RNA–Protein interactions for RNA: ENST00000515144.5

TRIO-222, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene TRIO, Length 7,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-222ENST00000515144 MMP9P14780 707 aa12.15□□□□□ -0.47
TRIO-222ENST00000515144 HNRNPA3P51991 378 aaKnown RBP12.15□□□□□ -0.47
TRIO-222ENST00000515144 PRSS8Q16651 343 aa12.15□□□□□ -0.47
TRIO-222ENST00000515144 PQLC2Q6ZP29 291 aa12.15□□□□□ -0.47
TRIO-222ENST00000515144 C3orf56Q8N813 242 aa12.15□□□□□ -0.47
TRIO-222ENST00000515144 GPX7Q96SL4 187 aaPredicted RBP12.15□□□□□ -0.47
TRIO-222ENST00000515144 SEC11CQ9BY50 192 aa12.15□□□□□ -0.47
TRIO-222ENST00000515144 TGOLN2O43493 480 aa12.14□□□□□ -0.47
TRIO-222ENST00000515144 PTBP3O95758 552 aaKnown RBP12.14□□□□□ -0.47
TRIO-222ENST00000515144 SRSF9Q13242 221 aaKnown RBP eCLIP12.14□□□□□ -0.47
TRIO-222ENST00000515144 LINC00299Q6ZSB3 139 aa12.14□□□□□ -0.47
TRIO-222ENST00000515144 LHFPL4Q7Z7J7 247 aa12.14□□□□□ -0.47
TRIO-222ENST00000515144 NPFFR1Q9GZQ6 430 aa12.14□□□□□ -0.47
TRIO-222ENST00000515144 DNAJC4Q9NNZ3 241 aa12.14□□□□□ -0.47
TRIO-222ENST00000515144 CKS2P33552 79 aa12.14□□□□□ -0.47
TRIO-222ENST00000515144 IGLV3-21P80748 117 aaPredicted RBP12.14□□□□□ -0.47
TRIO-222ENST00000515144 LDLRAD2Q5SZI1 272 aa12.14□□□□□ -0.47
TRIO-222ENST00000515144 DSCAMO60469 2012 aa12.14□□□□□ -0.47
TRIO-222ENST00000515144 TMEM45BQ96B21 275 aa12.14□□□□□ -0.47
TRIO-222ENST00000515144 CACNA1HO95180 2353 aa12.14□□□□□ -0.47
TRIO-222ENST00000515144 CBY3A6NI87 242 aa12.14□□□□□ -0.47
TRIO-222ENST00000515144 MDKP21741 143 aaPredicted RBP12.14□□□□□ -0.47
TRIO-222ENST00000515144 ZNF525Q8N782 197 aa12.14□□□□□ -0.47
TRIO-222ENST00000515144 ANOS1P23352 680 aa12.14□□□□□ -0.47
TRIO-222ENST00000515144 NUTF2P61970 127 aaKnown RBP12.14□□□□□ -0.47
TRIO-222ENST00000515144 GOLT1AQ6ZVE7 132 aa12.14□□□□□ -0.47
TRIO-222ENST00000515144 OR13A1Q8NGR1 328 aa12.14□□□□□ -0.47
TRIO-222ENST00000515144 Q96M66 194 aa12.14□□□□□ -0.47
TRIO-222ENST00000515144 JMJD8Q96S16 334 aa12.14□□□□□ -0.47
TRIO-222ENST00000515144 FUT9Q9Y231 359 aa12.14□□□□□ -0.47
TRIO-222ENST00000515144 COX5BP10606 129 aa12.14□□□□□ -0.47
TRIO-222ENST00000515144 CD33P20138 364 aa12.14□□□□□ -0.47
TRIO-222ENST00000515144 HIST3H3Q16695 136 aa12.14□□□□□ -0.47
TRIO-222ENST00000515144 MBNL2Q5VZF2 373 aaKnown RBP12.14□□□□□ -0.47
TRIO-222ENST00000515144 GTF3AQ92664 365 aaKnown RBP12.14□□□□□ -0.47
TRIO-222ENST00000515144 OR10C1Q96KK4 312 aa12.14□□□□□ -0.47
TRIO-222ENST00000515144 SH3BGRL3Q9H299 93 aa12.14□□□□□ -0.47
TRIO-222ENST00000515144 OPN4Q9UHM6 478 aa12.14□□□□□ -0.47
TRIO-222ENST00000515144 NPFFO15130 113 aa12.13□□□□□ -0.47
TRIO-222ENST00000515144 ZNF253O75346 499 aa12.13□□□□□ -0.47
TRIO-222ENST00000515144 C1QL1O75973 258 aa12.13□□□□□ -0.47
TRIO-222ENST00000515144 VMO1Q7Z5L0 202 aa12.13□□□□□ -0.47
TRIO-222ENST00000515144 LSM10Q969L4 123 aaKnown RBP12.13□□□□□ -0.47
TRIO-222ENST00000515144 DUXBA0A1W2PPF3 345 aa12.13□□□□□ -0.47
TRIO-222ENST00000515144 RNF223E7ERA6 249 aa12.13□□□□□ -0.47
TRIO-222ENST00000515144 RELBQ01201 579 aa12.13□□□□□ -0.47
TRIO-222ENST00000515144 OR10D4PQ8NGN7 298 aa12.13□□□□□ -0.47
TRIO-222ENST00000515144 FGFBP3Q8TAT2 258 aa12.13□□□□□ -0.47
TRIO-222ENST00000515144 HKR1P10072 659 aa12.13□□□□□ -0.47
TRIO-222ENST00000515144 CRISP2P16562 243 aa12.13□□□□□ -0.47
TRIO-222ENST00000515144 SIGLEC5O15389 551 aa12.13□□□□□ -0.47
TRIO-222ENST00000515144 HERVK_113P61574 105 aa12.13□□□□□ -0.47
TRIO-222ENST00000515144 KIR3DL3Q8N743 410 aa12.13□□□□□ -0.47
TRIO-222ENST00000515144 OR51G1Q8NGK1 321 aa12.13□□□□□ -0.47
TRIO-222ENST00000515144 MOB4Q9Y3A3 225 aa12.13□□□□□ -0.47
TRIO-222ENST00000515144 CHRNA10Q9GZZ6 450 aa12.13□□□□□ -0.47
TRIO-222ENST00000515144 TMEM222Q9H0R3 208 aa12.13□□□□□ -0.47
TRIO-222ENST00000515144 C5orf52A6NGY3 159 aa12.13□□□□□ -0.47
TRIO-222ENST00000515144 ISLRO14498 428 aa12.13□□□□□ -0.47
TRIO-222ENST00000515144 TOLLIPQ9H0E2 274 aa12.13□□□□□ -0.47
TRIO-222ENST00000515144 CLDN34H7C241 214 aa12.12□□□□□ -0.47
TRIO-222ENST00000515144 MPDU1O75352 247 aa12.12□□□□□ -0.47
TRIO-222ENST00000515144 PRSS22Q9GZN4 317 aa12.12□□□□□ -0.47
TRIO-222ENST00000515144 C10orf128Q5T292 105 aa12.12□□□□□ -0.47
TRIO-222ENST00000515144 DHRS11Q6UWP2 260 aa12.12□□□□□ -0.47
TRIO-222ENST00000515144 NEUROG1Q92886 237 aa12.12□□□□□ -0.47
TRIO-222ENST00000515144 OBSL1O75147 1896 aa12.12□□□□□ -0.47
TRIO-222ENST00000515144 HSPE1P61604 102 aaKnown RBP12.12□□□□□ -0.47
TRIO-222ENST00000515144 CDS2O95674 445 aa12.12□□□□□ -0.47
TRIO-222ENST00000515144 HLA-DRB5Q30154 266 aa12.12□□□□□ -0.47
TRIO-222ENST00000515144 FSTP19883 344 aa12.12□□□□□ -0.47
TRIO-222ENST00000515144 Q96MF0 132 aa12.12□□□□□ -0.47
TRIO-222ENST00000515144 A0A0G2JK05 382 aa12.12□□□□□ -0.47
TRIO-222ENST00000515144 FOXG1P55316 489 aaPredicted RBP12.12□□□□□ -0.47
TRIO-222ENST00000515144 ZNF672Q499Z4 452 aaPredicted RBP12.12□□□□□ -0.47
TRIO-222ENST00000515144 OR4A47Q6IF82 309 aa12.12□□□□□ -0.47
TRIO-222ENST00000515144 FAM166AQ6J272 317 aa12.12□□□□□ -0.47
TRIO-222ENST00000515144 SLC16A13Q7RTY0 426 aa12.12□□□□□ -0.47
TRIO-222ENST00000515144 LHFPL5Q8TAF8 219 aa12.12□□□□□ -0.47
TRIO-222ENST00000515144 SRSF12Q8WXF0 261 aaKnown RBP12.12□□□□□ -0.47
TRIO-222ENST00000515144 TP53RKQ96S44 253 aa12.12□□□□□ -0.47
TRIO-222ENST00000515144 SAXO1Q8IYX7 474 aa12.11□□□□□ -0.47
TRIO-222ENST00000515144 SSC4DQ8WTU2 575 aa12.11□□□□□ -0.47
TRIO-222ENST00000515144 TNCP24821 2201 aa12.11□□□□□ -0.47
TRIO-222ENST00000515144 IGKV3D-20A0A0C4DH25 116 aa12.11□□□□□ -0.47
TRIO-222ENST00000515144 CTXND1A0A1B0GTU2 59 aa12.11□□□□□ -0.47
TRIO-222ENST00000515144 ICAM4Q14773 271 aa12.11□□□□□ -0.47
TRIO-222ENST00000515144 OR51M1Q9H341 326 aa12.11□□□□□ -0.47
TRIO-222ENST00000515144 MED12LQ86YW9 2145 aa12.11□□□□□ -0.47
TRIO-222ENST00000515144 TRAV30A0A087WSZ9 112 aa12.11□□□□□ -0.47
TRIO-222ENST00000515144 HOXA6P31267 233 aa12.11□□□□□ -0.47
TRIO-222ENST00000515144 NMUP48645 174 aa12.11□□□□□ -0.47
TRIO-222ENST00000515144 ANAPC16Q96DE5 110 aa12.11□□□□□ -0.47
TRIO-222ENST00000515144 TCF19Q9Y242 345 aa12.11□□□□□ -0.47
TRIO-222ENST00000515144 ALX3O95076 343 aa12.11□□□□□ -0.47
TRIO-222ENST00000515144 PGA5P0DJD9 388 aa12.11□□□□□ -0.47
TRIO-222ENST00000515144 FLVCR1-AS1Q8TAF5 88 aa12.11□□□□□ -0.47
TRIO-222ENST00000515144 NCOA6Q14686 2063 aaPredicted RBP12.11□□□□□ -0.47
TRIO-222ENST00000515144 A0A0G2JLM5 398 aa12.11□□□□□ -0.47
TRIO-222ENST00000515144 M0R381 172 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms