RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 IGHV3-35A0A0C4DH35 117 aa11.94□□□□□ -0.5
NPHP4-208ENST00000478423 HIST3H3Q16695 136 aa11.94□□□□□ -0.5
NPHP4-208ENST00000478423 PRNTQ86SH4 94 aa11.94□□□□□ -0.5
NPHP4-208ENST00000478423 PSMG3Q9BT73 122 aaPredicted RBP11.94□□□□□ -0.5
NPHP4-208ENST00000478423 DPM3Q9P2X0 92 aa11.94□□□□□ -0.5
NPHP4-208ENST00000478423 MALRD1Q5VYJ5 2156 aa11.94□□□□□ -0.5
NPHP4-208ENST00000478423 HLA-DRB5Q30154 266 aa11.94□□□□□ -0.5
NPHP4-208ENST00000478423 LRP11Q86VZ4 500 aa11.94□□□□□ -0.5
NPHP4-208ENST00000478423 YTHDF2Q9Y5A9 579 aaKnown RBP11.94□□□□□ -0.5
NPHP4-208ENST00000478423 TMEM56-RWDD3S4R434 201 aa11.94□□□□□ -0.5
NPHP4-208ENST00000478423 PLXNA4Q9HCM2 1894 aa11.93□□□□□ -0.5
NPHP4-208ENST00000478423 TRBV23-1A0A0A0MS06 115 aa11.93□□□□□ -0.5
NPHP4-208ENST00000478423 WISP1O95388 367 aa11.93□□□□□ -0.5
NPHP4-208ENST00000478423 NAT1P18440 290 aa11.93□□□□□ -0.5
NPHP4-208ENST00000478423 MEF2CQ06413 473 aaPredicted RBP11.93□□□□□ -0.5
NPHP4-208ENST00000478423 FXYD3Q14802 87 aa11.93□□□□□ -0.5
NPHP4-208ENST00000478423 OR4A47Q6IF82 309 aa11.93□□□□□ -0.5
NPHP4-208ENST00000478423 RNF126Q9BV68 326 aa11.93□□□□□ -0.5
NPHP4-208ENST00000478423 LINC00312Q9Y6C7 94 aa11.93□□□□□ -0.5
NPHP4-208ENST00000478423 TECTAO75443 2155 aa11.93□□□□□ -0.5
NPHP4-208ENST00000478423 UTRNP46939 3433 aa11.93□□□□□ -0.5
NPHP4-208ENST00000478423 CSPG4Q6UVK1 2322 aa11.93□□□□□ -0.5
NPHP4-208ENST00000478423 F8VVB4 439 aa11.93□□□□□ -0.5
NPHP4-208ENST00000478423 F8VWA3 439 aa11.93□□□□□ -0.5
NPHP4-208ENST00000478423 H0YIZ8 118 aa11.93□□□□□ -0.5
NPHP4-208ENST00000478423 FOXH1O75593 365 aa11.93□□□□□ -0.5
NPHP4-208ENST00000478423 TIMP3P35625 211 aa11.93□□□□□ -0.5
NPHP4-208ENST00000478423 MFAP4P55083 255 aa11.93□□□□□ -0.5
NPHP4-208ENST00000478423 PCSK4Q6UW60 755 aa11.93□□□□□ -0.5
NPHP4-208ENST00000478423 ZNF497Q6ZNH5 498 aa11.93□□□□□ -0.5
NPHP4-208ENST00000478423 OR51G1Q8NGK1 321 aa11.93□□□□□ -0.5
NPHP4-208ENST00000478423 PIMREGQ9BSJ6 248 aa11.93□□□□□ -0.5
NPHP4-208ENST00000478423 PARD6AQ9NPB6 346 aa11.93□□□□□ -0.5
NPHP4-208ENST00000478423 IGHV3OR16-10A0A075B7F0 116 aa11.93□□□□□ -0.5
NPHP4-208ENST00000478423 HTN1P15515 57 aa11.93□□□□□ -0.5
NPHP4-208ENST00000478423 FCGR2BP31994 310 aaPredicted RBP11.93□□□□□ -0.5
NPHP4-208ENST00000478423 OTX1P32242 354 aaPredicted RBP11.93□□□□□ -0.5
NPHP4-208ENST00000478423 RPL30P62888 115 aaKnown RBP11.93□□□□□ -0.5
NPHP4-208ENST00000478423 LRRC75BQ2VPJ9 315 aa11.93□□□□□ -0.5
NPHP4-208ENST00000478423 FBXL15Q9H469 300 aa11.93□□□□□ -0.5
NPHP4-208ENST00000478423 ANKHD1Q8IWZ3 2542 aaKnown RBP11.93□□□□□ -0.5
NPHP4-208ENST00000478423 E9PLN8 166 aa11.92□□□□□ -0.5
NPHP4-208ENST00000478423 PDLIM4P50479 330 aa11.92□□□□□ -0.5
NPHP4-208ENST00000478423 RIGQ13278 110 aa11.92□□□□□ -0.5
NPHP4-208ENST00000478423 VKORC1Q9BQB6 163 aa11.92□□□□□ -0.5
NPHP4-208ENST00000478423 OR5AL1P0C617 328 aa11.92□□□□□ -0.5
NPHP4-208ENST00000478423 MEOX2P50222 304 aa11.92□□□□□ -0.5
NPHP4-208ENST00000478423 ZNF137PP52743 207 aa11.92□□□□□ -0.5
NPHP4-208ENST00000478423 FAM3BP58499 235 aaPredicted RBP11.92□□□□□ -0.5
NPHP4-208ENST00000478423 LY6DQ14210 128 aa11.92□□□□□ -0.5
NPHP4-208ENST00000478423 STPG3Q8N7X2 389 aa11.92□□□□□ -0.5
NPHP4-208ENST00000478423 EGR1P18146 543 aa11.92□□□□□ -0.5
NPHP4-208ENST00000478423 LY6EQ16553 131 aa11.92□□□□□ -0.5
NPHP4-208ENST00000478423 RNFT1Q5M7Z0 435 aa11.92□□□□□ -0.5
NPHP4-208ENST00000478423 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.92□□□□□ -0.5
NPHP4-208ENST00000478423 GATAD1Q8WUU5 269 aa11.92□□□□□ -0.5
NPHP4-208ENST00000478423 PRO1933Q9H354 126 aa11.92□□□□□ -0.5
NPHP4-208ENST00000478423 PITPNC1Q9UKF7 332 aa11.92□□□□□ -0.5
NPHP4-208ENST00000478423 LYNX1G3V0Z9 82 aa11.92□□□□□ -0.5
NPHP4-208ENST00000478423 H3BTX0 84 aa11.92□□□□□ -0.5
NPHP4-208ENST00000478423 LYNX1P0DP58 116 aa11.92□□□□□ -0.5
NPHP4-208ENST00000478423 NHLH1Q02575 133 aa11.92□□□□□ -0.5
NPHP4-208ENST00000478423 ZNF524Q96C55 264 aa11.92□□□□□ -0.5
NPHP4-208ENST00000478423 PCNTO95613 3336 aa11.91□□□□□ -0.5
NPHP4-208ENST00000478423 ATP5IP56385 69 aaPredicted RBP11.91□□□□□ -0.5
NPHP4-208ENST00000478423 NEU4Q8WWR8 484 aaPredicted RBP11.91□□□□□ -0.5
NPHP4-208ENST00000478423 GOLT1BQ9Y3E0 138 aa11.91□□□□□ -0.5
NPHP4-208ENST00000478423 ELOA3CA0A087WX78 387 aaPredicted RBP11.91□□□□□ -0.5
NPHP4-208ENST00000478423 A1L4Q6 167 aa11.91□□□□□ -0.5
NPHP4-208ENST00000478423 A8MWL6 223 aa11.91□□□□□ -0.5
NPHP4-208ENST00000478423 RRHO14718 337 aa11.91□□□□□ -0.5
NPHP4-208ENST00000478423 CRYBB3P26998 211 aa11.91□□□□□ -0.5
NPHP4-208ENST00000478423 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.91□□□□□ -0.5
NPHP4-208ENST00000478423 MRPL20Q9BYC9 149 aaKnown RBP11.91□□□□□ -0.5
NPHP4-208ENST00000478423 LCN2P80188 198 aa11.91□□□□□ -0.5
NPHP4-208ENST00000478423 MYO18BQ8IUG5 2567 aa11.9□□□□□ -0.5
NPHP4-208ENST00000478423 MOSP00540 346 aa11.9□□□□□ -0.5
NPHP4-208ENST00000478423 GBGT1Q8N5D6 347 aa11.9□□□□□ -0.5
NPHP4-208ENST00000478423 NHLRC2Q8NBF2 726 aa11.9□□□□□ -0.5
NPHP4-208ENST00000478423 SPSB4Q96A44 273 aa11.9□□□□□ -0.5
NPHP4-208ENST00000478423 PACRGQ96M98 296 aaPredicted RBP11.9□□□□□ -0.5
NPHP4-208ENST00000478423 YPEL1O60688 119 aa11.9□□□□□ -0.5
NPHP4-208ENST00000478423 MPZP25189 248 aa11.9□□□□□ -0.5
NPHP4-208ENST00000478423 CDKN1AP38936 164 aa11.9□□□□□ -0.5
NPHP4-208ENST00000478423 PRB3Q04118 309 aaPredicted RBP11.9□□□□□ -0.5
NPHP4-208ENST00000478423 IBA57Q5T440 356 aaKnown RBP11.9□□□□□ -0.5
NPHP4-208ENST00000478423 LHFPL1Q86WI0 220 aa11.9□□□□□ -0.5
NPHP4-208ENST00000478423 SGK494Q96LW2 274 aa11.9□□□□□ -0.5
NPHP4-208ENST00000478423 YPEL2Q96QA6 119 aa11.9□□□□□ -0.5
NPHP4-208ENST00000478423 NPCDR1Q9BY65 106 aa11.9□□□□□ -0.5
NPHP4-208ENST00000478423 PARLQ9H300 379 aa11.9□□□□□ -0.5
NPHP4-208ENST00000478423 FRMPD3Q5JV73 1810 aa11.9□□□□□ -0.5
NPHP4-208ENST00000478423 SRRM5B3KS81 715 aa11.9□□□□□ -0.5
NPHP4-208ENST00000478423 NPIPB11E5RHQ5 1161 aa11.9□□□□□ -0.5
NPHP4-208ENST00000478423 ISLRO14498 428 aa11.9□□□□□ -0.5
NPHP4-208ENST00000478423 PSPNO60542 156 aa11.9□□□□□ -0.5
NPHP4-208ENST00000478423 TRGC2P03986 189 aa11.9□□□□□ -0.5
NPHP4-208ENST00000478423 SELLP14151 372 aa11.9□□□□□ -0.5
NPHP4-208ENST00000478423 MORN2Q502X0 79 aa11.9□□□□□ -0.5
NPHP4-208ENST00000478423 SSBP3Q9BWW4 388 aaPredicted RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms