RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 PRNDQ9UKY0 176 aa4.12□□□□□ -1.75
HMGB3P16-201ENST00000508037 PSG11Q9UQ72 335 aa4.12□□□□□ -1.75
HMGB3P16-201ENST00000508037 MRPS16Q9Y3D3 137 aaKnown RBP4.12□□□□□ -1.75
HMGB3P16-201ENST00000508037 PAM16Q9Y3D7 125 aa4.12□□□□□ -1.75
HMGB3P16-201ENST00000508037 LSM4Q9Y4Z0 139 aaKnown RBP4.12□□□□□ -1.75
HMGB3P16-201ENST00000508037 U3KQE9 123 aa4.12□□□□□ -1.75
HMGB3P16-201ENST00000508037 ABCA7Q8IZY2 2146 aa4.12□□□□□ -1.75
HMGB3P16-201ENST00000508037 ASXL3Q9C0F0 2248 aa4.11□□□□□ -1.75
HMGB3P16-201ENST00000508037 CEP192Q8TEP8 1941 aa4.11□□□□□ -1.75
HMGB3P16-201ENST00000508037 A0A1W2PRE2 83 aa4.11□□□□□ -1.75
HMGB3P16-201ENST00000508037 GRIFINA4D1Z8 144 aa4.11□□□□□ -1.75
HMGB3P16-201ENST00000508037 PINLYPA6NC86 204 aa4.11□□□□□ -1.75
HMGB3P16-201ENST00000508037 IZUMO1RA6ND01 250 aa4.11□□□□□ -1.75
HMGB3P16-201ENST00000508037 ZNF503-AS2A6NEH8 195 aa4.11□□□□□ -1.75
HMGB3P16-201ENST00000508037 C15orf61A6NNL5 157 aa4.11□□□□□ -1.75
HMGB3P16-201ENST00000508037 C21orf140B9A014 251 aa4.11□□□□□ -1.75
HMGB3P16-201ENST00000508037 PRSS46E5RG02 174 aa4.11□□□□□ -1.75
HMGB3P16-201ENST00000508037 M0R1X1 148 aa4.11□□□□□ -1.75
HMGB3P16-201ENST00000508037 MGST3O14880 152 aa4.11□□□□□ -1.75
HMGB3P16-201ENST00000508037 PSPNO60542 156 aa4.11□□□□□ -1.75
HMGB3P16-201ENST00000508037 FCGR3BO75015 233 aa4.11□□□□□ -1.75
HMGB3P16-201ENST00000508037 ZNF324O75467 553 aaPredicted RBP4.11□□□□□ -1.75
HMGB3P16-201ENST00000508037 APCSP02743 223 aa4.11□□□□□ -1.75
HMGB3P16-201ENST00000508037 GRPP07492 148 aa4.11□□□□□ -1.75
HMGB3P16-201ENST00000508037 CHRNB4P30926 498 aa4.11□□□□□ -1.75
HMGB3P16-201ENST00000508037 AMTP48728 403 aa4.11□□□□□ -1.75
HMGB3P16-201ENST00000508037 PRRX1P54821 245 aa4.11□□□□□ -1.75
HMGB3P16-201ENST00000508037 HSPE1P61604 102 aaKnown RBP4.11□□□□□ -1.75
HMGB3P16-201ENST00000508037 AESQ08117 197 aa4.11□□□□□ -1.75
HMGB3P16-201ENST00000508037 BATFQ16520 125 aa4.11□□□□□ -1.75
HMGB3P16-201ENST00000508037 MIC13Q5XKP0 118 aa4.11□□□□□ -1.75
HMGB3P16-201ENST00000508037 STUMQ69YW2 141 aa4.11□□□□□ -1.75
HMGB3P16-201ENST00000508037 SPINK14Q6IE38 97 aa4.11□□□□□ -1.75
HMGB3P16-201ENST00000508037 TCF23Q7RTU1 214 aa4.11□□□□□ -1.75
HMGB3P16-201ENST00000508037 WDR86Q86TI4 376 aa4.11□□□□□ -1.75
HMGB3P16-201ENST00000508037 C11orf42Q8N5U0 333 aa4.11□□□□□ -1.75
HMGB3P16-201ENST00000508037 GCSAMQ8N6F7 178 aa4.11□□□□□ -1.75
HMGB3P16-201ENST00000508037 TMEM251Q8N6I4 163 aa4.11□□□□□ -1.75
HMGB3P16-201ENST00000508037 Q8N7P7 452 aa4.11□□□□□ -1.75
HMGB3P16-201ENST00000508037 STPG3Q8N7X2 389 aa4.11□□□□□ -1.75
HMGB3P16-201ENST00000508037 ZNF114Q8NC26 417 aa4.11□□□□□ -1.75
HMGB3P16-201ENST00000508037 C1orf162Q8NEQ5 155 aaPredicted RBP4.11□□□□□ -1.75
HMGB3P16-201ENST00000508037 SLC24A4Q8NFF2 622 aa4.11□□□□□ -1.75
HMGB3P16-201ENST00000508037 UBALD1Q8TB05 177 aa4.11□□□□□ -1.75
HMGB3P16-201ENST00000508037 SLC25A40Q8TBP6 338 aa4.11□□□□□ -1.75
HMGB3P16-201ENST00000508037 MRGPRDQ8TDS7 321 aa4.11□□□□□ -1.75
HMGB3P16-201ENST00000508037 WIPF2Q8TF74 440 aaPredicted RBP4.11□□□□□ -1.75
HMGB3P16-201ENST00000508037 TMEM190Q8WZ59 177 aa4.11□□□□□ -1.75
HMGB3P16-201ENST00000508037 STARD4Q96DR4 205 aa4.11□□□□□ -1.75
HMGB3P16-201ENST00000508037 OR2V2Q96R30 315 aa4.11□□□□□ -1.75
HMGB3P16-201ENST00000508037 GAL3ST2Q9H3Q3 398 aa4.11□□□□□ -1.75
HMGB3P16-201ENST00000508037 MS4A5Q9H3V2 200 aa4.11□□□□□ -1.75
HMGB3P16-201ENST00000508037 GNB4Q9HAV0 340 aa4.11□□□□□ -1.75
HMGB3P16-201ENST00000508037 PLEKHA3Q9HB20 300 aa4.11□□□□□ -1.75
HMGB3P16-201ENST00000508037 MSL2Q9HCI7 577 aa4.11□□□□□ -1.75
HMGB3P16-201ENST00000508037 NRN1Q9NPD7 142 aa4.11□□□□□ -1.75
HMGB3P16-201ENST00000508037 AURKAIP1Q9NWT8 199 aaPredicted RBP4.11□□□□□ -1.75
HMGB3P16-201ENST00000508037 TCF19Q9Y242 345 aa4.11□□□□□ -1.75
HMGB3P16-201ENST00000508037 FOXA2Q9Y261 457 aaPredicted RBP4.11□□□□□ -1.75
HMGB3P16-201ENST00000508037 SIT1Q9Y3P8 196 aa4.11□□□□□ -1.75
HMGB3P16-201ENST00000508037 LOXL2Q9Y4K0 774 aa4.11□□□□□ -1.75
HMGB3P16-201ENST00000508037 TBL2Q9Y4P3 447 aaKnown RBP4.11□□□□□ -1.75
HMGB3P16-201ENST00000508037 YTHDF2Q9Y5A9 579 aaKnown RBP4.11□□□□□ -1.75
HMGB3P16-201ENST00000508037 V9GYV3 84 aa4.11□□□□□ -1.75
HMGB3P16-201ENST00000508037 GON4LQ3T8J9 2241 aa4.11□□□□□ -1.75
HMGB3P16-201ENST00000508037 EML6Q6ZMW3 1958 aa4.11□□□□□ -1.75
HMGB3P16-201ENST00000508037 ASCC3Q8N3C0 2202 aaKnown RBP4.1□□□□□ -1.75
HMGB3P16-201ENST00000508037 TRBV20OR9-2A0A075B6H5 130 aa4.1□□□□□ -1.75
HMGB3P16-201ENST00000508037 SMIM27A0A1W2PRY6 76 aa4.1□□□□□ -1.75
HMGB3P16-201ENST00000508037 DPRXA6NFQ7 191 aa4.1□□□□□ -1.75
HMGB3P16-201ENST00000508037 LINC00473A8K010 186 aa4.1□□□□□ -1.75
HMGB3P16-201ENST00000508037 C15orf65H3BRN8 121 aa4.1□□□□□ -1.75
HMGB3P16-201ENST00000508037 TIMM8AO60220 97 aaPredicted RBP4.1□□□□□ -1.75
HMGB3P16-201ENST00000508037 NUPR1O60356 82 aa4.1□□□□□ -1.75
HMGB3P16-201ENST00000508037 OR9G9P0C7N8 305 aa4.1□□□□□ -1.75
HMGB3P16-201ENST00000508037 LINC00869P0C866 280 aa4.1□□□□□ -1.75
HMGB3P16-201ENST00000508037 IGLC2P0DOY2 106 aa4.1□□□□□ -1.75
HMGB3P16-201ENST00000508037 IGLC3P0DOY3 106 aa4.1□□□□□ -1.75
HMGB3P16-201ENST00000508037 TDGF1P13385 188 aa4.1□□□□□ -1.75
HMGB3P16-201ENST00000508037 EGR1P18146 543 aa4.1□□□□□ -1.75
HMGB3P16-201ENST00000508037 BMP5P22003 454 aa4.1□□□□□ -1.75
HMGB3P16-201ENST00000508037 CTRLP40313 264 aa4.1□□□□□ -1.75
HMGB3P16-201ENST00000508037 MAGEA5P43359 124 aa4.1□□□□□ -1.75
HMGB3P16-201ENST00000508037 FOXG1P55316 489 aaPredicted RBP4.1□□□□□ -1.75
HMGB3P16-201ENST00000508037 KLF3P57682 345 aaPredicted RBP4.1□□□□□ -1.75
HMGB3P16-201ENST00000508037 BRWD1-AS2P59051 145 aa4.1□□□□□ -1.75
HMGB3P16-201ENST00000508037 SELENOVP59797 346 aa4.1□□□□□ -1.75
HMGB3P16-201ENST00000508037 RPS20P60866 119 aaKnown RBP4.1□□□□□ -1.75
HMGB3P16-201ENST00000508037 FOXF2Q12947 444 aa4.1□□□□□ -1.75
HMGB3P16-201ENST00000508037 PSG5Q15238 335 aa4.1□□□□□ -1.75
HMGB3P16-201ENST00000508037 PRSS8Q16651 343 aa4.1□□□□□ -1.75
HMGB3P16-201ENST00000508037 CR1LQ2VPA4 569 aa4.1□□□□□ -1.75
HMGB3P16-201ENST00000508037 KRTCAP3Q53RY4 240 aa4.1□□□□□ -1.75
HMGB3P16-201ENST00000508037 SPINK9Q5DT21 86 aa4.1□□□□□ -1.75
HMGB3P16-201ENST00000508037 CENPWQ5EE01 88 aa4.1□□□□□ -1.75
HMGB3P16-201ENST00000508037 GCSAMLQ5JQS6 135 aa4.1□□□□□ -1.75
HMGB3P16-201ENST00000508037 LEMD1Q68G75 181 aa4.1□□□□□ -1.75
HMGB3P16-201ENST00000508037 PET117Q6UWS5 81 aa4.1□□□□□ -1.75
HMGB3P16-201ENST00000508037 Q6ZN92 141 aa4.1□□□□□ -1.75
HMGB3P16-201ENST00000508037 TMEM136Q6ZRR5 245 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms