RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 AMMECR1Q9Y4X0 333 aaPredicted RBP1.03□□□□□ -2.24
HMGB1P30-201ENST00000492455 MYO3BQ8WXR4 1341 aa1.03□□□□□ -2.24
HMGB1P30-201ENST00000492455 ZNF532Q9HCE3 1301 aa1.03□□□□□ -2.24
HMGB1P30-201ENST00000492455 DCCP43146 1447 aa1.03□□□□□ -2.24
HMGB1P30-201ENST00000492455 NUP160Q12769 1436 aa1.03□□□□□ -2.24
HMGB1P30-201ENST00000492455 NYNRINQ9P2P1 1898 aaKnown RBP1.03□□□□□ -2.25
HMGB1P30-201ENST00000492455 TRAV7A0A075B6U4 112 aa1.02□□□□□ -2.25
HMGB1P30-201ENST00000492455 IGHV1-18A0A0C4DH31 117 aa1.02□□□□□ -2.25
HMGB1P30-201ENST00000492455 A0A1B0GV50 99 aa1.02□□□□□ -2.25
HMGB1P30-201ENST00000492455 A0A1B0GVG6 124 aa1.02□□□□□ -2.25
HMGB1P30-201ENST00000492455 ZNF860A6NHJ4 632 aa1.02□□□□□ -2.25
HMGB1P30-201ENST00000492455 H3BT86 120 aa1.02□□□□□ -2.25
HMGB1P30-201ENST00000492455 H7C2G1 150 aa1.02□□□□□ -2.25
HMGB1P30-201ENST00000492455 LEPROTO15243 131 aa1.02□□□□□ -2.25
HMGB1P30-201ENST00000492455 CREBL2O60519 120 aaPredicted RBP1.02□□□□□ -2.25
HMGB1P30-201ENST00000492455 IFNA16P05015 189 aa1.02□□□□□ -2.25
HMGB1P30-201ENST00000492455 SRP19P09132 144 aaKnown RBP1.02□□□□□ -2.25
HMGB1P30-201ENST00000492455 LGALS1P09382 135 aaKnown RBP1.02□□□□□ -2.25
HMGB1P30-201ENST00000492455 PSMB8P28062 276 aa1.02□□□□□ -2.25
HMGB1P30-201ENST00000492455 S100A7P31151 101 aa1.02□□□□□ -2.25
HMGB1P30-201ENST00000492455 RPL28P46779 137 aaKnown RBP1.02□□□□□ -2.25
HMGB1P30-201ENST00000492455 CSN1S1P47710 185 aa1.02□□□□□ -2.25
HMGB1P30-201ENST00000492455 TPI1P60174 286 aa1.02□□□□□ -2.25
HMGB1P30-201ENST00000492455 RAB14P61106 215 aa1.02□□□□□ -2.25
HMGB1P30-201ENST00000492455 RELAQ04206 551 aa1.02□□□□□ -2.25
HMGB1P30-201ENST00000492455 GLO1Q04760 184 aa1.02□□□□□ -2.25
HMGB1P30-201ENST00000492455 ZNF705AQ6ZN79 300 aaPredicted RBP1.02□□□□□ -2.25
HMGB1P30-201ENST00000492455 LRRC28Q86X40 367 aaPredicted RBP1.02□□□□□ -2.25
HMGB1P30-201ENST00000492455 SLC7A6Q92536 515 aa1.02□□□□□ -2.25
HMGB1P30-201ENST00000492455 FAM96AQ9H5X1 160 aa1.02□□□□□ -2.25
HMGB1P30-201ENST00000492455 PAQR5Q9NXK6 330 aaPredicted RBP1.02□□□□□ -2.25
HMGB1P30-201ENST00000492455 NAT8Q9UHE5 227 aa1.02□□□□□ -2.25
HMGB1P30-201ENST00000492455 TIMM9Q9Y5J7 89 aa1.02□□□□□ -2.25
HMGB1P30-201ENST00000492455 NCKAP5O14513 1909 aa1.01□□□□□ -2.25
HMGB1P30-201ENST00000492455 REREQ9P2R6 1566 aa1.01□□□□□ -2.25
HMGB1P30-201ENST00000492455 PLB1Q6P1J6 1458 aa1.01□□□□□ -2.25
HMGB1P30-201ENST00000492455 TRBV20OR9-2A0A075B6H5 130 aa1.01□□□□□ -2.25
HMGB1P30-201ENST00000492455 E2F6O75461 281 aa1.01□□□□□ -2.25
HMGB1P30-201ENST00000492455 TNNC2P02585 160 aa1.01□□□□□ -2.25
HMGB1P30-201ENST00000492455 ZNF705DP0CH99 300 aaPredicted RBP1.01□□□□□ -2.25
HMGB1P30-201ENST00000492455 DEFA4P12838 97 aa1.01□□□□□ -2.25
HMGB1P30-201ENST00000492455 SULT1A1P50225 295 aa1.01□□□□□ -2.25
HMGB1P30-201ENST00000492455 EMP1P54849 157 aa1.01□□□□□ -2.25
HMGB1P30-201ENST00000492455 SPCS3P61009 180 aa1.01□□□□□ -2.25
HMGB1P30-201ENST00000492455 IFITM2Q01629 132 aa1.01□□□□□ -2.25
HMGB1P30-201ENST00000492455 GLT8D1Q68CQ7 371 aa1.01□□□□□ -2.25
HMGB1P30-201ENST00000492455 Q6ZRN7 208 aaPredicted RBP1.01□□□□□ -2.25
HMGB1P30-201ENST00000492455 DYNAPQ8N1N2 210 aa1.01□□□□□ -2.25
HMGB1P30-201ENST00000492455 RPP25LQ8N5L8 163 aaKnown RBP1.01□□□□□ -2.25
HMGB1P30-201ENST00000492455 ZNF565Q8N9K5 539 aa1.01□□□□□ -2.25
HMGB1P30-201ENST00000492455 ANKRD7Q92527 254 aa1.01□□□□□ -2.25
HMGB1P30-201ENST00000492455 KLK6Q92876 244 aa1.01□□□□□ -2.25
HMGB1P30-201ENST00000492455 ERMAPQ96PL5 475 aaPredicted RBP1.01□□□□□ -2.25
HMGB1P30-201ENST00000492455 OR52E6Q96RD3 313 aa1.01□□□□□ -2.25
HMGB1P30-201ENST00000492455 OR8D2Q9GZM6 311 aa1.01□□□□□ -2.25
HMGB1P30-201ENST00000492455 CISHQ9NSE2 258 aa1.01□□□□□ -2.25
HMGB1P30-201ENST00000492455 CMTM6Q9NX76 183 aa1.01□□□□□ -2.25
HMGB1P30-201ENST00000492455 VPS29Q9UBQ0 182 aa1.01□□□□□ -2.25
HMGB1P30-201ENST00000492455 FUT9Q9Y231 359 aa1.01□□□□□ -2.25
HMGB1P30-201ENST00000492455 MALRD1Q5VYJ5 2156 aa1.01□□□□□ -2.25
HMGB1P30-201ENST00000492455 NUMA1Q14980 2115 aa1.01□□□□□ -2.25
HMGB1P30-201ENST00000492455 SLX4Q8IY92 1834 aa1.01□□□□□ -2.25
HMGB1P30-201ENST00000492455 TRAV38-1A0A0B4J264 116 aa1□□□□□ -2.25
HMGB1P30-201ENST00000492455 A0A0J9YY10 115 aa1□□□□□ -2.25
HMGB1P30-201ENST00000492455 A0A1B0GX78 115 aa1□□□□□ -2.25
HMGB1P30-201ENST00000492455 PGLYRP1O75594 196 aaPredicted RBP1□□□□□ -2.25
HMGB1P30-201ENST00000492455 LYPLA2O95372 231 aa1□□□□□ -2.25
HMGB1P30-201ENST00000492455 C1QAP02745 245 aa1□□□□□ -2.25
HMGB1P30-201ENST00000492455 C1QCP02747 245 aa1□□□□□ -2.25
HMGB1P30-201ENST00000492455 HLA-DMBP28068 263 aa1□□□□□ -2.25
HMGB1P30-201ENST00000492455 EVX1P49640 407 aa1□□□□□ -2.25
HMGB1P30-201ENST00000492455 TMEM258P61165 79 aa1□□□□□ -2.25
HMGB1P30-201ENST00000492455 SLC38A11Q08AI6 406 aa1□□□□□ -2.25
HMGB1P30-201ENST00000492455 GRK1Q15835 563 aa1□□□□□ -2.25
HMGB1P30-201ENST00000492455 ACOT6Q3I5F7 207 aaPredicted RBP1□□□□□ -2.25
HMGB1P30-201ENST00000492455 C20orf196Q8IYI0 205 aa1□□□□□ -2.25
HMGB1P30-201ENST00000492455 OR8B12Q8NGG6 310 aa1□□□□□ -2.25
HMGB1P30-201ENST00000492455 ACOT12Q8WYK0 555 aa1□□□□□ -2.25
HMGB1P30-201ENST00000492455 ZNF625Q96I27 306 aaPredicted RBP1□□□□□ -2.25
HMGB1P30-201ENST00000492455 CCDC42Q96M95 316 aa1□□□□□ -2.25
HMGB1P30-201ENST00000492455 PPP1R2P1Q96PQ5 205 aa1□□□□□ -2.25
HMGB1P30-201ENST00000492455 CHST6Q9GZX3 395 aa1□□□□□ -2.25
HMGB1P30-201ENST00000492455 UCK1Q9HA47 277 aa1□□□□□ -2.25
HMGB1P30-201ENST00000492455 EFCAB1Q9HAE3 211 aa1□□□□□ -2.25
HMGB1P30-201ENST00000492455 TIMM22Q9Y584 194 aa1□□□□□ -2.25
HMGB1P30-201ENST00000492455 ZFHX2Q9C0A1 2572 aaPredicted RBP1□□□□□ -2.25
HMGB1P30-201ENST00000492455 SNAPC4Q5SXM2 1469 aa0.99□□□□□ -2.25
HMGB1P30-201ENST00000492455 SIPA1L1O43166 1804 aa0.99□□□□□ -2.25
HMGB1P30-201ENST00000492455 A0A0D9SEW6 157 aa0.99□□□□□ -2.25
HMGB1P30-201ENST00000492455 CLDN24A6NM45 220 aa0.99□□□□□ -2.25
HMGB1P30-201ENST00000492455 KPNA3O00505 521 aaPredicted RBP0.99□□□□□ -2.25
HMGB1P30-201ENST00000492455 CHP2O43745 196 aa0.99□□□□□ -2.25
HMGB1P30-201ENST00000492455 NOS1APO75052 506 aaPredicted RBP0.99□□□□□ -2.25
HMGB1P30-201ENST00000492455 ZNF737O75373 536 aa0.99□□□□□ -2.25
HMGB1P30-201ENST00000492455 NAPSAO96009 420 aa0.99□□□□□ -2.25
HMGB1P30-201ENST00000492455 PRB1P04280 392 aa0.99□□□□□ -2.25
HMGB1P30-201ENST00000492455 SERPINA7P05543 415 aa0.99□□□□□ -2.25
HMGB1P30-201ENST00000492455 S100A6P06703 90 aa0.99□□□□□ -2.25
HMGB1P30-201ENST00000492455 RPS17P08708 135 aaKnown RBP0.99□□□□□ -2.25
HMGB1P30-201ENST00000492455 SULT1A3P0DMM9 295 aa0.99□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms