RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 CCDC190Q86UF4 302 aa9.06□□□□□ -0.96
HMGXB3-203ENST00000510472 USMG5Q96IX5 58 aa9.06□□□□□ -0.96
HMGXB3-203ENST00000510472 TMEM140Q9NV12 185 aa9.06□□□□□ -0.96
HMGXB3-203ENST00000510472 V9GYH0 126 aa9.06□□□□□ -0.96
HMGXB3-203ENST00000510472 IGHV4OR15-8A0A075B7B6 117 aa9.05□□□□□ -0.96
HMGXB3-203ENST00000510472 A0A087WW49 117 aa9.05□□□□□ -0.96
HMGXB3-203ENST00000510472 A0A0G2JLM5 398 aa9.05□□□□□ -0.96
HMGXB3-203ENST00000510472 MARCH11A6NNE9 402 aa9.05□□□□□ -0.96
HMGXB3-203ENST00000510472 NPIPB5A8MRT5 1133 aa9.05□□□□□ -0.96
HMGXB3-203ENST00000510472 IGHV3-11P01762 117 aa9.05□□□□□ -0.96
HMGXB3-203ENST00000510472 HSPB1P04792 205 aaKnown RBP9.05□□□□□ -0.96
HMGXB3-203ENST00000510472 OR8U8P0C7N1 319 aa9.05□□□□□ -0.96
HMGXB3-203ENST00000510472 PI3P19957 117 aa9.05□□□□□ -0.96
HMGXB3-203ENST00000510472 ETV6P41212 452 aa9.05□□□□□ -0.96
HMGXB3-203ENST00000510472 MEF2DQ14814 521 aa9.05□□□□□ -0.96
HMGXB3-203ENST00000510472 ZNF343Q6P1L6 599 aa9.05□□□□□ -0.96
HMGXB3-203ENST00000510472 DCUN1D4Q92564 292 aa9.05□□□□□ -0.96
HMGXB3-203ENST00000510472 DLX4Q92988 240 aaPredicted RBP9.05□□□□□ -0.96
HMGXB3-203ENST00000510472 SEC22AQ96IW7 307 aa9.05□□□□□ -0.96
HMGXB3-203ENST00000510472 FANCD2OSQ96PS1 177 aa9.05□□□□□ -0.96
HMGXB3-203ENST00000510472 PHB2Q99623 299 aa9.05□□□□□ -0.96
HMGXB3-203ENST00000510472 HRASLSQ9HDD0 168 aa9.05□□□□□ -0.96
HMGXB3-203ENST00000510472 ZNF355PQ9NSJ1 428 aa9.05□□□□□ -0.96
HMGXB3-203ENST00000510472 TEX50A0A1B0GTY4 177 aa9.04□□□□□ -0.96
HMGXB3-203ENST00000510472 IGLC7A0M8Q6 106 aa9.04□□□□□ -0.96
HMGXB3-203ENST00000510472 LINC01619G3V211 115 aa9.04□□□□□ -0.96
HMGXB3-203ENST00000510472 KRASP01116 189 aa9.04□□□□□ -0.96
HMGXB3-203ENST00000510472 PRH1P02810 166 aa9.04□□□□□ -0.96
HMGXB3-203ENST00000510472 PRB2P02812 416 aaPredicted RBP9.04□□□□□ -0.96
HMGXB3-203ENST00000510472 AREGP15514 252 aa9.04□□□□□ -0.96
HMGXB3-203ENST00000510472 CTRB1P17538 263 aa9.04□□□□□ -0.96
HMGXB3-203ENST00000510472 PSMB6P28072 239 aa9.04□□□□□ -0.96
HMGXB3-203ENST00000510472 S100GP29377 79 aa9.04□□□□□ -0.96
HMGXB3-203ENST00000510472 G6PCP35575 357 aa9.04□□□□□ -0.96
HMGXB3-203ENST00000510472 PIGPP57054 158 aa9.04□□□□□ -0.96
HMGXB3-203ENST00000510472 ZNF79Q15937 498 aa9.04□□□□□ -0.96
HMGXB3-203ENST00000510472 CTRB2Q6GPI1 263 aa9.04□□□□□ -0.96
HMGXB3-203ENST00000510472 FAAP20Q6NZ36 180 aa9.04□□□□□ -0.96
HMGXB3-203ENST00000510472 SLC25A42Q86VD7 318 aa9.04□□□□□ -0.96
HMGXB3-203ENST00000510472 DMBX1Q8NFW5 382 aa9.04□□□□□ -0.96
HMGXB3-203ENST00000510472 OR4C16Q8NGL9 310 aa9.04□□□□□ -0.96
HMGXB3-203ENST00000510472 OR13C8Q8NGS7 320 aa9.04□□□□□ -0.96
HMGXB3-203ENST00000510472 SRSF8Q9BRL6 282 aaKnown RBP9.04□□□□□ -0.96
HMGXB3-203ENST00000510472 RTBDNQ9BSG5 229 aaPredicted RBP9.04□□□□□ -0.96
HMGXB3-203ENST00000510472 THAP7Q9BT49 309 aaPredicted RBP9.04□□□□□ -0.96
HMGXB3-203ENST00000510472 GPR61Q9BZJ8 451 aa9.04□□□□□ -0.96
HMGXB3-203ENST00000510472 AKIP1Q9NQ31 210 aa9.04□□□□□ -0.96
HMGXB3-203ENST00000510472 AURKAIP1Q9NWT8 199 aaPredicted RBP9.04□□□□□ -0.96
HMGXB3-203ENST00000510472 SLC2A8Q9NY64 477 aa9.04□□□□□ -0.96
HMGXB3-203ENST00000510472 COA4Q9NYJ1 87 aa9.04□□□□□ -0.96
HMGXB3-203ENST00000510472 ZNF257Q9Y2Q1 563 aa9.04□□□□□ -0.96
HMGXB3-203ENST00000510472 C13orf42A0A1B0GVH6 325 aa9.03□□□□□ -0.96
HMGXB3-203ENST00000510472 DPPA5A6NC42 116 aa9.03□□□□□ -0.96
HMGXB3-203ENST00000510472 FAM223BA6NKX1 122 aa9.03□□□□□ -0.96
HMGXB3-203ENST00000510472 H0Y980 276 aa9.03□□□□□ -0.96
HMGXB3-203ENST00000510472 CTSDP07339 412 aaPredicted RBP9.03□□□□□ -0.96
HMGXB3-203ENST00000510472 P0C879 139 aa9.03□□□□□ -0.96
HMGXB3-203ENST00000510472 AKAIN1P0CW23 69 aa9.03□□□□□ -0.96
HMGXB3-203ENST00000510472 PGAM2P15259 253 aa9.03□□□□□ -0.96
HMGXB3-203ENST00000510472 RPA2P15927 270 aa9.03□□□□□ -0.96
HMGXB3-203ENST00000510472 SLURP1P55000 103 aa9.03□□□□□ -0.96
HMGXB3-203ENST00000510472 RHOGP84095 191 aa9.03□□□□□ -0.96
HMGXB3-203ENST00000510472 DEFA5Q01523 94 aa9.03□□□□□ -0.96
HMGXB3-203ENST00000510472 SURF2Q15527 256 aaPredicted RBP9.03□□□□□ -0.96
HMGXB3-203ENST00000510472 C19orf35Q6ZS72 473 aa9.03□□□□□ -0.96
HMGXB3-203ENST00000510472 REC114Q7Z4M0 266 aa9.03□□□□□ -0.96
HMGXB3-203ENST00000510472 FAM223AQ8IWN6 122 aa9.03□□□□□ -0.96
HMGXB3-203ENST00000510472 NECAP1Q8NC96 275 aa9.03□□□□□ -0.96
HMGXB3-203ENST00000510472 ZFAND1Q8TCF1 268 aa9.03□□□□□ -0.96
HMGXB3-203ENST00000510472 MARCH1Q8TCQ1 289 aa9.03□□□□□ -0.96
HMGXB3-203ENST00000510472 DPF1Q92782 380 aa9.03□□□□□ -0.96
HMGXB3-203ENST00000510472 TRIM63Q969Q1 353 aa9.03□□□□□ -0.96
HMGXB3-203ENST00000510472 FYTTD1Q96QD9 318 aaKnown RBP9.03□□□□□ -0.96
HMGXB3-203ENST00000510472 TP53RKQ96S44 253 aa9.03□□□□□ -0.96
HMGXB3-203ENST00000510472 C5orf66Q9H5L9 145 aa9.03□□□□□ -0.96
HMGXB3-203ENST00000510472 RANGRFQ9HD47 186 aaPredicted RBP9.03□□□□□ -0.96
HMGXB3-203ENST00000510472 NDUFA4L2Q9NRX3 87 aa9.03□□□□□ -0.96
HMGXB3-203ENST00000510472 TMEM14BQ9NUH8 114 aa9.03□□□□□ -0.96
HMGXB3-203ENST00000510472 NDUFA13Q9P0J0 144 aa9.03□□□□□ -0.96
HMGXB3-203ENST00000510472 GPR132Q9UNW8 380 aa9.03□□□□□ -0.96
HMGXB3-203ENST00000510472 DMRT1Q9Y5R6 373 aa9.03□□□□□ -0.96
HMGXB3-203ENST00000510472 DBX1A6NMT0 343 aa9.02□□□□□ -0.97
HMGXB3-203ENST00000510472 DISC1C4P0D8 188 aa9.02□□□□□ -0.97
HMGXB3-203ENST00000510472 OVOL1O14753 267 aa9.02□□□□□ -0.97
HMGXB3-203ENST00000510472 TRBV12-3P01733 135 aa9.02□□□□□ -0.97
HMGXB3-203ENST00000510472 HOXD3P31249 432 aaPredicted RBP9.02□□□□□ -0.97
HMGXB3-203ENST00000510472 ECI1P42126 302 aa9.02□□□□□ -0.97
HMGXB3-203ENST00000510472 PPP5CP53041 499 aa9.02□□□□□ -0.97
HMGXB3-203ENST00000510472 RAB25P57735 213 aa9.02□□□□□ -0.97
HMGXB3-203ENST00000510472 ERVK-16P61578 105 aa9.02□□□□□ -0.97
HMGXB3-203ENST00000510472 KLF9Q13886 244 aaPredicted RBP9.02□□□□□ -0.97
HMGXB3-203ENST00000510472 KLF5Q13887 457 aaPredicted RBP9.02□□□□□ -0.97
HMGXB3-203ENST00000510472 SCGB2B2Q4G0G5 96 aa9.02□□□□□ -0.97
HMGXB3-203ENST00000510472 OR51S1Q8NGJ8 323 aa9.02□□□□□ -0.97
HMGXB3-203ENST00000510472 OR6Q1Q8NGQ2 317 aa9.02□□□□□ -0.97
HMGXB3-203ENST00000510472 QTRT1Q9BXR0 403 aaKnown RBP9.02□□□□□ -0.97
HMGXB3-203ENST00000510472 COMMD5Q9GZQ3 224 aa9.02□□□□□ -0.97
HMGXB3-203ENST00000510472 NSG2Q9Y328 171 aa9.02□□□□□ -0.97
HMGXB3-203ENST00000510472 IGLV11-55A0A075B6I3 123 aa9.01□□□□□ -0.97
HMGXB3-203ENST00000510472 C3orf85A0A1B0GTC6 90 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms