RNA–Protein interactions for RNA: ENST00000490663.1

C4A-256, Transcript of complement C4A (Rodgers blood group), human

TSL 2

Gene C4A, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C4A-256	ENST00000490663	ERVK-16	P61578	105 aa		14.39	□□□□□ -0.11
C4A-256	ENST00000490663	POU2AF1	Q16633	256 aa		14.39	□□□□□ -0.11
C4A-256	ENST00000490663	SP6	Q3SY56	376 aa		14.39	□□□□□ -0.11
C4A-256	ENST00000490663	SAMD5	Q5TGI4	173 aa		14.39	□□□□□ -0.11
C4A-256	ENST00000490663	ADAD2	Q8NCV1	583 aa	Known RBP	14.39	□□□□□ -0.11
C4A-256	ENST00000490663	OR11H1	Q8NG94	326 aa		14.39	□□□□□ -0.11
C4A-256	ENST00000490663	CD300LF	Q8TDQ1	290 aa		14.39	□□□□□ -0.11
C4A-256	ENST00000490663	NDUFA13	Q9P0J0	144 aa		14.39	□□□□□ -0.11
C4A-256	ENST00000490663	IGHV4OR15-8	A0A075B7B6	117 aa		14.38	□□□□□ -0.11
C4A-256	ENST00000490663		A0A087WW49	117 aa		14.38	□□□□□ -0.11
C4A-256	ENST00000490663	RND3	P61587	244 aa		14.38	□□□□□ -0.11
C4A-256	ENST00000490663	DEFA6	Q01524	100 aa		14.38	□□□□□ -0.11
C4A-256	ENST00000490663	ZNF45	Q02386	682 aa		14.38	□□□□□ -0.11
C4A-256	ENST00000490663	KLF9	Q13886	244 aa	Predicted RBP	14.38	□□□□□ -0.11
C4A-256	ENST00000490663	IZUMO4	Q1ZYL8	232 aa		14.38	□□□□□ -0.11
C4A-256	ENST00000490663	SRR	Q9GZT4	340 aa		14.38	□□□□□ -0.11
C4A-256	ENST00000490663	COPZ2	Q9P299	210 aa		14.38	□□□□□ -0.11
C4A-256	ENST00000490663	ANKRD34B	A5PLL1	514 aa		14.37	□□□□□ -0.11
C4A-256	ENST00000490663	LGALS1	P09382	135 aa	Known RBP	14.37	□□□□□ -0.11
C4A-256	ENST00000490663	SLURP1	P55000	103 aa		14.37	□□□□□ -0.11
C4A-256	ENST00000490663	SPANXN2	Q5MJ10	180 aa		14.37	□□□□□ -0.11
C4A-256	ENST00000490663	ZFAND1	Q8TCF1	268 aa		14.37	□□□□□ -0.11
C4A-256	ENST00000490663	ZNF486	Q96H40	463 aa	Predicted RBP	14.37	□□□□□ -0.11
C4A-256	ENST00000490663	SPIN2A	Q99865	258 aa		14.37	□□□□□ -0.11
C4A-256	ENST00000490663	SPIN2B	Q9BPZ2	258 aa		14.37	□□□□□ -0.11
C4A-256	ENST00000490663	RTBDN	Q9BSG5	229 aa	Predicted RBP	14.37	□□□□□ -0.11
C4A-256	ENST00000490663	DBX1	A6NMT0	343 aa		14.36	□□□□□ -0.11
C4A-256	ENST00000490663	CTSD	P07339	412 aa	Predicted RBP	14.36	□□□□□ -0.11
C4A-256	ENST00000490663	CD40LG	P29965	261 aa		14.36	□□□□□ -0.11
C4A-256	ENST00000490663	MAS1L	P35410	378 aa		14.36	□□□□□ -0.11
C4A-256	ENST00000490663	BEAN1	Q3B7T3	259 aa		14.36	□□□□□ -0.11
C4A-256	ENST00000490663	TOMM5	Q8N4H5	51 aa		14.36	□□□□□ -0.11
C4A-256	ENST00000490663	OR10W1	Q8NGF6	305 aa		14.36	□□□□□ -0.11
C4A-256	ENST00000490663	OR1N2	Q8NGR9	330 aa		14.36	□□□□□ -0.11
C4A-256	ENST00000490663	OR4A5	Q8NH83	315 aa		14.36	□□□□□ -0.11
C4A-256	ENST00000490663	SEC22A	Q96IW7	307 aa		14.36	□□□□□ -0.11
C4A-256	ENST00000490663	HINT2	Q9BX68	163 aa		14.36	□□□□□ -0.11
C4A-256	ENST00000490663	C5orf66	Q9H5L9	145 aa		14.36	□□□□□ -0.11
C4A-256	ENST00000490663	SLA2	Q9H6Q3	261 aa		14.36	□□□□□ -0.11
C4A-256	ENST00000490663	C14orf166	Q9Y224	244 aa	Known RBP	14.36	□□□□□ -0.11
C4A-256	ENST00000490663	DNAH3	Q8TD57	4116 aa		14.35	□□□□□ -0.11
C4A-256	ENST00000490663	C3orf85	A0A1B0GTC6	90 aa		14.35	□□□□□ -0.11
C4A-256	ENST00000490663		H0Y980	276 aa		14.35	□□□□□ -0.11
C4A-256	ENST00000490663	SLC6A1	P30531	599 aa		14.35	□□□□□ -0.11
C4A-256	ENST00000490663	ETV6	P41212	452 aa		14.35	□□□□□ -0.11
C4A-256	ENST00000490663	ZNF616	Q08AN1	781 aa		14.35	□□□□□ -0.11
C4A-256	ENST00000490663	FHL3	Q13643	280 aa		14.35	□□□□□ -0.11
C4A-256	ENST00000490663	BAK1	Q16611	211 aa		14.35	□□□□□ -0.11
C4A-256	ENST00000490663	ZNF57	Q68EA5	555 aa	Predicted RBP	14.35	□□□□□ -0.11
C4A-256	ENST00000490663	CCDC71L	Q8N9Z2	235 aa		14.35	□□□□□ -0.11
C4A-256	ENST00000490663	WFDC9	Q8NEX5	89 aa		14.35	□□□□□ -0.11
C4A-256	ENST00000490663	SDHC	Q99643	169 aa	Predicted RBP	14.35	□□□□□ -0.11
C4A-256	ENST00000490663	PRRT1	Q99946	306 aa		14.35	□□□□□ -0.11
C4A-256	ENST00000490663	AIFM2	Q9BRQ8	373 aa		14.35	□□□□□ -0.11
C4A-256	ENST00000490663	PRR13	Q9NZ81	148 aa		14.35	□□□□□ -0.11
C4A-256	ENST00000490663		S4R3C0	116 aa		14.35	□□□□□ -0.11
C4A-256	ENST00000490663	TEX50	A0A1B0GTY4	177 aa		14.34	□□□□□ -0.11
C4A-256	ENST00000490663	C13orf42	A0A1B0GVH6	325 aa		14.34	□□□□□ -0.11
C4A-256	ENST00000490663	LINC00854	A0A1B0GVQ3	168 aa		14.34	□□□□□ -0.11
C4A-256	ENST00000490663	OR2J3	O76001	311 aa		14.34	□□□□□ -0.11
C4A-256	ENST00000490663	IGKV1-5	P01602	117 aa		14.34	□□□□□ -0.11
C4A-256	ENST00000490663	TRBV12-3	P01733	135 aa		14.34	□□□□□ -0.11
C4A-256	ENST00000490663	SERPINE2	P07093	398 aa		14.34	□□□□□ -0.11
C4A-256	ENST00000490663	OR5AC1	P0C628	307 aa		14.34	□□□□□ -0.11
C4A-256	ENST00000490663	HOXD3	P31249	432 aa	Predicted RBP	14.34	□□□□□ -0.11
C4A-256	ENST00000490663	RHOG	P84095	191 aa		14.34	□□□□□ -0.11
C4A-256	ENST00000490663	RUNX1	Q01196	453 aa		14.34	□□□□□ -0.11
C4A-256	ENST00000490663	DPF1	Q92782	380 aa		14.34	□□□□□ -0.11
C4A-256	ENST00000490663	TMEM230	Q96A57	120 aa		14.34	□□□□□ -0.11
C4A-256	ENST00000490663	TMEM68	Q96MH6	324 aa		14.34	□□□□□ -0.11
C4A-256	ENST00000490663	COMMD5	Q9GZQ3	224 aa		14.34	□□□□□ -0.11
C4A-256	ENST00000490663	AKIP1	Q9NQ31	210 aa		14.34	□□□□□ -0.11
C4A-256	ENST00000490663	GPR132	Q9UNW8	380 aa		14.34	□□□□□ -0.11
C4A-256	ENST00000490663	SORL1	Q92673	2214 aa		14.34	□□□□□ -0.11
C4A-256	ENST00000490663	IGLC7	A0M8Q6	106 aa		14.33	□□□□□ -0.12
C4A-256	ENST00000490663		H3BUA1	57 aa		14.33	□□□□□ -0.12
C4A-256	ENST00000490663	PTBP1	P26599	531 aa	Known RBP eCLIP	14.33	□□□□□ -0.12
C4A-256	ENST00000490663	TRIM16L	Q309B1	348 aa		14.33	□□□□□ -0.12
C4A-256	ENST00000490663	CNPY1	Q3B7I2	92 aa		14.33	□□□□□ -0.12
C4A-256	ENST00000490663	TTC9C	Q8N5M4	171 aa		14.33	□□□□□ -0.12
C4A-256	ENST00000490663	LHFPL5	Q8TAF8	219 aa		14.33	□□□□□ -0.12
C4A-256	ENST00000490663	NAA60	Q9H7X0	242 aa		14.33	□□□□□ -0.12
C4A-256	ENST00000490663	SLC2A8	Q9NY64	477 aa		14.33	□□□□□ -0.12
C4A-256	ENST00000490663	SCP2D1	Q9UJQ7	156 aa		14.33	□□□□□ -0.12
C4A-256	ENST00000490663	OR51B2	Q9Y5P1	312 aa		14.33	□□□□□ -0.12
C4A-256	ENST00000490663		A0A0G2JRQ6	117 aa		14.32	□□□□□ -0.12
C4A-256	ENST00000490663	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	14.32	□□□□□ -0.12
C4A-256	ENST00000490663		A6NHS1	94 aa		14.32	□□□□□ -0.12
C4A-256	ENST00000490663	SNAPC5	O75971	98 aa		14.32	□□□□□ -0.12
C4A-256	ENST00000490663	IGHV3-23	P01764	117 aa		14.32	□□□□□ -0.12
C4A-256	ENST00000490663	PSMB6	P28072	239 aa		14.32	□□□□□ -0.12
C4A-256	ENST00000490663	EXOSC2	Q13868	293 aa	Known RBP	14.32	□□□□□ -0.12
C4A-256	ENST00000490663	SPINK9	Q5DT21	86 aa		14.32	□□□□□ -0.12
C4A-256	ENST00000490663	H2BFWT	Q7Z2G1	175 aa		14.32	□□□□□ -0.12
C4A-256	ENST00000490663	DCUN1D4	Q92564	292 aa		14.32	□□□□□ -0.12
C4A-256	ENST00000490663	RCC1L	Q96I51	464 aa	Known RBP	14.32	□□□□□ -0.12
C4A-256	ENST00000490663	QTRT1	Q9BXR0	403 aa	Known RBP	14.32	□□□□□ -0.12
C4A-256	ENST00000490663	C15orf61	A6NNL5	157 aa		14.31	□□□□□ -0.12
C4A-256	ENST00000490663	NPIPB5	A8MRT5	1133 aa		14.31	□□□□□ -0.12
C4A-256	ENST00000490663	LINC01619	G3V211	115 aa		14.31	□□□□□ -0.12

Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms