RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 LRRK2Q5S007 2527 aa4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 MED13Q9UHV7 2174 aa4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 ITPR1Q14643 2758 aa4.86□□□□□ -1.63
SOX2-OT-218ENST00000498731 A0A0U1RRA0 63 aa4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 ZNF816-ZNF321PA0A0X1KG74 233 aa4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 A0A1W2PPV4 95 aa4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 DPRXA6NFQ7 191 aa4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 TMEM14DPA8MWL7 114 aa4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 M0QXV9 152 aa4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 ZNF737O75373 536 aa4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 SRSF10O75494 262 aaKnown RBP4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 CRISP2P16562 243 aa4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 SSTR5P35346 364 aa4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 PAX9P55771 341 aa4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 CKS1BP61024 79 aa4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 RANP62826 216 aaKnown RBP4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 PSG7Q13046 419 aa4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 PMCHL1Q16048 86 aa4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 Q56UQ5 140 aa4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 LRRC10Q5BKY1 277 aa4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 DNM1P34Q6PK57 102 aa4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 LINC00173Q6ZV60 143 aa4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 C18orf12Q96KH6 178 aa4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 GPER1Q99527 375 aa4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 HES7Q9BYE0 225 aa4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 TXNIPQ9H3M7 391 aa4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 A0A0G2JRQ6 117 aa4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 TEX48A0A1B0GUV7 120 aa4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 MEGF11A6BM72 1044 aa4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 KIAA1324LA8MWY0 1029 aaPredicted RBP4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 CXCL13O43927 109 aa4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 NPIPB7O75200 414 aa4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 KBTBD11O94819 623 aa4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 NAPSAO96009 420 aa4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 CA2P00918 260 aa4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 AMY1AP04745 511 aa4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 ESDP10768 282 aa4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 NTF3P20783 257 aa4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 MALP21145 153 aa4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 UQCRFS1P47985 274 aa4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 AMTP48728 403 aa4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 TGFBR3Q03167 851 aa4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 TMEM211Q6ICI0 200 aa4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 ABHD12BQ7Z5M8 362 aaPredicted RBP4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 ZDHHC23Q8IYP9 409 aa4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 OR2M7Q8NG81 312 aa4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 C18orf15Q96N68 181 aa4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 CHRDL1Q9BU40 450 aa4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 MRPL18Q9H0U6 180 aaKnown RBP4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 ANAPC10Q9UM13 185 aa4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 TMEM14AQ9Y6G1 99 aa4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 SETXQ7Z333 2677 aaKnown RBP4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 ICE1Q9Y2F5 2266 aa4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 BAHCC1Q9P281 2608 aa4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 IGHV1-45A0A0A0MS14 117 aa4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 A0A0G2JMM0 328 aa4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 A0A1W2PPB8 328 aa4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 KIR3DP1A8MWS1 328 aa4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 ZNF732B4DXR9 585 aa4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 KLF7O75840 302 aaPredicted RBP4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 FTH1P19P0C7X4 201 aa4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 PATE4P0C8F1 98 aa4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 COX6A1P12074 109 aa4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 CYB561P49447 251 aa4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 DAP3P51398 398 aaKnown RBP4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 CCL11P51671 97 aa4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 ATP5G2Q06055 141 aa4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 C3AR1Q16581 482 aa4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 UFSP1Q6NVU6 142 aa4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 FAM71F2Q6NXP2 309 aa4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 RPP25LQ8N5L8 163 aaKnown RBP4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 OR1K1Q8NGR3 316 aa4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 OR4F5Q8NH21 305 aa4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 MRPL30Q8TCC3 161 aaKnown RBP4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 ST8SIA1Q92185 356 aa4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 HOXB13Q92826 284 aaPredicted RBP4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 MRPL13Q9BYD1 178 aaKnown RBP4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 PRDM14Q9GZV8 571 aa4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 SLC25A22Q9H936 323 aa4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 MRPS16Q9Y3D3 137 aaKnown RBP4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 EML6Q6ZMW3 1958 aa4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 COL4A2P08572 1712 aa4.85□□□□□ -1.63
SOX2-OT-218ENST00000498731 A0A1W2PQD3 144 aa4.84□□□□□ -1.63
SOX2-OT-218ENST00000498731 ZNF878C9JN71 531 aa4.84□□□□□ -1.63
SOX2-OT-218ENST00000498731 EFNA2O43921 213 aa4.84□□□□□ -1.63
SOX2-OT-218ENST00000498731 HAND1O96004 215 aa4.84□□□□□ -1.63
SOX2-OT-218ENST00000498731 IER3P46695 156 aa4.84□□□□□ -1.63
SOX2-OT-218ENST00000498731 PRDX4Q13162 271 aa4.84□□□□□ -1.63
SOX2-OT-218ENST00000498731 MFAP5Q13361 173 aa4.84□□□□□ -1.63
SOX2-OT-218ENST00000498731 OR5D13Q8NGL4 314 aa4.84□□□□□ -1.63
SOX2-OT-218ENST00000498731 DLL3Q9NYJ7 618 aa4.84□□□□□ -1.63
SOX2-OT-218ENST00000498731 IGLV3-12A0A075B6K2 115 aa4.84□□□□□ -1.63
SOX2-OT-218ENST00000498731 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.84□□□□□ -1.63
SOX2-OT-218ENST00000498731 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.84□□□□□ -1.63
SOX2-OT-218ENST00000498731 MS4A18H0YCH9 400 aa4.84□□□□□ -1.63
SOX2-OT-218ENST00000498731 K7EMI3 77 aa4.84□□□□□ -1.63
SOX2-OT-218ENST00000498731 SIRPB1O00241 398 aa4.84□□□□□ -1.63
SOX2-OT-218ENST00000498731 NTN3O00634 580 aaPredicted RBP4.84□□□□□ -1.63
SOX2-OT-218ENST00000498731 PHF1O43189 567 aaPredicted RBP4.84□□□□□ -1.63
SOX2-OT-218ENST00000498731 CHST1O43916 411 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms