RNA–Protein interactions for RNA: ENST00000493952.2

SATB1-217, Transcript of SATB homeobox 1, humanhuman

TSL 3 BASIC

Gene SATB1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-217ENST00000493952 C13orf42A0A1B0GVH6 325 aa12.46□□□□□ -0.41
SATB1-217ENST00000493952 CGB1A6NKQ9 187 aa12.46□□□□□ -0.41
SATB1-217ENST00000493952 MARCH11A6NNE9 402 aa12.46□□□□□ -0.41
SATB1-217ENST00000493952 HSPB1P04792 205 aaKnown RBP12.46□□□□□ -0.41
SATB1-217ENST00000493952 S100GP29377 79 aa12.46□□□□□ -0.41
SATB1-217ENST00000493952 EGFEM1PQ0D2K5 195 aa12.46□□□□□ -0.41
SATB1-217ENST00000493952 REC114Q7Z4M0 266 aa12.46□□□□□ -0.41
SATB1-217ENST00000493952 TTC9CQ8N5M4 171 aa12.46□□□□□ -0.41
SATB1-217ENST00000493952 DCUN1D4Q92564 292 aa12.46□□□□□ -0.41
SATB1-217ENST00000493952 SOSTQ9BQB4 213 aa12.46□□□□□ -0.41
SATB1-217ENST00000493952 A0A0G2JLM5 398 aa12.45□□□□□ -0.42
SATB1-217ENST00000493952 SEC14L6B5MCN3 397 aa12.45□□□□□ -0.42
SATB1-217ENST00000493952 ZNF701M0R085 212 aaPredicted RBP12.45□□□□□ -0.42
SATB1-217ENST00000493952 PGAM2P15259 253 aa12.45□□□□□ -0.42
SATB1-217ENST00000493952 PI3P19957 117 aa12.45□□□□□ -0.42
SATB1-217ENST00000493952 ERVK-16P61578 105 aa12.45□□□□□ -0.42
SATB1-217ENST00000493952 SCGB2B2Q4G0G5 96 aa12.45□□□□□ -0.42
SATB1-217ENST00000493952 C19orf35Q6ZS72 473 aa12.45□□□□□ -0.42
SATB1-217ENST00000493952 MRGPRFQ96AM1 343 aa12.45□□□□□ -0.42
SATB1-217ENST00000493952 AKIP1Q9NQ31 210 aa12.45□□□□□ -0.42
SATB1-217ENST00000493952 ZNF257Q9Y2Q1 563 aa12.45□□□□□ -0.42
SATB1-217ENST00000493952 TRBV9A0A0B4J1U6 114 aa12.44□□□□□ -0.42
SATB1-217ENST00000493952 FABP12A6NFH5 140 aa12.44□□□□□ -0.42
SATB1-217ENST00000493952 NPIPB5A8MRT5 1133 aa12.44□□□□□ -0.42
SATB1-217ENST00000493952 GSTZ1O43708 216 aaPredicted RBP12.44□□□□□ -0.42
SATB1-217ENST00000493952 KRASP01116 189 aa12.44□□□□□ -0.42
SATB1-217ENST00000493952 AREGP15514 252 aa12.44□□□□□ -0.42
SATB1-217ENST00000493952 G6PCP35575 357 aa12.44□□□□□ -0.42
SATB1-217ENST00000493952 OR2B8PP59922 312 aa12.44□□□□□ -0.42
SATB1-217ENST00000493952 RND3P61587 244 aa12.44□□□□□ -0.42
SATB1-217ENST00000493952 RHOGP84095 191 aa12.44□□□□□ -0.42
SATB1-217ENST00000493952 MEF2DQ14814 521 aa12.44□□□□□ -0.42
SATB1-217ENST00000493952 C9orf66Q5T8R8 295 aa12.44□□□□□ -0.42
SATB1-217ENST00000493952 OR4C16Q8NGL9 310 aa12.44□□□□□ -0.42
SATB1-217ENST00000493952 TERB2Q8NHR7 220 aa12.44□□□□□ -0.42
SATB1-217ENST00000493952 DLX4Q92988 240 aaPredicted RBP12.44□□□□□ -0.42
SATB1-217ENST00000493952 ZNF486Q96H40 463 aaPredicted RBP12.44□□□□□ -0.42
SATB1-217ENST00000493952 COMMD5Q9GZQ3 224 aa12.44□□□□□ -0.42
SATB1-217ENST00000493952 FAM212BQ9NTI7 297 aaPredicted RBP12.44□□□□□ -0.42
SATB1-217ENST00000493952 ANKRD20A5PA0PJZ0 165 aa12.43□□□□□ -0.42
SATB1-217ENST00000493952 ANKRD34BA5PLL1 514 aa12.43□□□□□ -0.42
SATB1-217ENST00000493952 DPPA5A6NC42 116 aa12.43□□□□□ -0.42
SATB1-217ENST00000493952 OVOL1O14753 267 aa12.43□□□□□ -0.42
SATB1-217ENST00000493952 FGF2P09038 288 aa12.43□□□□□ -0.42
SATB1-217ENST00000493952 AKAIN1P0CW23 69 aa12.43□□□□□ -0.42
SATB1-217ENST00000493952 PIGPP57054 158 aa12.43□□□□□ -0.42
SATB1-217ENST00000493952 ZNF343Q6P1L6 599 aa12.43□□□□□ -0.42
SATB1-217ENST00000493952 SLC25A42Q86VD7 318 aa12.43□□□□□ -0.42
SATB1-217ENST00000493952 OR13C8Q8NGS7 320 aa12.43□□□□□ -0.42
SATB1-217ENST00000493952 MARCH1Q8TCQ1 289 aa12.43□□□□□ -0.42
SATB1-217ENST00000493952 USMG5Q96IX5 58 aa12.43□□□□□ -0.42
SATB1-217ENST00000493952 RANGRFQ9HD47 186 aaPredicted RBP12.43□□□□□ -0.42
SATB1-217ENST00000493952 V9GYH0 126 aa12.43□□□□□ -0.42
SATB1-217ENST00000493952 IGLC7A0M8Q6 106 aa12.42□□□□□ -0.42
SATB1-217ENST00000493952 FAM223BA6NKX1 122 aa12.42□□□□□ -0.42
SATB1-217ENST00000493952 DISC1C4P0D8 188 aa12.42□□□□□ -0.42
SATB1-217ENST00000493952 OR2J3O76001 311 aa12.42□□□□□ -0.42
SATB1-217ENST00000493952 IGKV1-39P01597 117 aa12.42□□□□□ -0.42
SATB1-217ENST00000493952 TRBV12-3P01733 135 aa12.42□□□□□ -0.42
SATB1-217ENST00000493952 IGKV1D-39P04432 117 aa12.42□□□□□ -0.42
SATB1-217ENST00000493952 REG1AP05451 166 aa12.42□□□□□ -0.42
SATB1-217ENST00000493952 CRYGCP07315 174 aa12.42□□□□□ -0.42
SATB1-217ENST00000493952 PTBP1P26599 531 aaKnown RBP eCLIP12.42□□□□□ -0.42
SATB1-217ENST00000493952 PSMB6P28072 239 aa12.42□□□□□ -0.42
SATB1-217ENST00000493952 FAM223AQ8IWN6 122 aa12.42□□□□□ -0.42
SATB1-217ENST00000493952 CADM3Q8N126 398 aa12.42□□□□□ -0.42
SATB1-217ENST00000493952 MRAPQ8TCY5 172 aa12.42□□□□□ -0.42
SATB1-217ENST00000493952 NSG2Q9Y328 171 aa12.42□□□□□ -0.42
SATB1-217ENST00000493952 SORL1Q92673 2214 aa12.42□□□□□ -0.42
SATB1-217ENST00000493952 TEX50A0A1B0GTY4 177 aa12.41□□□□□ -0.42
SATB1-217ENST00000493952 WI2-2373I1.2A0A1W2PRP0 233 aa12.41□□□□□ -0.42
SATB1-217ENST00000493952 CTRB1P17538 263 aa12.41□□□□□ -0.42
SATB1-217ENST00000493952 S100A5P33763 92 aa12.41□□□□□ -0.42
SATB1-217ENST00000493952 EXOSC2Q13868 293 aaKnown RBP12.41□□□□□ -0.42
SATB1-217ENST00000493952 CTRB2Q6GPI1 263 aa12.41□□□□□ -0.42
SATB1-217ENST00000493952 NECAP1Q8NC96 275 aa12.41□□□□□ -0.42
SATB1-217ENST00000493952 OR10W1Q8NGF6 305 aa12.41□□□□□ -0.42
SATB1-217ENST00000493952 ZFAND1Q8TCF1 268 aa12.41□□□□□ -0.42
SATB1-217ENST00000493952 SEC22AQ96IW7 307 aa12.41□□□□□ -0.42
SATB1-217ENST00000493952 FANCD2OSQ96PS1 177 aa12.41□□□□□ -0.42
SATB1-217ENST00000493952 TP53RKQ96S44 253 aa12.41□□□□□ -0.42
SATB1-217ENST00000493952 PEF1Q9UBV8 284 aaKnown RBP12.41□□□□□ -0.42
SATB1-217ENST00000493952 TGP01266 2768 aa12.41□□□□□ -0.42
SATB1-217ENST00000493952 DBX1A6NMT0 343 aa12.4□□□□□ -0.42
SATB1-217ENST00000493952 H0Y980 276 aa12.4□□□□□ -0.42
SATB1-217ENST00000493952 K7EIL1 84 aa12.4□□□□□ -0.42
SATB1-217ENST00000493952 SNAPC5O75971 98 aa12.4□□□□□ -0.42
SATB1-217ENST00000493952 CTSDP07339 412 aaPredicted RBP12.4□□□□□ -0.42
SATB1-217ENST00000493952 ATP5G2Q06055 141 aa12.4□□□□□ -0.42
SATB1-217ENST00000493952 ZNF79Q15937 498 aa12.4□□□□□ -0.42
SATB1-217ENST00000493952 C15orf32Q32M92 178 aa12.4□□□□□ -0.42
SATB1-217ENST00000493952 OR51S1Q8NGJ8 323 aa12.4□□□□□ -0.42
SATB1-217ENST00000493952 THAP7Q9BT49 309 aaPredicted RBP12.4□□□□□ -0.42
SATB1-217ENST00000493952 QTRT1Q9BXR0 403 aaKnown RBP12.4□□□□□ -0.42
SATB1-217ENST00000493952 COPZ2Q9P299 210 aa12.4□□□□□ -0.42
SATB1-217ENST00000493952 FBXL7Q9UJT9 491 aa12.4□□□□□ -0.42
SATB1-217ENST00000493952 C3orf85A0A1B0GTC6 90 aa12.39□□□□□ -0.43
SATB1-217ENST00000493952 C15orf61A6NNL5 157 aa12.39□□□□□ -0.43
SATB1-217ENST00000493952 TRAPPC2P0DI81 140 aa12.39□□□□□ -0.43
SATB1-217ENST00000493952 TRAPPC2BP0DI82 140 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms