RNA–Protein interactions for RNA: ENST00000507689.1

COL1A1-211, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-211ENST00000507689 SLC2A9Q9NRM0 540 aa12.1□□□□□ -0.47
COL1A1-211ENST00000507689 TMEM140Q9NV12 185 aa12.1□□□□□ -0.47
COL1A1-211ENST00000507689 PEF1Q9UBV8 284 aaKnown RBP12.1□□□□□ -0.47
COL1A1-211ENST00000507689 MARCH11A6NNE9 402 aa12.09□□□□□ -0.47
COL1A1-211ENST00000507689 DISC1C4P0D8 188 aa12.09□□□□□ -0.47
COL1A1-211ENST00000507689 ATG12O94817 140 aa12.09□□□□□ -0.47
COL1A1-211ENST00000507689 KRASP01116 189 aa12.09□□□□□ -0.47
COL1A1-211ENST00000507689 CD3DP04234 171 aa12.09□□□□□ -0.47
COL1A1-211ENST00000507689 HIST1H1BP16401 226 aaKnown RBP12.09□□□□□ -0.47
COL1A1-211ENST00000507689 S100A5P33763 92 aa12.09□□□□□ -0.47
COL1A1-211ENST00000507689 ECI1P42126 302 aa12.09□□□□□ -0.47
COL1A1-211ENST00000507689 SLURP1P55000 103 aa12.09□□□□□ -0.47
COL1A1-211ENST00000507689 BRWD1-AS2P59051 145 aa12.09□□□□□ -0.47
COL1A1-211ENST00000507689 POU2AF1Q16633 256 aa12.09□□□□□ -0.47
COL1A1-211ENST00000507689 C10orf55Q5SWW7 151 aa12.09□□□□□ -0.47
COL1A1-211ENST00000507689 ASPHD1Q5U4P2 390 aa12.09□□□□□ -0.47
COL1A1-211ENST00000507689 THOC7Q6I9Y2 204 aaKnown RBP12.09□□□□□ -0.47
COL1A1-211ENST00000507689 TBC1D26Q86UD7 250 aa12.09□□□□□ -0.47
COL1A1-211ENST00000507689 CCDC71LQ8N9Z2 235 aa12.09□□□□□ -0.47
COL1A1-211ENST00000507689 ZNF486Q96H40 463 aaPredicted RBP12.09□□□□□ -0.47
COL1A1-211ENST00000507689 TSC22D3Q99576 134 aa12.09□□□□□ -0.47
COL1A1-211ENST00000507689 RSRP1Q9BUV0 290 aa12.09□□□□□ -0.47
COL1A1-211ENST00000507689 FKBP11Q9NYL4 201 aa12.09□□□□□ -0.47
COL1A1-211ENST00000507689 HMX3A6NHT5 357 aa12.08□□□□□ -0.48
COL1A1-211ENST00000507689 NPIPB5A8MRT5 1133 aa12.08□□□□□ -0.48
COL1A1-211ENST00000507689 UPK2O00526 184 aa12.08□□□□□ -0.48
COL1A1-211ENST00000507689 LY86O95711 162 aa12.08□□□□□ -0.48
COL1A1-211ENST00000507689 FGF2P09038 288 aa12.08□□□□□ -0.48
COL1A1-211ENST00000507689 RPA2P15927 270 aa12.08□□□□□ -0.48
COL1A1-211ENST00000507689 MRGPRG-AS1Q2M3A8 158 aa12.08□□□□□ -0.48
COL1A1-211ENST00000507689 RPEL1Q2QD12 228 aa12.08□□□□□ -0.48
COL1A1-211ENST00000507689 STEAP1BQ6NZ63 245 aa12.08□□□□□ -0.48
COL1A1-211ENST00000507689 HSD17B13Q7Z5P4 300 aaPredicted RBP12.08□□□□□ -0.48
COL1A1-211ENST00000507689 DLX4Q92988 240 aaPredicted RBP12.08□□□□□ -0.48
COL1A1-211ENST00000507689 SRSF8Q9BRL6 282 aaKnown RBP12.08□□□□□ -0.48
COL1A1-211ENST00000507689 MIXL1Q9H2W2 232 aa12.08□□□□□ -0.48
COL1A1-211ENST00000507689 FAM212BQ9NTI7 297 aaPredicted RBP12.08□□□□□ -0.48
COL1A1-211ENST00000507689 THYN1Q9P016 225 aa12.08□□□□□ -0.48
COL1A1-211ENST00000507689 COPZ2Q9P299 210 aa12.08□□□□□ -0.48
COL1A1-211ENST00000507689 FABP12A6NFH5 140 aa12.07□□□□□ -0.48
COL1A1-211ENST00000507689 RBMXL2O75526 392 aaKnown RBP12.07□□□□□ -0.48
COL1A1-211ENST00000507689 ZNF735P0CB33 412 aa12.07□□□□□ -0.48
COL1A1-211ENST00000507689 PSMB6P28072 239 aa12.07□□□□□ -0.48
COL1A1-211ENST00000507689 KRTAP10-11P60412 298 aa12.07□□□□□ -0.48
COL1A1-211ENST00000507689 EXOSC2Q13868 293 aaKnown RBP12.07□□□□□ -0.48
COL1A1-211ENST00000507689 H2BFWTQ7Z2G1 175 aa12.07□□□□□ -0.48
COL1A1-211ENST00000507689 OR6Q1Q8NGQ2 317 aa12.07□□□□□ -0.48
COL1A1-211ENST00000507689 OR1L8Q8NGR8 309 aa12.07□□□□□ -0.48
COL1A1-211ENST00000507689 SMIM4Q8WVI0 70 aa12.07□□□□□ -0.48
COL1A1-211ENST00000507689 HINT2Q9BX68 163 aa12.07□□□□□ -0.48
COL1A1-211ENST00000507689 QTRT1Q9BXR0 403 aaKnown RBP12.07□□□□□ -0.48
COL1A1-211ENST00000507689 PRNDQ9UKY0 176 aa12.07□□□□□ -0.48
COL1A1-211ENST00000507689 NOTCH3Q9UM47 2321 aa12.07□□□□□ -0.48
COL1A1-211ENST00000507689 C14orf166Q9Y224 244 aaKnown RBP12.07□□□□□ -0.48
COL1A1-211ENST00000507689 CTDSPLO15194 276 aa12.06□□□□□ -0.48
COL1A1-211ENST00000507689 OR2J3O76001 311 aa12.06□□□□□ -0.48
COL1A1-211ENST00000507689 PRH1P02810 166 aa12.06□□□□□ -0.48
COL1A1-211ENST00000507689 IL6RP08887 468 aaPredicted RBP12.06□□□□□ -0.48
COL1A1-211ENST00000507689 AKAIN1P0CW23 69 aa12.06□□□□□ -0.48
COL1A1-211ENST00000507689 TRAPPC2P0DI81 140 aa12.06□□□□□ -0.48
COL1A1-211ENST00000507689 TRAPPC2BP0DI82 140 aa12.06□□□□□ -0.48
COL1A1-211ENST00000507689 G6PCP35575 357 aa12.06□□□□□ -0.48
COL1A1-211ENST00000507689 MECP2P51608 486 aaKnown RBP12.06□□□□□ -0.48
COL1A1-211ENST00000507689 PPP5CP53041 499 aa12.06□□□□□ -0.48
COL1A1-211ENST00000507689 C15orf32Q32M92 178 aa12.06□□□□□ -0.48
COL1A1-211ENST00000507689 ZNF343Q6P1L6 599 aa12.06□□□□□ -0.48
COL1A1-211ENST00000507689 OR4A16Q8NH70 328 aa12.06□□□□□ -0.48
COL1A1-211ENST00000507689 TERB2Q8NHR7 220 aa12.06□□□□□ -0.48
COL1A1-211ENST00000507689 TMEM56Q96MV1 263 aa12.06□□□□□ -0.48
COL1A1-211ENST00000507689 AKIP1Q9NQ31 210 aa12.06□□□□□ -0.48
COL1A1-211ENST00000507689 FBXL7Q9UJT9 491 aa12.06□□□□□ -0.48
COL1A1-211ENST00000507689 CEPT1Q9Y6K0 416 aa12.06□□□□□ -0.48
COL1A1-211ENST00000507689 TEX22C9J3V5 150 aa12.05□□□□□ -0.48
COL1A1-211ENST00000507689 CD74P04233 296 aa12.05□□□□□ -0.48
COL1A1-211ENST00000507689 PIGPP57054 158 aa12.05□□□□□ -0.48
COL1A1-211ENST00000507689 OR2B8PP59922 312 aa12.05□□□□□ -0.48
COL1A1-211ENST00000507689 DEFA5Q01523 94 aa12.05□□□□□ -0.48
COL1A1-211ENST00000507689 RNASE11Q8TAA1 199 aaKnown RBP12.05□□□□□ -0.48
COL1A1-211ENST00000507689 EEF1AKMT3Q96AZ1 226 aa12.05□□□□□ -0.48
COL1A1-211ENST00000507689 PRRT1Q99946 306 aa12.05□□□□□ -0.48
COL1A1-211ENST00000507689 SLIRPQ9GZT3 109 aaKnown RBP12.05□□□□□ -0.48
COL1A1-211ENST00000507689 PEMTQ9UBM1 199 aa12.05□□□□□ -0.48
COL1A1-211ENST00000507689 ZNF256Q9Y2P7 627 aaPredicted RBP12.05□□□□□ -0.48
COL1A1-211ENST00000507689 OR51B2Q9Y5P1 312 aa12.05□□□□□ -0.48
COL1A1-211ENST00000507689 TRBV9A0A0B4J1U6 114 aa12.04□□□□□ -0.48
COL1A1-211ENST00000507689 B3GALNT1O75752 331 aa12.04□□□□□ -0.48
COL1A1-211ENST00000507689 REG1AP05451 166 aa12.04□□□□□ -0.48
COL1A1-211ENST00000507689 CRYGCP07315 174 aa12.04□□□□□ -0.48
COL1A1-211ENST00000507689 AREGP15514 252 aa12.04□□□□□ -0.48
COL1A1-211ENST00000507689 TNFSF8P32971 234 aa12.04□□□□□ -0.48
COL1A1-211ENST00000507689 FAUP35544 74 aaKnown RBP12.04□□□□□ -0.48
COL1A1-211ENST00000507689 RND3P61587 244 aa12.04□□□□□ -0.48
COL1A1-211ENST00000507689 TRIM16LQ309B1 348 aa12.04□□□□□ -0.48
COL1A1-211ENST00000507689 ACSM6Q6P461 480 aa12.04□□□□□ -0.48
COL1A1-211ENST00000507689 CADM3Q8N126 398 aa12.04□□□□□ -0.48
COL1A1-211ENST00000507689 CXorf58Q96LI9 332 aa12.04□□□□□ -0.48
COL1A1-211ENST00000507689 SCGB3A2Q96PL1 93 aa12.04□□□□□ -0.48
COL1A1-211ENST00000507689 SCP2D1Q9UJQ7 156 aa12.04□□□□□ -0.48
COL1A1-211ENST00000507689 CMYA5Q8N3K9 4069 aa12.03□□□□□ -0.48
COL1A1-211ENST00000507689 TEX13DA0A0J9YY54 714 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms