RNA–Protein interactions for RNA: ENST00000489443.2

LMX1A-204, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

TSL 1 (best)

Gene LMX1A, Length 1,255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-204ENST00000489443 WIPF1O43516 503 aa12.18□□□□□ -0.46
LMX1A-204ENST00000489443 GSTZ1O43708 216 aaPredicted RBP12.18□□□□□ -0.46
LMX1A-204ENST00000489443 PRH1P02810 166 aa12.18□□□□□ -0.46
LMX1A-204ENST00000489443 AKAIN1P0CW23 69 aa12.18□□□□□ -0.46
LMX1A-204ENST00000489443 G6PCP35575 357 aa12.18□□□□□ -0.46
LMX1A-204ENST00000489443 GPR61Q9BZJ8 451 aa12.18□□□□□ -0.46
LMX1A-204ENST00000489443 IGHV4OR15-8A0A075B7B6 117 aa12.17□□□□□ -0.46
LMX1A-204ENST00000489443 A0A087WW49 117 aa12.17□□□□□ -0.46
LMX1A-204ENST00000489443 A0A1B0GW64 132 aa12.17□□□□□ -0.46
LMX1A-204ENST00000489443 DISC1C4P0D8 188 aa12.17□□□□□ -0.46
LMX1A-204ENST00000489443 LINC01619G3V211 115 aa12.17□□□□□ -0.46
LMX1A-204ENST00000489443 ZNF735P0CB33 412 aa12.17□□□□□ -0.46
LMX1A-204ENST00000489443 HOXD3P31249 432 aaPredicted RBP12.17□□□□□ -0.46
LMX1A-204ENST00000489443 PIGPP57054 158 aa12.17□□□□□ -0.46
LMX1A-204ENST00000489443 PDLIM3Q53GG5 364 aaPredicted RBP12.17□□□□□ -0.46
LMX1A-204ENST00000489443 PYDC2Q56P42 97 aa12.17□□□□□ -0.46
LMX1A-204ENST00000489443 SLC25A42Q86VD7 318 aa12.17□□□□□ -0.46
LMX1A-204ENST00000489443 TTC9CQ8N5M4 171 aa12.17□□□□□ -0.46
LMX1A-204ENST00000489443 OR4C16Q8NGL9 310 aa12.17□□□□□ -0.46
LMX1A-204ENST00000489443 ZFAND1Q8TCF1 268 aa12.17□□□□□ -0.46
LMX1A-204ENST00000489443 MARCH1Q8TCQ1 289 aa12.17□□□□□ -0.46
LMX1A-204ENST00000489443 ZNF486Q96H40 463 aaPredicted RBP12.17□□□□□ -0.46
LMX1A-204ENST00000489443 COMMD5Q9GZQ3 224 aa12.17□□□□□ -0.46
LMX1A-204ENST00000489443 DNAH3Q8TD57 4116 aa12.17□□□□□ -0.46
LMX1A-204ENST00000489443 ANKRD20A5PA0PJZ0 165 aa12.16□□□□□ -0.46
LMX1A-204ENST00000489443 ANKRD34BA5PLL1 514 aa12.16□□□□□ -0.46
LMX1A-204ENST00000489443 RBMXL2O75526 392 aaKnown RBP12.16□□□□□ -0.46
LMX1A-204ENST00000489443 BRI3O95415 125 aa12.16□□□□□ -0.46
LMX1A-204ENST00000489443 HSPB1P04792 205 aaKnown RBP12.16□□□□□ -0.46
LMX1A-204ENST00000489443 AREGP15514 252 aa12.16□□□□□ -0.46
LMX1A-204ENST00000489443 SLURP1P55000 103 aa12.16□□□□□ -0.46
LMX1A-204ENST00000489443 RND3P61587 244 aa12.16□□□□□ -0.46
LMX1A-204ENST00000489443 RHOGP84095 191 aa12.16□□□□□ -0.46
LMX1A-204ENST00000489443 C19orf35Q6ZS72 473 aa12.16□□□□□ -0.46
LMX1A-204ENST00000489443 OR13C8Q8NGS7 320 aa12.16□□□□□ -0.46
LMX1A-204ENST00000489443 DCUN1D4Q92564 292 aa12.16□□□□□ -0.46
LMX1A-204ENST00000489443 THAP7Q9BT49 309 aaPredicted RBP12.16□□□□□ -0.46
LMX1A-204ENST00000489443 FAM212BQ9NTI7 297 aaPredicted RBP12.16□□□□□ -0.46
LMX1A-204ENST00000489443 COPZ2Q9P299 210 aa12.16□□□□□ -0.46
LMX1A-204ENST00000489443 ZNF257Q9Y2Q1 563 aa12.16□□□□□ -0.46
LMX1A-204ENST00000489443 SEC14L6B5MCN3 397 aa12.15□□□□□ -0.46
LMX1A-204ENST00000489443 SNAPC5O75971 98 aa12.15□□□□□ -0.46
LMX1A-204ENST00000489443 REG1AP05451 166 aa12.15□□□□□ -0.46
LMX1A-204ENST00000489443 SERPINE2P07093 398 aa12.15□□□□□ -0.46
LMX1A-204ENST00000489443 OR2B8PP59922 312 aa12.15□□□□□ -0.46
LMX1A-204ENST00000489443 ZNF45Q02386 682 aa12.15□□□□□ -0.46
LMX1A-204ENST00000489443 OR51S1Q8NGJ8 323 aa12.15□□□□□ -0.46
LMX1A-204ENST00000489443 DLX4Q92988 240 aaPredicted RBP12.15□□□□□ -0.46
LMX1A-204ENST00000489443 USMG5Q96IX5 58 aa12.15□□□□□ -0.46
LMX1A-204ENST00000489443 AKIP1Q9NQ31 210 aa12.15□□□□□ -0.46
LMX1A-204ENST00000489443 NSG2Q9Y328 171 aa12.15□□□□□ -0.46
LMX1A-204ENST00000489443 CGB1A6NKQ9 187 aa12.14□□□□□ -0.47
LMX1A-204ENST00000489443 NPIPB5A8MRT5 1133 aa12.14□□□□□ -0.47
LMX1A-204ENST00000489443 OVOL1O14753 267 aa12.14□□□□□ -0.47
LMX1A-204ENST00000489443 OR2J3O76001 311 aa12.14□□□□□ -0.47
LMX1A-204ENST00000489443 IGKV1-39P01597 117 aa12.14□□□□□ -0.47
LMX1A-204ENST00000489443 IGKV1D-39P04432 117 aa12.14□□□□□ -0.47
LMX1A-204ENST00000489443 PSMB6P28072 239 aa12.14□□□□□ -0.47
LMX1A-204ENST00000489443 KRTAP10-11P60412 298 aa12.14□□□□□ -0.47
LMX1A-204ENST00000489443 ATP5G2Q06055 141 aa12.14□□□□□ -0.47
LMX1A-204ENST00000489443 Q8N402 240 aa12.14□□□□□ -0.47
LMX1A-204ENST00000489443 CCDC71LQ8N9Z2 235 aa12.14□□□□□ -0.47
LMX1A-204ENST00000489443 MRGPRFQ96AM1 343 aa12.14□□□□□ -0.47
LMX1A-204ENST00000489443 PRRT1Q99946 306 aa12.14□□□□□ -0.47
LMX1A-204ENST00000489443 HINT2Q9BX68 163 aa12.14□□□□□ -0.47
LMX1A-204ENST00000489443 QTRT1Q9BXR0 403 aaKnown RBP12.14□□□□□ -0.47
LMX1A-204ENST00000489443 RANGRFQ9HD47 186 aaPredicted RBP12.14□□□□□ -0.47
LMX1A-204ENST00000489443 MCUBQ9NWR8 336 aa12.14□□□□□ -0.47
LMX1A-204ENST00000489443 AURKAIP1Q9NWT8 199 aaPredicted RBP12.14□□□□□ -0.47
LMX1A-204ENST00000489443 NDUFA13Q9P0J0 144 aa12.14□□□□□ -0.47
LMX1A-204ENST00000489443 C14orf166Q9Y224 244 aaKnown RBP12.14□□□□□ -0.47
LMX1A-204ENST00000489443 V9GYH0 126 aa12.14□□□□□ -0.47
LMX1A-204ENST00000489443 PRKDCP78527 4128 aaKnown RBP12.13□□□□□ -0.47
LMX1A-204ENST00000489443 TRBV9A0A0B4J1U6 114 aa12.13□□□□□ -0.47
LMX1A-204ENST00000489443 C3orf85A0A1B0GTC6 90 aa12.13□□□□□ -0.47
LMX1A-204ENST00000489443 TEX50A0A1B0GTY4 177 aa12.13□□□□□ -0.47
LMX1A-204ENST00000489443 FAM223BA6NKX1 122 aa12.13□□□□□ -0.47
LMX1A-204ENST00000489443 CTSDP07339 412 aaPredicted RBP12.13□□□□□ -0.47
LMX1A-204ENST00000489443 DEFA4P12838 97 aa12.13□□□□□ -0.47
LMX1A-204ENST00000489443 PTBP1P26599 531 aaKnown RBP eCLIP12.13□□□□□ -0.47
LMX1A-204ENST00000489443 ECI1P42126 302 aa12.13□□□□□ -0.47
LMX1A-204ENST00000489443 ZNF79Q15937 498 aa12.13□□□□□ -0.47
LMX1A-204ENST00000489443 SPANXN2Q5MJ10 180 aa12.13□□□□□ -0.47
LMX1A-204ENST00000489443 C9orf66Q5T8R8 295 aa12.13□□□□□ -0.47
LMX1A-204ENST00000489443 ZNF343Q6P1L6 599 aa12.13□□□□□ -0.47
LMX1A-204ENST00000489443 H2BFWTQ7Z2G1 175 aa12.13□□□□□ -0.47
LMX1A-204ENST00000489443 REC114Q7Z4M0 266 aa12.13□□□□□ -0.47
LMX1A-204ENST00000489443 CCDC190Q86UF4 302 aa12.13□□□□□ -0.47
LMX1A-204ENST00000489443 FAM223AQ8IWN6 122 aa12.13□□□□□ -0.47
LMX1A-204ENST00000489443 NECAP1Q8NC96 275 aa12.13□□□□□ -0.47
LMX1A-204ENST00000489443 OR10W1Q8NGF6 305 aa12.13□□□□□ -0.47
LMX1A-204ENST00000489443 OR1L8Q8NGR8 309 aa12.13□□□□□ -0.47
LMX1A-204ENST00000489443 SEC22AQ96IW7 307 aa12.13□□□□□ -0.47
LMX1A-204ENST00000489443 TP53RKQ96S44 253 aa12.13□□□□□ -0.47
LMX1A-204ENST00000489443 OR51B2Q9Y5P1 312 aa12.13□□□□□ -0.47
LMX1A-204ENST00000489443 IGLC7A0M8Q6 106 aa12.12□□□□□ -0.47
LMX1A-204ENST00000489443 H0Y980 276 aa12.12□□□□□ -0.47
LMX1A-204ENST00000489443 DHFRP00374 187 aa12.12□□□□□ -0.47
LMX1A-204ENST00000489443 CRYGCP07315 174 aa12.12□□□□□ -0.47
LMX1A-204ENST00000489443 FGF2P09038 288 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms