RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 FAM169BQ8N8A8 192 aa10.21□□□□□ -0.78
HMGN1-220ENST00000492280 H1FXQ92522 213 aaKnown RBP10.21□□□□□ -0.78
HMGN1-220ENST00000492280 FAM210BQ96KR6 192 aa10.21□□□□□ -0.78
HMGN1-220ENST00000492280 COL25A1Q9BXS0 654 aaPredicted RBP10.21□□□□□ -0.78
HMGN1-220ENST00000492280 GAB2Q9UQC2 676 aa10.21□□□□□ -0.78
HMGN1-220ENST00000492280 WDR83OSQ9Y284 106 aa10.21□□□□□ -0.78
HMGN1-220ENST00000492280 TIMM9Q9Y5J7 89 aa10.21□□□□□ -0.78
HMGN1-220ENST00000492280 A0A087WWC5 75 aa10.2□□□□□ -0.78
HMGN1-220ENST00000492280 C11orf94C9JXX5 98 aa10.2□□□□□ -0.78
HMGN1-220ENST00000492280 ACTL6BO94805 426 aa10.2□□□□□ -0.78
HMGN1-220ENST00000492280 IGHV3-48P01763 117 aa10.2□□□□□ -0.78
HMGN1-220ENST00000492280 FAM87AP0C7U9 286 aa10.2□□□□□ -0.78
HMGN1-220ENST00000492280 ARL14EPLP0DKL9 152 aa10.2□□□□□ -0.78
HMGN1-220ENST00000492280 CFHR2P36980 270 aa10.2□□□□□ -0.78
HMGN1-220ENST00000492280 SPCS3P61009 180 aa10.2□□□□□ -0.78
HMGN1-220ENST00000492280 PRSS8Q16651 343 aa10.2□□□□□ -0.78
HMGN1-220ENST00000492280 LYPD2Q6UXB3 125 aa10.2□□□□□ -0.78
HMGN1-220ENST00000492280 HIPK2Q9H2X6 1198 aa10.2□□□□□ -0.78
HMGN1-220ENST00000492280 IDI2-AS1Q9NZ38 188 aa10.2□□□□□ -0.78
HMGN1-220ENST00000492280 METTL1Q9UBP6 276 aaKnown RBP10.2□□□□□ -0.78
HMGN1-220ENST00000492280 IL19Q9UHD0 177 aa10.2□□□□□ -0.78
HMGN1-220ENST00000492280 PRRG2O14669 202 aa10.2□□□□□ -0.78
HMGN1-220ENST00000492280 CA2P00918 260 aa10.2□□□□□ -0.78
HMGN1-220ENST00000492280 CHRNA7P36544 502 aa10.2□□□□□ -0.78
HMGN1-220ENST00000492280 TDGF1P3P51864 188 aa10.2□□□□□ -0.78
HMGN1-220ENST00000492280 ATP6V1FQ16864 119 aa10.2□□□□□ -0.78
HMGN1-220ENST00000492280 ZNF788Q6ZQV5 615 aa10.2□□□□□ -0.78
HMGN1-220ENST00000492280 OR4S2Q8NH73 311 aa10.2□□□□□ -0.78
HMGN1-220ENST00000492280 MALSU1Q96EH3 234 aa10.2□□□□□ -0.78
HMGN1-220ENST00000492280 GGTLC1Q9BX51 225 aa10.2□□□□□ -0.78
HMGN1-220ENST00000492280 CELSR1Q9NYQ6 3014 aa10.2□□□□□ -0.78
HMGN1-220ENST00000492280 C15orf61A6NNL5 157 aa10.2□□□□□ -0.78
HMGN1-220ENST00000492280 GNB2P62879 340 aa10.2□□□□□ -0.78
HMGN1-220ENST00000492280 VWC2Q2TAL6 325 aa10.2□□□□□ -0.78
HMGN1-220ENST00000492280 ZNF114Q8NC26 417 aa10.2□□□□□ -0.78
HMGN1-220ENST00000492280 OR10W1Q8NGF6 305 aa10.2□□□□□ -0.78
HMGN1-220ENST00000492280 ABHD5Q8WTS1 349 aa10.2□□□□□ -0.78
HMGN1-220ENST00000492280 SCNM1Q9BWG6 230 aa10.2□□□□□ -0.78
HMGN1-220ENST00000492280 PARD6GQ9BYG4 376 aaPredicted RBP10.2□□□□□ -0.78
HMGN1-220ENST00000492280 PXMP4Q9Y6I8 212 aa10.2□□□□□ -0.78
HMGN1-220ENST00000492280 A0A1W2PPQ1 181 aa10.19□□□□□ -0.78
HMGN1-220ENST00000492280 PRSS46E5RG02 174 aa10.19□□□□□ -0.78
HMGN1-220ENST00000492280 C16orf97H3BN30 126 aa10.19□□□□□ -0.78
HMGN1-220ENST00000492280 CLDN34H7C241 214 aa10.19□□□□□ -0.78
HMGN1-220ENST00000492280 KBTBD11O94819 623 aa10.19□□□□□ -0.78
HMGN1-220ENST00000492280 TRGC1P0CF51 173 aa10.19□□□□□ -0.78
HMGN1-220ENST00000492280 IRF2P14316 349 aa10.19□□□□□ -0.78
HMGN1-220ENST00000492280 GATA4P43694 442 aa10.19□□□□□ -0.78
HMGN1-220ENST00000492280 PAX5Q02548 391 aa10.19□□□□□ -0.78
HMGN1-220ENST00000492280 BSXQ3C1V8 233 aa10.19□□□□□ -0.78
HMGN1-220ENST00000492280 PDLIM3Q53GG5 364 aaPredicted RBP10.19□□□□□ -0.78
HMGN1-220ENST00000492280 TMEM108Q6UXF1 575 aa10.19□□□□□ -0.78
HMGN1-220ENST00000492280 CENPVQ7Z7K6 275 aaPredicted RBP10.19□□□□□ -0.78
HMGN1-220ENST00000492280 C1orf87Q8N0U7 546 aa10.19□□□□□ -0.78
HMGN1-220ENST00000492280 ZNF439Q8NDP4 499 aa10.19□□□□□ -0.78
HMGN1-220ENST00000492280 GPR61Q9BZJ8 451 aa10.19□□□□□ -0.78
HMGN1-220ENST00000492280 SEPSECSQ9HD40 501 aaKnown RBP10.19□□□□□ -0.78
HMGN1-220ENST00000492280 A0A0U1RQK1 487 aa10.19□□□□□ -0.78
HMGN1-220ENST00000492280 A0A1W2PPV4 95 aa10.19□□□□□ -0.78
HMGN1-220ENST00000492280 LYNX1G3V0Z9 82 aa10.19□□□□□ -0.78
HMGN1-220ENST00000492280 SOD3P08294 240 aa10.19□□□□□ -0.78
HMGN1-220ENST00000492280 SNRPCP09234 159 aaKnown RBP10.19□□□□□ -0.78
HMGN1-220ENST00000492280 CT45A6P0DMU7 189 aa10.19□□□□□ -0.78
HMGN1-220ENST00000492280 CT45A5P0DMU8 189 aa10.19□□□□□ -0.78
HMGN1-220ENST00000492280 CT45A7P0DMV0 189 aa10.19□□□□□ -0.78
HMGN1-220ENST00000492280 LYNX1P0DP58 116 aa10.19□□□□□ -0.78
HMGN1-220ENST00000492280 IGFBP2P18065 325 aa10.19□□□□□ -0.78
HMGN1-220ENST00000492280 TMEM241Q24JQ0 296 aa10.19□□□□□ -0.78
HMGN1-220ENST00000492280 C10orf55Q5SWW7 151 aa10.19□□□□□ -0.78
HMGN1-220ENST00000492280 FAM222BQ8WU58 562 aa10.19□□□□□ -0.78
HMGN1-220ENST00000492280 MRPL20Q9BYC9 149 aaKnown RBP10.19□□□□□ -0.78
HMGN1-220ENST00000492280 SAP30LQ9HAJ7 183 aa10.19□□□□□ -0.78
HMGN1-220ENST00000492280 SLC25A10Q9UBX3 287 aaPredicted RBP10.19□□□□□ -0.78
HMGN1-220ENST00000492280 TRBV23-1A0A0A0MS06 115 aa10.18□□□□□ -0.78
HMGN1-220ENST00000492280 C17orf112F2Z3M2 114 aa10.18□□□□□ -0.78
HMGN1-220ENST00000492280 FOXH1O75593 365 aa10.18□□□□□ -0.78
HMGN1-220ENST00000492280 NDUFB4O95168 129 aa10.18□□□□□ -0.78
HMGN1-220ENST00000492280 TNFSF4P23510 183 aa10.18□□□□□ -0.78
HMGN1-220ENST00000492280 NPY1RP25929 384 aa10.18□□□□□ -0.78
HMGN1-220ENST00000492280 GNB1P62873 340 aa10.18□□□□□ -0.78
HMGN1-220ENST00000492280 CR1LQ2VPA4 569 aa10.18□□□□□ -0.78
HMGN1-220ENST00000492280 ACOT6Q3I5F7 207 aaPredicted RBP10.18□□□□□ -0.78
HMGN1-220ENST00000492280 TCTEX1D1Q8N7M0 179 aa10.18□□□□□ -0.78
HMGN1-220ENST00000492280 SLC24A4Q8NFF2 622 aa10.18□□□□□ -0.78
HMGN1-220ENST00000492280 P2RX4Q99571 388 aa10.18□□□□□ -0.78
HMGN1-220ENST00000492280 NAT8Q9UHE5 227 aa10.18□□□□□ -0.78
HMGN1-220ENST00000492280 LINC00587B1AMM8 73 aa10.18□□□□□ -0.78
HMGN1-220ENST00000492280 APELAP0DMC3 54 aa10.18□□□□□ -0.78
HMGN1-220ENST00000492280 MAS1LP35410 378 aa10.18□□□□□ -0.78
HMGN1-220ENST00000492280 RPL31P62899 125 aaKnown RBP10.18□□□□□ -0.78
HMGN1-220ENST00000492280 KRTCAP3Q53RY4 240 aa10.18□□□□□ -0.78
HMGN1-220ENST00000492280 CYP2G1PQ6ZSU1 146 aa10.18□□□□□ -0.78
HMGN1-220ENST00000492280 SPACA3Q8IXA5 215 aa10.18□□□□□ -0.78
HMGN1-220ENST00000492280 OR13D1Q8NGV5 346 aa10.18□□□□□ -0.78
HMGN1-220ENST00000492280 FAM216AQ8WUB2 273 aa10.18□□□□□ -0.78
HMGN1-220ENST00000492280 SIRT7Q9NRC8 400 aa10.18□□□□□ -0.78
HMGN1-220ENST00000492280 SLC35D1Q9NTN3 355 aa10.18□□□□□ -0.78
HMGN1-220ENST00000492280 HIVEP3Q5T1R4 2406 aa10.17□□□□□ -0.78
HMGN1-220ENST00000492280 IGHV3-72A0A0B4J1Y9 119 aa10.17□□□□□ -0.78
HMGN1-220ENST00000492280 C17orf100A8MU93 164 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms