RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 LCN12Q6JVE5 192 aa4.97□□□□□ -1.61
CD44-221ENST00000526000 LPCAT3Q6P1A2 487 aa4.97□□□□□ -1.61
CD44-221ENST00000526000 ZNF343Q6P1L6 599 aa4.97□□□□□ -1.61
CD44-221ENST00000526000 DHRS11Q6UWP2 260 aa4.97□□□□□ -1.61
CD44-221ENST00000526000 LINC00322Q6ZN03 302 aaPredicted RBP4.97□□□□□ -1.61
CD44-221ENST00000526000 IDO2Q6ZQW0 420 aa4.97□□□□□ -1.61
CD44-221ENST00000526000 C19orf35Q6ZS72 473 aa4.97□□□□□ -1.61
CD44-221ENST00000526000 MFSD4AQ8N468 514 aa4.97□□□□□ -1.61
CD44-221ENST00000526000 ZBTB34Q8NCN2 500 aa4.97□□□□□ -1.61
CD44-221ENST00000526000 IL17DQ8TAD2 202 aa4.97□□□□□ -1.61
CD44-221ENST00000526000 SNAPC3Q92966 411 aa4.97□□□□□ -1.61
CD44-221ENST00000526000 WDR89Q96FK6 387 aaPredicted RBP4.97□□□□□ -1.61
CD44-221ENST00000526000 SCGB3A2Q96PL1 93 aa4.97□□□□□ -1.61
CD44-221ENST00000526000 RNF5Q99942 180 aa4.97□□□□□ -1.61
CD44-221ENST00000526000 THAP7Q9BT49 309 aaPredicted RBP4.97□□□□□ -1.61
CD44-221ENST00000526000 TINAGL1Q9GZM7 467 aaPredicted RBP4.97□□□□□ -1.61
CD44-221ENST00000526000 ZNF230Q9UIE0 474 aaPredicted RBP4.97□□□□□ -1.61
CD44-221ENST00000526000 ELF5Q9UKW6 265 aaPredicted RBP4.97□□□□□ -1.61
CD44-221ENST00000526000 BOLA1Q9Y3E2 137 aa4.97□□□□□ -1.61
CD44-221ENST00000526000 OR2W1Q9Y3N9 320 aa4.97□□□□□ -1.61
CD44-221ENST00000526000 DNAH1Q9P2D7 4330 aa4.96□□□□□ -1.62
CD44-221ENST00000526000 IGKV1-6A0A0C4DH72 117 aa4.96□□□□□ -1.62
CD44-221ENST00000526000 ANKRD20A5PA0PJZ0 165 aa4.96□□□□□ -1.62
CD44-221ENST00000526000 CXorf65A6NEN9 183 aa4.96□□□□□ -1.62
CD44-221ENST00000526000 CENPXA8MT69 81 aa4.96□□□□□ -1.62
CD44-221ENST00000526000 DISC1C4P0D8 188 aa4.96□□□□□ -1.62
CD44-221ENST00000526000 PPP5D1E7EU14 171 aa4.96□□□□□ -1.62
CD44-221ENST00000526000 BMPR1BO00238 502 aa4.96□□□□□ -1.62
CD44-221ENST00000526000 BET1O15155 118 aa4.96□□□□□ -1.62
CD44-221ENST00000526000 OR2J3O76001 311 aa4.96□□□□□ -1.62
CD44-221ENST00000526000 SCAF4O95104 1147 aaKnown RBP4.96□□□□□ -1.62
CD44-221ENST00000526000 FCER2P06734 321 aa4.96□□□□□ -1.62
CD44-221ENST00000526000 CRYGBP07316 175 aa4.96□□□□□ -1.62
CD44-221ENST00000526000 S100GP29377 79 aa4.96□□□□□ -1.62
CD44-221ENST00000526000 HRH1P35367 487 aa4.96□□□□□ -1.62
CD44-221ENST00000526000 INPP1P49441 399 aa4.96□□□□□ -1.62
CD44-221ENST00000526000 MECP2P51608 486 aaKnown RBP4.96□□□□□ -1.62
CD44-221ENST00000526000 UCP3P55916 312 aa4.96□□□□□ -1.62
CD44-221ENST00000526000 HERV-K104P61576 105 aa4.96□□□□□ -1.62
CD44-221ENST00000526000 TSPAN5P62079 268 aa4.96□□□□□ -1.62
CD44-221ENST00000526000 RHOGP84095 191 aa4.96□□□□□ -1.62
CD44-221ENST00000526000 SURF2Q15527 256 aaPredicted RBP4.96□□□□□ -1.62
CD44-221ENST00000526000 DEFB114Q30KQ6 69 aa4.96□□□□□ -1.62
CD44-221ENST00000526000 IGSF11Q5DX21 431 aa4.96□□□□□ -1.62
CD44-221ENST00000526000 C10orf55Q5SWW7 151 aa4.96□□□□□ -1.62
CD44-221ENST00000526000 STEAP1BQ6NZ63 245 aa4.96□□□□□ -1.62
CD44-221ENST00000526000 LYSMD2Q8IV50 215 aa4.96□□□□□ -1.62
CD44-221ENST00000526000 H1FOOQ8IZA3 346 aaPredicted RBP4.96□□□□□ -1.62
CD44-221ENST00000526000 TOMM5Q8N4H5 51 aa4.96□□□□□ -1.62
CD44-221ENST00000526000 GVQW1Q8N7I0 195 aa4.96□□□□□ -1.62
CD44-221ENST00000526000 OR6F1Q8NGZ6 308 aa4.96□□□□□ -1.62
CD44-221ENST00000526000 CACNG8Q8WXS5 425 aa4.96□□□□□ -1.62
CD44-221ENST00000526000 MAFIPQ8WZ33 124 aa4.96□□□□□ -1.62
CD44-221ENST00000526000 TRIM63Q969Q1 353 aa4.96□□□□□ -1.62
CD44-221ENST00000526000 ZNF486Q96H40 463 aaPredicted RBP4.96□□□□□ -1.62
CD44-221ENST00000526000 ADTRPQ96IZ2 230 aa4.96□□□□□ -1.62
CD44-221ENST00000526000 HARBI1Q96MB7 349 aa4.96□□□□□ -1.62
CD44-221ENST00000526000 PRRT1Q99946 306 aa4.96□□□□□ -1.62
CD44-221ENST00000526000 ZC4H2Q9NQZ6 224 aa4.96□□□□□ -1.62
CD44-221ENST00000526000 SLC2A8Q9NY64 477 aa4.96□□□□□ -1.62
CD44-221ENST00000526000 RDH8Q9NYR8 311 aa4.96□□□□□ -1.62
CD44-221ENST00000526000 EHFQ9NZC4 300 aa4.96□□□□□ -1.62
CD44-221ENST00000526000 KLK11Q9UBX7 282 aa4.96□□□□□ -1.62
CD44-221ENST00000526000 SCP2D1Q9UJQ7 156 aa4.96□□□□□ -1.62
CD44-221ENST00000526000 RBM7Q9Y580 266 aaKnown RBP4.96□□□□□ -1.62
CD44-221ENST00000526000 DNAH7Q8WXX0 4024 aa4.96□□□□□ -1.62
CD44-221ENST00000526000 IGKV1D-8A0A087WSZ0 117 aa4.95□□□□□ -1.62
CD44-221ENST00000526000 PIGBOS1A0A0B4J2F0 54 aa4.95□□□□□ -1.62
CD44-221ENST00000526000 ZNF320A2RRD8 509 aa4.95□□□□□ -1.62
CD44-221ENST00000526000 HMX3A6NHT5 357 aa4.95□□□□□ -1.62
CD44-221ENST00000526000 H3BUA1 57 aa4.95□□□□□ -1.62
CD44-221ENST00000526000 B3GALNT1O75752 331 aa4.95□□□□□ -1.62
CD44-221ENST00000526000 RAB3DO95716 219 aa4.95□□□□□ -1.62
CD44-221ENST00000526000 PPYP01298 95 aa4.95□□□□□ -1.62
CD44-221ENST00000526000 CD3DP04234 171 aa4.95□□□□□ -1.62
CD44-221ENST00000526000 OR9G9P0C7N8 305 aa4.95□□□□□ -1.62
CD44-221ENST00000526000 PTHLHP12272 177 aa4.95□□□□□ -1.62
CD44-221ENST00000526000 FOLR2P14207 255 aa4.95□□□□□ -1.62
CD44-221ENST00000526000 AADACP22760 399 aa4.95□□□□□ -1.62
CD44-221ENST00000526000 HLA-DMAP28067 261 aa4.95□□□□□ -1.62
CD44-221ENST00000526000 FCGR2CP31995 323 aa4.95□□□□□ -1.62
CD44-221ENST00000526000 EWSR1Q01844 656 aaKnown RBP eCLIP4.95□□□□□ -1.62
CD44-221ENST00000526000 EXOSC2Q13868 293 aaKnown RBP4.95□□□□□ -1.62
CD44-221ENST00000526000 KLF9Q13886 244 aaPredicted RBP4.95□□□□□ -1.62
CD44-221ENST00000526000 MRGPRG-AS1Q2M3A8 158 aa4.95□□□□□ -1.62
CD44-221ENST00000526000 PDPNQ86YL7 162 aa4.95□□□□□ -1.62
CD44-221ENST00000526000 ZNF645Q8N7E2 425 aa4.95□□□□□ -1.62
CD44-221ENST00000526000 ADAD2Q8NCV1 583 aaKnown RBP4.95□□□□□ -1.62
CD44-221ENST00000526000 TERB2Q8NHR7 220 aa4.95□□□□□ -1.62
CD44-221ENST00000526000 MOB3AQ96BX8 217 aa4.95□□□□□ -1.62
CD44-221ENST00000526000 C5orf30Q96GV9 206 aa4.95□□□□□ -1.62
CD44-221ENST00000526000 USMG5Q96IX5 58 aa4.95□□□□□ -1.62
CD44-221ENST00000526000 OR2D2Q9H210 308 aa4.95□□□□□ -1.62
CD44-221ENST00000526000 SDHAF2Q9NX18 166 aa4.95□□□□□ -1.62
CD44-221ENST00000526000 PEMTQ9UBM1 199 aa4.95□□□□□ -1.62
CD44-221ENST00000526000 STARD9Q9P2P6 4700 aa4.94□□□□□ -1.62
CD44-221ENST00000526000 IGHV3-35A0A0C4DH35 117 aa4.94□□□□□ -1.62
CD44-221ENST00000526000 A0A0J9YWU9 116 aa4.94□□□□□ -1.62
CD44-221ENST00000526000 MEIS3P1A6NDR6 274 aa4.94□□□□□ -1.62
CD44-221ENST00000526000 C2orf70A6NJV1 201 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms