RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 ZNF735P0CB33 412 aa9.89□□□□□ -0.83
HSPG2-213ENST00000498495 S100A5P33763 92 aa9.89□□□□□ -0.83
HSPG2-213ENST00000498495 MEF2DQ14814 521 aa9.89□□□□□ -0.83
HSPG2-213ENST00000498495 ZNF585BQ52M93 769 aa9.89□□□□□ -0.83
HSPG2-213ENST00000498495 OR4D10Q8NGI6 311 aa9.89□□□□□ -0.83
HSPG2-213ENST00000498495 ZFAND1Q8TCF1 268 aa9.89□□□□□ -0.83
HSPG2-213ENST00000498495 DCUN1D4Q92564 292 aa9.89□□□□□ -0.83
HSPG2-213ENST00000498495 DLX4Q92988 240 aaPredicted RBP9.89□□□□□ -0.83
HSPG2-213ENST00000498495 ZNF486Q96H40 463 aaPredicted RBP9.89□□□□□ -0.83
HSPG2-213ENST00000498495 FAM212BQ9NTI7 297 aaPredicted RBP9.89□□□□□ -0.83
HSPG2-213ENST00000498495 AURKAIP1Q9NWT8 199 aaPredicted RBP9.89□□□□□ -0.83
HSPG2-213ENST00000498495 ZMAT5Q9UDW3 170 aaKnown RBP9.89□□□□□ -0.83
HSPG2-213ENST00000498495 ZNF257Q9Y2Q1 563 aa9.89□□□□□ -0.83
HSPG2-213ENST00000498495 ANKRD34BA5PLL1 514 aa9.88□□□□□ -0.83
HSPG2-213ENST00000498495 MARCH11A6NNE9 402 aa9.88□□□□□ -0.83
HSPG2-213ENST00000498495 TEX22C9J3V5 150 aa9.88□□□□□ -0.83
HSPG2-213ENST00000498495 OVOL1O14753 267 aa9.88□□□□□ -0.83
HSPG2-213ENST00000498495 SNAPC5O75971 98 aa9.88□□□□□ -0.83
HSPG2-213ENST00000498495 PRH1P02810 166 aa9.88□□□□□ -0.83
HSPG2-213ENST00000498495 AKAIN1P0CW23 69 aa9.88□□□□□ -0.83
HSPG2-213ENST00000498495 MYOD1P15172 320 aa9.88□□□□□ -0.83
HSPG2-213ENST00000498495 PI3P19957 117 aa9.88□□□□□ -0.83
HSPG2-213ENST00000498495 G6PCP35575 357 aa9.88□□□□□ -0.83
HSPG2-213ENST00000498495 PPP5CP53041 499 aa9.88□□□□□ -0.83
HSPG2-213ENST00000498495 SLURP1P55000 103 aa9.88□□□□□ -0.83
HSPG2-213ENST00000498495 PIGPP57054 158 aa9.88□□□□□ -0.83
HSPG2-213ENST00000498495 ATP5G2Q06055 141 aa9.88□□□□□ -0.83
HSPG2-213ENST00000498495 EGFEM1PQ0D2K5 195 aa9.88□□□□□ -0.83
HSPG2-213ENST00000498495 SOSTQ9BQB4 213 aa9.88□□□□□ -0.83
HSPG2-213ENST00000498495 RBM38Q9H0Z9 239 aaKnown RBP9.88□□□□□ -0.83
HSPG2-213ENST00000498495 PEF1Q9UBV8 284 aaKnown RBP9.88□□□□□ -0.83
HSPG2-213ENST00000498495 FAM223BA6NKX1 122 aa9.87□□□□□ -0.83
HSPG2-213ENST00000498495 NPIPB5A8MRT5 1133 aa9.87□□□□□ -0.83
HSPG2-213ENST00000498495 GSTZ1O43708 216 aaPredicted RBP9.87□□□□□ -0.83
HSPG2-213ENST00000498495 OR2J3O76001 311 aa9.87□□□□□ -0.83
HSPG2-213ENST00000498495 DHFRP00374 187 aa9.87□□□□□ -0.83
HSPG2-213ENST00000498495 SERPINE2P07093 398 aa9.87□□□□□ -0.83
HSPG2-213ENST00000498495 DEFA4P12838 97 aa9.87□□□□□ -0.83
HSPG2-213ENST00000498495 ZP3P21754 424 aa9.87□□□□□ -0.83
HSPG2-213ENST00000498495 PSMB6P28072 239 aa9.87□□□□□ -0.83
HSPG2-213ENST00000498495 OR2B8PP59922 312 aa9.87□□□□□ -0.83
HSPG2-213ENST00000498495 KRTAP10-11P60412 298 aa9.87□□□□□ -0.83
HSPG2-213ENST00000498495 RND3P61587 244 aa9.87□□□□□ -0.83
HSPG2-213ENST00000498495 RHOGP84095 191 aa9.87□□□□□ -0.83
HSPG2-213ENST00000498495 DEFA5Q01523 94 aa9.87□□□□□ -0.83
HSPG2-213ENST00000498495 FAAP20Q6NZ36 180 aa9.87□□□□□ -0.83
HSPG2-213ENST00000498495 ZNF343Q6P1L6 599 aa9.87□□□□□ -0.83
HSPG2-213ENST00000498495 FAM223AQ8IWN6 122 aa9.87□□□□□ -0.83
HSPG2-213ENST00000498495 CADM3Q8N126 398 aa9.87□□□□□ -0.83
HSPG2-213ENST00000498495 CCDC71LQ8N9Z2 235 aa9.87□□□□□ -0.83
HSPG2-213ENST00000498495 MRAPQ8TCY5 172 aa9.87□□□□□ -0.83
HSPG2-213ENST00000498495 THAP7Q9BT49 309 aaPredicted RBP9.87□□□□□ -0.83
HSPG2-213ENST00000498495 AKIP1Q9NQ31 210 aa9.87□□□□□ -0.83
HSPG2-213ENST00000498495 COPZ2Q9P299 210 aa9.87□□□□□ -0.83
HSPG2-213ENST00000498495 TNCP24821 2201 aa9.86□□□□□ -0.83
HSPG2-213ENST00000498495 TRBV9A0A0B4J1U6 114 aa9.86□□□□□ -0.83
HSPG2-213ENST00000498495 TEX50A0A1B0GTY4 177 aa9.86□□□□□ -0.83
HSPG2-213ENST00000498495 A0A1B0GW64 132 aa9.86□□□□□ -0.83
HSPG2-213ENST00000498495 CRYGCP07315 174 aa9.86□□□□□ -0.83
HSPG2-213ENST00000498495 FGF2P09038 288 aa9.86□□□□□ -0.83
HSPG2-213ENST00000498495 TRAPPC2P0DI81 140 aa9.86□□□□□ -0.83
HSPG2-213ENST00000498495 TRAPPC2BP0DI82 140 aa9.86□□□□□ -0.83
HSPG2-213ENST00000498495 AREGP15514 252 aa9.86□□□□□ -0.83
HSPG2-213ENST00000498495 PTBP1P26599 531 aaKnown RBP eCLIP9.86□□□□□ -0.83
HSPG2-213ENST00000498495 ECI1P42126 302 aa9.86□□□□□ -0.83
HSPG2-213ENST00000498495 INSL3P51460 131 aa9.86□□□□□ -0.83
HSPG2-213ENST00000498495 ZNF45Q02386 682 aa9.86□□□□□ -0.83
HSPG2-213ENST00000498495 PYDC2Q56P42 97 aa9.86□□□□□ -0.83
HSPG2-213ENST00000498495 H2BFWTQ7Z2G1 175 aa9.86□□□□□ -0.83
HSPG2-213ENST00000498495 NECAP1Q8NC96 275 aa9.86□□□□□ -0.83
HSPG2-213ENST00000498495 OR4C16Q8NGL9 310 aa9.86□□□□□ -0.83
HSPG2-213ENST00000498495 OR1L8Q8NGR8 309 aa9.86□□□□□ -0.83
HSPG2-213ENST00000498495 MARCH1Q8TCQ1 289 aa9.86□□□□□ -0.83
HSPG2-213ENST00000498495 TSC22D3Q99576 134 aa9.86□□□□□ -0.83
HSPG2-213ENST00000498495 FKBP11Q9NYL4 201 aa9.86□□□□□ -0.83
HSPG2-213ENST00000498495 NSG2Q9Y328 171 aa9.86□□□□□ -0.83
HSPG2-213ENST00000498495 NOTCH3Q9UM47 2321 aa9.85□□□□□ -0.83
HSPG2-213ENST00000498495 C3orf85A0A1B0GTC6 90 aa9.85□□□□□ -0.83
HSPG2-213ENST00000498495 ANKRD20A5PA0PJZ0 165 aa9.85□□□□□ -0.83
HSPG2-213ENST00000498495 CGB1A6NKQ9 187 aa9.85□□□□□ -0.83
HSPG2-213ENST00000498495 RBMXL2O75526 392 aaKnown RBP9.85□□□□□ -0.83
HSPG2-213ENST00000498495 REG1AP05451 166 aa9.85□□□□□ -0.83
HSPG2-213ENST00000498495 CTSDP07339 412 aaPredicted RBP9.85□□□□□ -0.83
HSPG2-213ENST00000498495 HIST1H1BP16401 226 aaKnown RBP9.85□□□□□ -0.83
HSPG2-213ENST00000498495 CTRB1P17538 263 aa9.85□□□□□ -0.83
HSPG2-213ENST00000498495 TATDN3Q17R31 274 aa9.85□□□□□ -0.83
HSPG2-213ENST00000498495 DEFB121Q5J5C9 76 aa9.85□□□□□ -0.83
HSPG2-213ENST00000498495 CTRB2Q6GPI1 263 aa9.85□□□□□ -0.83
HSPG2-213ENST00000498495 THOC7Q6I9Y2 204 aaKnown RBP9.85□□□□□ -0.83
HSPG2-213ENST00000498495 ZNF429Q86V71 674 aa9.85□□□□□ -0.83
HSPG2-213ENST00000498495 OR13C8Q8NGS7 320 aa9.85□□□□□ -0.83
HSPG2-213ENST00000498495 OR4A16Q8NH70 328 aa9.85□□□□□ -0.83
HSPG2-213ENST00000498495 OR4C12Q96R67 309 aa9.85□□□□□ -0.83
HSPG2-213ENST00000498495 PRRT1Q99946 306 aa9.85□□□□□ -0.83
HSPG2-213ENST00000498495 SRSF8Q9BRL6 282 aaKnown RBP9.85□□□□□ -0.83
HSPG2-213ENST00000498495 HINT2Q9BX68 163 aa9.85□□□□□ -0.83
HSPG2-213ENST00000498495 QTRT1Q9BXR0 403 aaKnown RBP9.85□□□□□ -0.83
HSPG2-213ENST00000498495 NDUFA13Q9P0J0 144 aa9.85□□□□□ -0.83
HSPG2-213ENST00000498495 SCP2D1Q9UJQ7 156 aa9.85□□□□□ -0.83
HSPG2-213ENST00000498495 FBXL7Q9UJT9 491 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms