RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 AGMATQ9BSE5 352 aa10.38□□□□□ -0.75
ERCC3-209ENST00000494464 PRR13Q9NZ81 148 aa10.38□□□□□ -0.75
ERCC3-209ENST00000494464 OR1A1Q9P1Q5 309 aa10.38□□□□□ -0.75
ERCC3-209ENST00000494464 LINC00527Q9UJ94 153 aa10.38□□□□□ -0.75
ERCC3-209ENST00000494464 DNAH3Q8TD57 4116 aa10.37□□□□□ -0.75
ERCC3-209ENST00000494464 A0A0D9SG52 128 aa10.37□□□□□ -0.75
ERCC3-209ENST00000494464 LINC01548A6NM66 108 aa10.37□□□□□ -0.75
ERCC3-209ENST00000494464 H0Y980 276 aa10.37□□□□□ -0.75
ERCC3-209ENST00000494464 HLA-DRB1P01911 266 aa10.37□□□□□ -0.75
ERCC3-209ENST00000494464 LUMP51884 338 aaPredicted RBP10.37□□□□□ -0.75
ERCC3-209ENST00000494464 CFHR3Q02985 330 aa10.37□□□□□ -0.75
ERCC3-209ENST00000494464 OXLD1Q5BKU9 147 aa10.37□□□□□ -0.75
ERCC3-209ENST00000494464 TEX261Q6UWH6 196 aa10.37□□□□□ -0.75
ERCC3-209ENST00000494464 TMUB2Q71RG4 321 aa10.37□□□□□ -0.75
ERCC3-209ENST00000494464 REC114Q7Z4M0 266 aa10.37□□□□□ -0.75
ERCC3-209ENST00000494464 TBC1D26Q86UD7 250 aa10.37□□□□□ -0.75
ERCC3-209ENST00000494464 ZNF546Q86UE3 836 aa10.37□□□□□ -0.75
ERCC3-209ENST00000494464 RNF152Q8N8N0 203 aa10.37□□□□□ -0.75
ERCC3-209ENST00000494464 THAP6Q8TBB0 222 aa10.37□□□□□ -0.75
ERCC3-209ENST00000494464 GLYATL2Q8WU03 294 aa10.37□□□□□ -0.75
ERCC3-209ENST00000494464 IL22RA2Q969J5 263 aa10.37□□□□□ -0.75
ERCC3-209ENST00000494464 TMEM56Q96MV1 263 aa10.37□□□□□ -0.75
ERCC3-209ENST00000494464 HSPB9Q9BQS6 159 aa10.37□□□□□ -0.75
ERCC3-209ENST00000494464 MFFQ9GZY8 342 aa10.37□□□□□ -0.75
ERCC3-209ENST00000494464 PARP12Q9H0J9 701 aaKnown RBP10.37□□□□□ -0.75
ERCC3-209ENST00000494464 TMEM222Q9H0R3 208 aa10.37□□□□□ -0.75
ERCC3-209ENST00000494464 RDH8Q9NYR8 311 aa10.37□□□□□ -0.75
ERCC3-209ENST00000494464 TMEM56-RWDD3S4R434 201 aa10.37□□□□□ -0.75
ERCC3-209ENST00000494464 U3KQ87 197 aa10.37□□□□□ -0.75
ERCC3-209ENST00000494464 NBR2O15453 112 aa10.36□□□□□ -0.75
ERCC3-209ENST00000494464 HSPA12AO43301 675 aa10.36□□□□□ -0.75
ERCC3-209ENST00000494464 TSC22D2O75157 780 aa10.36□□□□□ -0.75
ERCC3-209ENST00000494464 ATP6V1G1O75348 118 aa10.36□□□□□ -0.75
ERCC3-209ENST00000494464 NDUFA3O95167 84 aa10.36□□□□□ -0.75
ERCC3-209ENST00000494464 IGF1P05019 195 aa10.36□□□□□ -0.75
ERCC3-209ENST00000494464 HOXB5P09067 269 aa10.36□□□□□ -0.75
ERCC3-209ENST00000494464 UCP1P25874 307 aa10.36□□□□□ -0.75
ERCC3-209ENST00000494464 GGNBP1Q5YKI7 109 aa10.36□□□□□ -0.75
ERCC3-209ENST00000494464 PRSS54Q6PEW0 395 aa10.36□□□□□ -0.75
ERCC3-209ENST00000494464 TEX38Q6PEX7 206 aa10.36□□□□□ -0.75
ERCC3-209ENST00000494464 ETV3LQ6ZN32 361 aa10.36□□□□□ -0.75
ERCC3-209ENST00000494464 KCNRGQ8N5I3 272 aa10.36□□□□□ -0.75
ERCC3-209ENST00000494464 RBMXL1Q96E39 390 aaKnown RBP10.36□□□□□ -0.75
ERCC3-209ENST00000494464 OR10C1Q96KK4 312 aa10.36□□□□□ -0.75
ERCC3-209ENST00000494464 TP53RKQ96S44 253 aa10.36□□□□□ -0.75
ERCC3-209ENST00000494464 CCL28Q9NRJ3 127 aa10.36□□□□□ -0.75
ERCC3-209ENST00000494464 MBD2Q9UBB5 411 aa10.36□□□□□ -0.75
ERCC3-209ENST00000494464 TMED3Q9Y3Q3 217 aa10.36□□□□□ -0.75
ERCC3-209ENST00000494464 RNF222A6NCQ9 220 aa10.35□□□□□ -0.75
ERCC3-209ENST00000494464 MPTX1A8MV57 137 aa10.35□□□□□ -0.75
ERCC3-209ENST00000494464 PGLYRP1O75594 196 aaPredicted RBP10.35□□□□□ -0.75
ERCC3-209ENST00000494464 VDAC1P21796 283 aa10.35□□□□□ -0.75
ERCC3-209ENST00000494464 CEACAM6P40199 344 aa10.35□□□□□ -0.75
ERCC3-209ENST00000494464 FOXE3Q13461 319 aa10.35□□□□□ -0.75
ERCC3-209ENST00000494464 IAH1Q2TAA2 248 aaPredicted RBP10.35□□□□□ -0.75
ERCC3-209ENST00000494464 SP6Q3SY56 376 aa10.35□□□□□ -0.75
ERCC3-209ENST00000494464 LRRC37A5PQ49AS3 106 aa10.35□□□□□ -0.75
ERCC3-209ENST00000494464 RPL39P5Q59GN2 51 aa10.35□□□□□ -0.75
ERCC3-209ENST00000494464 ACOT7LQ6ZUV0 252 aa10.35□□□□□ -0.75
ERCC3-209ENST00000494464 LINC00482Q8N8I6 264 aa10.35□□□□□ -0.75
ERCC3-209ENST00000494464 ZBTB34Q8NCN2 500 aa10.35□□□□□ -0.75
ERCC3-209ENST00000494464 NPBQ8NG41 125 aa10.35□□□□□ -0.75
ERCC3-209ENST00000494464 RCC1LQ96I51 464 aaKnown RBP10.35□□□□□ -0.75
ERCC3-209ENST00000494464 ABHD14BQ96IU4 210 aa10.35□□□□□ -0.75
ERCC3-209ENST00000494464 ARL6Q9H0F7 186 aa10.35□□□□□ -0.75
ERCC3-209ENST00000494464 H0YJW9 148 aa10.34□□□□□ -0.75
ERCC3-209ENST00000494464 CDS2O95674 445 aa10.34□□□□□ -0.75
ERCC3-209ENST00000494464 IFNA7P01567 189 aa10.34□□□□□ -0.75
ERCC3-209ENST00000494464 IGHG4P01861 327 aa10.34□□□□□ -0.75
ERCC3-209ENST00000494464 ELANEP08246 267 aa10.34□□□□□ -0.75
ERCC3-209ENST00000494464 CT45A6P0DMU7 189 aa10.34□□□□□ -0.75
ERCC3-209ENST00000494464 CT45A5P0DMU8 189 aa10.34□□□□□ -0.75
ERCC3-209ENST00000494464 CT45A7P0DMV0 189 aa10.34□□□□□ -0.75
ERCC3-209ENST00000494464 F2RP25116 425 aa10.34□□□□□ -0.75
ERCC3-209ENST00000494464 CNTFRP26992 372 aa10.34□□□□□ -0.75
ERCC3-209ENST00000494464 MC5RP33032 325 aa10.34□□□□□ -0.75
ERCC3-209ENST00000494464 THBS3P49746 956 aa10.34□□□□□ -0.75
ERCC3-209ENST00000494464 C5orf64Q2M2E5 130 aa10.34□□□□□ -0.75
ERCC3-209ENST00000494464 CXorf66Q5JRM2 361 aaPredicted RBP10.34□□□□□ -0.75
ERCC3-209ENST00000494464 KLHL30-AS1Q8NEE0 82 aa10.34□□□□□ -0.75
ERCC3-209ENST00000494464 ZNF680Q8NEM1 530 aa10.34□□□□□ -0.75
ERCC3-209ENST00000494464 OR5AN1Q8NGI8 311 aa10.34□□□□□ -0.75
ERCC3-209ENST00000494464 LHFPL5Q8TAF8 219 aa10.34□□□□□ -0.75
ERCC3-209ENST00000494464 RITA1Q96K30 269 aa10.34□□□□□ -0.75
ERCC3-209ENST00000494464 KIAA1456Q9P272 454 aa10.34□□□□□ -0.75
ERCC3-209ENST00000494464 WASHC3Q9Y3C0 194 aa10.34□□□□□ -0.75
ERCC3-209ENST00000494464 NUDT19A8MXV4 375 aa10.33□□□□□ -0.76
ERCC3-209ENST00000494464 BCL2L11O43521 198 aa10.33□□□□□ -0.76
ERCC3-209ENST00000494464 IGLV2-14P01704 120 aa10.33□□□□□ -0.76
ERCC3-209ENST00000494464 IGLL1P15814 213 aa10.33□□□□□ -0.76
ERCC3-209ENST00000494464 C18orf65Q6ZTR6 163 aa10.33□□□□□ -0.76
ERCC3-209ENST00000494464 C8orf86Q6ZUL3 223 aa10.33□□□□□ -0.76
ERCC3-209ENST00000494464 LYZL2Q7Z4W2 148 aa10.33□□□□□ -0.76
ERCC3-209ENST00000494464 SLC51BQ86UW2 128 aa10.33□□□□□ -0.76
ERCC3-209ENST00000494464 ZNF695Q8IW36 515 aa10.33□□□□□ -0.76
ERCC3-209ENST00000494464 MRPL41Q8IXM3 137 aaKnown RBP10.33□□□□□ -0.76
ERCC3-209ENST00000494464 ZNF645Q8N7E2 425 aa10.33□□□□□ -0.76
ERCC3-209ENST00000494464 SLC35G3Q8N808 338 aa10.33□□□□□ -0.76
ERCC3-209ENST00000494464 INO80EQ8NBZ0 244 aaPredicted RBP10.33□□□□□ -0.76
ERCC3-209ENST00000494464 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms