RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 ZNF735P0CB33 412 aa12.54□□□□□ -0.4
DDR1-246ENST00000485023 AKAIN1P0CW23 69 aa12.54□□□□□ -0.4
DDR1-246ENST00000485023 AREGP15514 252 aa12.54□□□□□ -0.4
DDR1-246ENST00000485023 S100A5P33763 92 aa12.54□□□□□ -0.4
DDR1-246ENST00000485023 MAS1LP35410 378 aa12.54□□□□□ -0.4
DDR1-246ENST00000485023 PIGPP57054 158 aa12.54□□□□□ -0.4
DDR1-246ENST00000485023 SSBP1Q04837 148 aaKnown RBP12.54□□□□□ -0.4
DDR1-246ENST00000485023 POU2AF1Q16633 256 aa12.54□□□□□ -0.4
DDR1-246ENST00000485023 OR13C8Q8NGS7 320 aa12.54□□□□□ -0.4
DDR1-246ENST00000485023 MARCH1Q8TCQ1 289 aa12.54□□□□□ -0.4
DDR1-246ENST00000485023 MCRIP2Q9BUT9 160 aaKnown RBP12.54□□□□□ -0.4
DDR1-246ENST00000485023 RABL2AQ9UBK7 228 aaPredicted RBP12.54□□□□□ -0.4
DDR1-246ENST00000485023 RABL2BQ9UNT1 228 aa12.54□□□□□ -0.4
DDR1-246ENST00000485023 NSG2Q9Y328 171 aa12.54□□□□□ -0.4
DDR1-246ENST00000485023 SEC14L6B5MCN3 397 aa12.53□□□□□ -0.4
DDR1-246ENST00000485023 DISC1C4P0D8 188 aa12.53□□□□□ -0.4
DDR1-246ENST00000485023 ZNF701M0R085 212 aaPredicted RBP12.53□□□□□ -0.4
DDR1-246ENST00000485023 OR2B8PP59922 312 aa12.53□□□□□ -0.4
DDR1-246ENST00000485023 KRTAP10-11P60412 298 aa12.53□□□□□ -0.4
DDR1-246ENST00000485023 RHOGP84095 191 aa12.53□□□□□ -0.4
DDR1-246ENST00000485023 ZNF45Q02386 682 aa12.53□□□□□ -0.4
DDR1-246ENST00000485023 MEF2DQ14814 521 aa12.53□□□□□ -0.4
DDR1-246ENST00000485023 PYDC2Q56P42 97 aa12.53□□□□□ -0.4
DDR1-246ENST00000485023 DCUN1D4Q92564 292 aa12.53□□□□□ -0.4
DDR1-246ENST00000485023 MRGPRFQ96AM1 343 aa12.53□□□□□ -0.4
DDR1-246ENST00000485023 SOSTQ9BQB4 213 aa12.53□□□□□ -0.4
DDR1-246ENST00000485023 COMMD5Q9GZQ3 224 aa12.53□□□□□ -0.4
DDR1-246ENST00000485023 AURKAIP1Q9NWT8 199 aaPredicted RBP12.53□□□□□ -0.4
DDR1-246ENST00000485023 V9GYH0 126 aa12.53□□□□□ -0.4
DDR1-246ENST00000485023 A0A0G2JLM5 398 aa12.52□□□□□ -0.41
DDR1-246ENST00000485023 ANKRD20A5PA0PJZ0 165 aa12.52□□□□□ -0.41
DDR1-246ENST00000485023 CGB1A6NKQ9 187 aa12.52□□□□□ -0.41
DDR1-246ENST00000485023 GSTZ1O43708 216 aaPredicted RBP12.52□□□□□ -0.41
DDR1-246ENST00000485023 OR2J3O76001 311 aa12.52□□□□□ -0.41
DDR1-246ENST00000485023 HSPB1P04792 205 aaKnown RBP12.52□□□□□ -0.41
DDR1-246ENST00000485023 TTC9CQ8N5M4 171 aa12.52□□□□□ -0.41
DDR1-246ENST00000485023 TERB2Q8NHR7 220 aa12.52□□□□□ -0.41
DDR1-246ENST00000485023 DLX4Q92988 240 aaPredicted RBP12.52□□□□□ -0.41
DDR1-246ENST00000485023 HINT2Q9BX68 163 aa12.52□□□□□ -0.41
DDR1-246ENST00000485023 GPR61Q9BZJ8 451 aa12.52□□□□□ -0.41
DDR1-246ENST00000485023 AKIP1Q9NQ31 210 aa12.52□□□□□ -0.41
DDR1-246ENST00000485023 COPZ2Q9P299 210 aa12.52□□□□□ -0.41
DDR1-246ENST00000485023 OVOL1O14753 267 aa12.51□□□□□ -0.41
DDR1-246ENST00000485023 IGKV1-39P01597 117 aa12.51□□□□□ -0.41
DDR1-246ENST00000485023 TRBV12-3P01733 135 aa12.51□□□□□ -0.41
DDR1-246ENST00000485023 IGKV1D-39P04432 117 aa12.51□□□□□ -0.41
DDR1-246ENST00000485023 EXOSC2Q13868 293 aaKnown RBP12.51□□□□□ -0.41
DDR1-246ENST00000485023 OR10W1Q8NGF6 305 aa12.51□□□□□ -0.41
DDR1-246ENST00000485023 OR51S1Q8NGJ8 323 aa12.51□□□□□ -0.41
DDR1-246ENST00000485023 ZNF486Q96H40 463 aaPredicted RBP12.51□□□□□ -0.41
DDR1-246ENST00000485023 TP53RKQ96S44 253 aa12.51□□□□□ -0.41
DDR1-246ENST00000485023 THAP7Q9BT49 309 aaPredicted RBP12.51□□□□□ -0.41
DDR1-246ENST00000485023 MCUBQ9NWR8 336 aa12.51□□□□□ -0.41
DDR1-246ENST00000485023 ZNF257Q9Y2Q1 563 aa12.51□□□□□ -0.41
DDR1-246ENST00000485023 S4R3C0 116 aa12.51□□□□□ -0.41
DDR1-246ENST00000485023 NPIPB5A8MRT5 1133 aa12.5□□□□□ -0.41
DDR1-246ENST00000485023 SNAPC5O75971 98 aa12.5□□□□□ -0.41
DDR1-246ENST00000485023 SERPINE2P07093 398 aa12.5□□□□□ -0.41
DDR1-246ENST00000485023 PSMB6P28072 239 aa12.5□□□□□ -0.41
DDR1-246ENST00000485023 RND3P61587 244 aa12.5□□□□□ -0.41
DDR1-246ENST00000485023 ZNF79Q15937 498 aa12.5□□□□□ -0.41
DDR1-246ENST00000485023 SP6Q3SY56 376 aa12.5□□□□□ -0.41
DDR1-246ENST00000485023 C9orf66Q5T8R8 295 aa12.5□□□□□ -0.41
DDR1-246ENST00000485023 SLC25A42Q86VD7 318 aa12.5□□□□□ -0.41
DDR1-246ENST00000485023 CCDC71LQ8N9Z2 235 aa12.5□□□□□ -0.41
DDR1-246ENST00000485023 ZFAND1Q8TCF1 268 aa12.5□□□□□ -0.41
DDR1-246ENST00000485023 QTRT1Q9BXR0 403 aaKnown RBP12.5□□□□□ -0.41
DDR1-246ENST00000485023 C14orf166Q9Y224 244 aaKnown RBP12.5□□□□□ -0.41
DDR1-246ENST00000485023 NOTCH3Q9UM47 2321 aa12.49□□□□□ -0.41
DDR1-246ENST00000485023 C3orf85A0A1B0GTC6 90 aa12.49□□□□□ -0.41
DDR1-246ENST00000485023 TEX50A0A1B0GTY4 177 aa12.49□□□□□ -0.41
DDR1-246ENST00000485023 IGLC7A0M8Q6 106 aa12.49□□□□□ -0.41
DDR1-246ENST00000485023 FAM223BA6NKX1 122 aa12.49□□□□□ -0.41
DDR1-246ENST00000485023 DBX1A6NMT0 343 aa12.49□□□□□ -0.41
DDR1-246ENST00000485023 H0Y980 276 aa12.49□□□□□ -0.41
DDR1-246ENST00000485023 BRI3O95415 125 aa12.49□□□□□ -0.41
DDR1-246ENST00000485023 IGHV3-23P01764 117 aa12.49□□□□□ -0.41
DDR1-246ENST00000485023 CTSDP07339 412 aaPredicted RBP12.49□□□□□ -0.41
DDR1-246ENST00000485023 DEFA4P12838 97 aa12.49□□□□□ -0.41
DDR1-246ENST00000485023 ATP5G2Q06055 141 aa12.49□□□□□ -0.41
DDR1-246ENST00000485023 CCDC190Q86UF4 302 aa12.49□□□□□ -0.41
DDR1-246ENST00000485023 FAM223AQ8IWN6 122 aa12.49□□□□□ -0.41
DDR1-246ENST00000485023 Q8N402 240 aa12.49□□□□□ -0.41
DDR1-246ENST00000485023 MRAPQ8TCY5 172 aa12.49□□□□□ -0.41
DDR1-246ENST00000485023 USMG5Q96IX5 58 aa12.49□□□□□ -0.41
DDR1-246ENST00000485023 PRRT1Q99946 306 aa12.49□□□□□ -0.41
DDR1-246ENST00000485023 RANGRFQ9HD47 186 aaPredicted RBP12.49□□□□□ -0.41
DDR1-246ENST00000485023 PEF1Q9UBV8 284 aaKnown RBP12.49□□□□□ -0.41
DDR1-246ENST00000485023 FBXL7Q9UJT9 491 aa12.49□□□□□ -0.41
DDR1-246ENST00000485023 OR51B2Q9Y5P1 312 aa12.49□□□□□ -0.41
DDR1-246ENST00000485023 DNAH3Q8TD57 4116 aa12.48□□□□□ -0.41
DDR1-246ENST00000485023 PRKDCP78527 4128 aaKnown RBP12.48□□□□□ -0.41
DDR1-246ENST00000485023 SAP30O75446 220 aa12.48□□□□□ -0.41
DDR1-246ENST00000485023 TRAPPC2P0DI81 140 aa12.48□□□□□ -0.41
DDR1-246ENST00000485023 TRAPPC2BP0DI82 140 aa12.48□□□□□ -0.41
DDR1-246ENST00000485023 CTRB1P17538 263 aa12.48□□□□□ -0.41
DDR1-246ENST00000485023 AKR1C2P52895 323 aa12.48□□□□□ -0.41
DDR1-246ENST00000485023 EGFEM1PQ0D2K5 195 aa12.48□□□□□ -0.41
DDR1-246ENST00000485023 IZUMO4Q1ZYL8 232 aa12.48□□□□□ -0.41
DDR1-246ENST00000485023 TRIM16LQ309B1 348 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms