RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 TATDN3Q17R31 274 aa11.03□□□□□ -0.64
BRCA1-218ENST00000489037 STEAP1BQ6NZ63 245 aa11.03□□□□□ -0.64
BRCA1-218ENST00000489037 TBC1D26Q86UD7 250 aa11.03□□□□□ -0.64
BRCA1-218ENST00000489037 ZNF429Q86V71 674 aa11.03□□□□□ -0.64
BRCA1-218ENST00000489037 FAM223AQ8IWN6 122 aa11.03□□□□□ -0.64
BRCA1-218ENST00000489037 DLX4Q92988 240 aaPredicted RBP11.03□□□□□ -0.64
BRCA1-218ENST00000489037 ZNF486Q96H40 463 aaPredicted RBP11.03□□□□□ -0.64
BRCA1-218ENST00000489037 SLC2A9Q9NRM0 540 aa11.03□□□□□ -0.64
BRCA1-218ENST00000489037 FAM212BQ9NTI7 297 aaPredicted RBP11.03□□□□□ -0.64
BRCA1-218ENST00000489037 PEF1Q9UBV8 284 aaKnown RBP11.03□□□□□ -0.64
BRCA1-218ENST00000489037 RSL24D1Q9UHA3 163 aaKnown RBP11.03□□□□□ -0.64
BRCA1-218ENST00000489037 CEPT1Q9Y6K0 416 aa11.03□□□□□ -0.64
BRCA1-218ENST00000489037 MARCH11A6NNE9 402 aa11.02□□□□□ -0.65
BRCA1-218ENST00000489037 NPIPB5A8MRT5 1133 aa11.02□□□□□ -0.65
BRCA1-218ENST00000489037 DISC1C4P0D8 188 aa11.02□□□□□ -0.65
BRCA1-218ENST00000489037 CTDSPLO15194 276 aa11.02□□□□□ -0.65
BRCA1-218ENST00000489037 CYB5BO43169 146 aa11.02□□□□□ -0.65
BRCA1-218ENST00000489037 KRASP01116 189 aa11.02□□□□□ -0.65
BRCA1-218ENST00000489037 IL6RP08887 468 aaPredicted RBP11.02□□□□□ -0.65
BRCA1-218ENST00000489037 FGF2P09038 288 aa11.02□□□□□ -0.65
BRCA1-218ENST00000489037 DEFA4P12838 97 aa11.02□□□□□ -0.65
BRCA1-218ENST00000489037 RPA2P15927 270 aa11.02□□□□□ -0.65
BRCA1-218ENST00000489037 KRTAP10-11P60412 298 aa11.02□□□□□ -0.65
BRCA1-218ENST00000489037 RHOGP84095 191 aa11.02□□□□□ -0.65
BRCA1-218ENST00000489037 MEF2DQ14814 521 aa11.02□□□□□ -0.65
BRCA1-218ENST00000489037 SCGB2B2Q4G0G5 96 aa11.02□□□□□ -0.65
BRCA1-218ENST00000489037 DEFB121Q5J5C9 76 aa11.02□□□□□ -0.65
BRCA1-218ENST00000489037 FAM209BQ5JX69 171 aa11.02□□□□□ -0.65
BRCA1-218ENST00000489037 NECAP1Q8NC96 275 aa11.02□□□□□ -0.65
BRCA1-218ENST00000489037 ZFAND1Q8TCF1 268 aa11.02□□□□□ -0.65
BRCA1-218ENST00000489037 SMIM4Q8WVI0 70 aa11.02□□□□□ -0.65
BRCA1-218ENST00000489037 ELOVL1Q9BW60 279 aa11.02□□□□□ -0.65
BRCA1-218ENST00000489037 SLIRPQ9GZT3 109 aaKnown RBP11.02□□□□□ -0.65
BRCA1-218ENST00000489037 FABP12A6NFH5 140 aa11.01□□□□□ -0.65
BRCA1-218ENST00000489037 TEX22C9J3V5 150 aa11.01□□□□□ -0.65
BRCA1-218ENST00000489037 SAP30O75446 220 aa11.01□□□□□ -0.65
BRCA1-218ENST00000489037 PRH1P02810 166 aa11.01□□□□□ -0.65
BRCA1-218ENST00000489037 CD74P04233 296 aa11.01□□□□□ -0.65
BRCA1-218ENST00000489037 SERPINE2P07093 398 aa11.01□□□□□ -0.65
BRCA1-218ENST00000489037 HIST1H1BP16401 226 aaKnown RBP11.01□□□□□ -0.65
BRCA1-218ENST00000489037 PSMB6P28072 239 aa11.01□□□□□ -0.65
BRCA1-218ENST00000489037 S100A5P33763 92 aa11.01□□□□□ -0.65
BRCA1-218ENST00000489037 ECI1P42126 302 aa11.01□□□□□ -0.65
BRCA1-218ENST00000489037 THOC7Q6I9Y2 204 aaKnown RBP11.01□□□□□ -0.65
BRCA1-218ENST00000489037 ZNF343Q6P1L6 599 aa11.01□□□□□ -0.65
BRCA1-218ENST00000489037 CCDC71LQ8N9Z2 235 aa11.01□□□□□ -0.65
BRCA1-218ENST00000489037 TERB2Q8NHR7 220 aa11.01□□□□□ -0.65
BRCA1-218ENST00000489037 OR4C12Q96R67 309 aa11.01□□□□□ -0.65
BRCA1-218ENST00000489037 TSC22D3Q99576 134 aa11.01□□□□□ -0.65
BRCA1-218ENST00000489037 SRSF8Q9BRL6 282 aaKnown RBP11.01□□□□□ -0.65
BRCA1-218ENST00000489037 AKIP1Q9NQ31 210 aa11.01□□□□□ -0.65
BRCA1-218ENST00000489037 FKBP11Q9NYL4 201 aa11.01□□□□□ -0.65
BRCA1-218ENST00000489037 COPZ2Q9P299 210 aa11.01□□□□□ -0.65
BRCA1-218ENST00000489037 TRBV9A0A0B4J1U6 114 aa11□□□□□ -0.65
BRCA1-218ENST00000489037 TRAV3A0A0B4J244 114 aa11□□□□□ -0.65
BRCA1-218ENST00000489037 OR2J3O76001 311 aa11□□□□□ -0.65
BRCA1-218ENST00000489037 AKAIN1P0CW23 69 aa11□□□□□ -0.65
BRCA1-218ENST00000489037 G6PCP35575 357 aa11□□□□□ -0.65
BRCA1-218ENST00000489037 PPP5CP53041 499 aa11□□□□□ -0.65
BRCA1-218ENST00000489037 OR2B8PP59922 312 aa11□□□□□ -0.65
BRCA1-218ENST00000489037 RND3P61587 244 aa11□□□□□ -0.65
BRCA1-218ENST00000489037 DEFA5Q01523 94 aa11□□□□□ -0.65
BRCA1-218ENST00000489037 EXOSC2Q13868 293 aaKnown RBP11□□□□□ -0.65
BRCA1-218ENST00000489037 RPEL1Q2QD12 228 aa11□□□□□ -0.65
BRCA1-218ENST00000489037 ZNF585BQ52M93 769 aa11□□□□□ -0.65
BRCA1-218ENST00000489037 HSD17B13Q7Z5P4 300 aaPredicted RBP11□□□□□ -0.65
BRCA1-218ENST00000489037 LHFPL1Q86WI0 220 aa11□□□□□ -0.65
BRCA1-218ENST00000489037 CADM3Q8N126 398 aa11□□□□□ -0.65
BRCA1-218ENST00000489037 OR1L8Q8NGR8 309 aa11□□□□□ -0.65
BRCA1-218ENST00000489037 QTRT1Q9BXR0 403 aaKnown RBP11□□□□□ -0.65
BRCA1-218ENST00000489037 FBXL7Q9UJT9 491 aa11□□□□□ -0.65
BRCA1-218ENST00000489037 WI2-2373I1.2A0A1W2PRP0 233 aa10.99□□□□□ -0.65
BRCA1-218ENST00000489037 E7EUB6 86 aa10.99□□□□□ -0.65
BRCA1-218ENST00000489037 K7EIL1 84 aa10.99□□□□□ -0.65
BRCA1-218ENST00000489037 ATG12O94817 140 aa10.99□□□□□ -0.65
BRCA1-218ENST00000489037 CRYGCP07315 174 aa10.99□□□□□ -0.65
BRCA1-218ENST00000489037 TRAPPC2P0DI81 140 aa10.99□□□□□ -0.65
BRCA1-218ENST00000489037 TRAPPC2BP0DI82 140 aa10.99□□□□□ -0.65
BRCA1-218ENST00000489037 MYOD1P15172 320 aa10.99□□□□□ -0.65
BRCA1-218ENST00000489037 AREGP15514 252 aa10.99□□□□□ -0.65
BRCA1-218ENST00000489037 TNFSF8P32971 234 aa10.99□□□□□ -0.65
BRCA1-218ENST00000489037 PIGPP57054 158 aa10.99□□□□□ -0.65
BRCA1-218ENST00000489037 ZNF45Q02386 682 aa10.99□□□□□ -0.65
BRCA1-218ENST00000489037 C15orf32Q32M92 178 aa10.99□□□□□ -0.65
BRCA1-218ENST00000489037 ACSM6Q6P461 480 aa10.99□□□□□ -0.65
BRCA1-218ENST00000489037 H2BFWTQ7Z2G1 175 aa10.99□□□□□ -0.65
BRCA1-218ENST00000489037 OR6Q1Q8NGQ2 317 aa10.99□□□□□ -0.65
BRCA1-218ENST00000489037 HINT2Q9BX68 163 aa10.99□□□□□ -0.65
BRCA1-218ENST00000489037 NXF2Q9GZY0 626 aaKnown RBP10.99□□□□□ -0.65
BRCA1-218ENST00000489037 THYN1Q9P016 225 aa10.99□□□□□ -0.65
BRCA1-218ENST00000489037 PRNDQ9UKY0 176 aa10.99□□□□□ -0.65
BRCA1-218ENST00000489037 C14orf166Q9Y224 244 aaKnown RBP10.99□□□□□ -0.65
BRCA1-218ENST00000489037 OR51B2Q9Y5P1 312 aa10.99□□□□□ -0.65
BRCA1-218ENST00000489037 ZNF701M0R085 212 aaPredicted RBP10.98□□□□□ -0.65
BRCA1-218ENST00000489037 GSTZ1O43708 216 aaPredicted RBP10.98□□□□□ -0.65
BRCA1-218ENST00000489037 LY86O95711 162 aa10.98□□□□□ -0.65
BRCA1-218ENST00000489037 REG1AP05451 166 aa10.98□□□□□ -0.65
BRCA1-218ENST00000489037 CTRB1P17538 263 aa10.98□□□□□ -0.65
BRCA1-218ENST00000489037 PI3P19957 117 aa10.98□□□□□ -0.65
BRCA1-218ENST00000489037 PTBP1P26599 531 aaKnown RBP eCLIP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms