□ 0.11
CCS-208ENST00000533244 PRH1P02810 166 aa15.76■□□□□ 0.11
CCS-208ENST00000533244 CTRB1P17538 263 aa15.76■□□□□ 0.11
CCS-208ENST00000533244 PSMB6P28072 239 aa15.76■□□□□ 0.11
CCS-208ENST00000533244 CTRB2Q6GPI1 263 aa15.76■□□□□ 0.11
CCS-208ENST00000533244 ZNF343Q6P1L6 599 aa15.76■□□□□ 0.11
CCS-208ENST00000533244 FAM223AQ8IWN6 122 aa15.76■□□□□ 0.11
CCS-208ENST00000533244 TP53RKQ96S44 253 aa15.76■□□□□ 0.11
CCS-208ENST00000533244 PRRT1Q99946 306 aa15.76■□□□□ 0.11
CCS-208ENST00000533244 COMMD5Q9GZQ3 224 aa15.76■□□□□ 0.11
CCS-208ENST00000533244 AKIP1Q9NQ31 210 aa15.76■□□□□ 0.11
CCS-208ENST00000533244 SLURP1P55000 103 aa15.75■□□□□ 0.11
CCS-208ENST00000533244 RHOGP84095 191 aa15.75■□□□□ 0.11
CCS-208ENST00000533244 KLF9Q13886 244 aaPredicted RBP15.75■□□□□ 0.11
CCS-208ENST00000533244 PYDC2Q56P42 97 aa15.75■□□□□ 0.11
CCS-208ENST00000533244 THOC7Q6I9Y2 204 aaKnown RBP15.75■□□□□ 0.11
CCS-208ENST00000533244 C19orf35Q6ZS72 473 aa15.75■□□□□ 0.11
CCS-208ENST00000533244 REC114Q7Z4M0 266 aa15.75■□□□□ 0.11
CCS-208ENST00000533244 Q8N402 240 aa15.75■□□□□ 0.11
CCS-208ENST00000533244 CCDC71LQ8N9Z2 235 aa15.75■□□□□ 0.11
CCS-208ENST00000533244 OR51S1Q8NGJ8 323 aa15.75■□□□□ 0.11
CCS-208ENST00000533244 OR6Q1Q8NGQ2 317 aa15.75■□□□□ 0.11
CCS-208ENST00000533244 DCUN1D4Q92564 292 aa15.75■□□□□ 0.11
CCS-208ENST00000533244 RTBDNQ9BSG5 229 aaPredicted RBP15.75■□□□□ 0.11
CCS-208ENST00000533244 QTRT1Q9BXR0 403 aaKnown RBP15.75■□□□□ 0.11
CCS-208ENST00000533244 COPZ2Q9P299 210 aa15.75■□□□□ 0.11
CCS-208ENST00000533244 GPR132Q9UNW8 380 aa15.75■□□□□ 0.11
CCS-208ENST00000533244 C3orf85A0A1B0GTC6 90 aa15.74■□□□□ 0.11
CCS-208ENST00000533244 NECAP1Q8NC96 275 aa15.74■□□□□ 0.11
CCS-208ENST00000533244 DLX4Q92988 240 aaPredicted RBP15.74■□□□□ 0.11
CCS-208ENST00000533244 FANCD2OSQ96PS1 177 aa15.74■□□□□ 0.11
CCS-208ENST00000533244 TSC22D3Q99576 134 aa15.74■□□□□ 0.11
CCS-208ENST00000533244 C5orf66Q9H5L9 145 aa15.74■□□□□ 0.11
CCS-208ENST00000533244 RANGRFQ9HD47 186 aaPredicted RBP15.74■□□□□ 0.11
CCS-208ENST00000533244 TEX50A0A1B0GTY4 177 aa15.73■□□□□ 0.11
CCS-208ENST00000533244 PRB2P02812 416 aaPredicted RBP15.73■□□□□ 0.11
CCS-208ENST00000533244 SERPINE2P07093 398 aa15.73■□□□□ 0.11
CCS-208ENST00000533244 HOXD3P31249 432 aaPredicted RBP15.73■□□□□ 0.11
CCS-208ENST00000533244 KRTAP10-11P60412 298 aa15.73■□□□□ 0.11
CCS-208ENST00000533244 C9orf66Q5T8R8 295 aa15.73■□□□□ 0.11
CCS-208ENST00000533244 OR1L8Q8NGR8 309 aa15.73■□□□□ 0.11
CCS-208ENST00000533244 NDUFA4L2Q9NRX3 87 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms