RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 RABL2AQ9UBK7 228 aaPredicted RBP12.03□□□□□ -0.48
HMGA1-206ENST00000478214 RABL2BQ9UNT1 228 aa12.03□□□□□ -0.48
HMGA1-206ENST00000478214 CGB1A6NKQ9 187 aa12.02□□□□□ -0.49
HMGA1-206ENST00000478214 MARCH11A6NNE9 402 aa12.02□□□□□ -0.49
HMGA1-206ENST00000478214 SEC14L6B5MCN3 397 aa12.02□□□□□ -0.49
HMGA1-206ENST00000478214 KRASP01116 189 aa12.02□□□□□ -0.49
HMGA1-206ENST00000478214 HSPB1P04792 205 aaKnown RBP12.02□□□□□ -0.49
HMGA1-206ENST00000478214 ZNF735P0CB33 412 aa12.02□□□□□ -0.49
HMGA1-206ENST00000478214 PI3P19957 117 aa12.02□□□□□ -0.49
HMGA1-206ENST00000478214 S100GP29377 79 aa12.02□□□□□ -0.49
HMGA1-206ENST00000478214 ZNF45Q02386 682 aa12.02□□□□□ -0.49
HMGA1-206ENST00000478214 EGFEM1PQ0D2K5 195 aa12.02□□□□□ -0.49
HMGA1-206ENST00000478214 SCGB2B2Q4G0G5 96 aa12.02□□□□□ -0.49
HMGA1-206ENST00000478214 FAAP20Q6NZ36 180 aa12.02□□□□□ -0.49
HMGA1-206ENST00000478214 REC114Q7Z4M0 266 aa12.02□□□□□ -0.49
HMGA1-206ENST00000478214 DLX4Q92988 240 aaPredicted RBP12.02□□□□□ -0.49
HMGA1-206ENST00000478214 SOSTQ9BQB4 213 aa12.02□□□□□ -0.49
HMGA1-206ENST00000478214 SLC2A9Q9NRM0 540 aa12.02□□□□□ -0.49
HMGA1-206ENST00000478214 TGP01266 2768 aa12.01□□□□□ -0.49
HMGA1-206ENST00000478214 ANKRD34BA5PLL1 514 aa12.01□□□□□ -0.49
HMGA1-206ENST00000478214 FABP12A6NFH5 140 aa12.01□□□□□ -0.49
HMGA1-206ENST00000478214 AREGP15514 252 aa12.01□□□□□ -0.49
HMGA1-206ENST00000478214 G6PCP35575 357 aa12.01□□□□□ -0.49
HMGA1-206ENST00000478214 PPP5CP53041 499 aa12.01□□□□□ -0.49
HMGA1-206ENST00000478214 ERVK-16P61578 105 aa12.01□□□□□ -0.49
HMGA1-206ENST00000478214 RHOGP84095 191 aa12.01□□□□□ -0.49
HMGA1-206ENST00000478214 SLC25A42Q86VD7 318 aa12.01□□□□□ -0.49
HMGA1-206ENST00000478214 TERB2Q8NHR7 220 aa12.01□□□□□ -0.49
HMGA1-206ENST00000478214 USMG5Q96IX5 58 aa12.01□□□□□ -0.49
HMGA1-206ENST00000478214 AKIP1Q9NQ31 210 aa12.01□□□□□ -0.49
HMGA1-206ENST00000478214 TRBV9A0A0B4J1U6 114 aa12□□□□□ -0.49
HMGA1-206ENST00000478214 DPPA5A6NC42 116 aa12□□□□□ -0.49
HMGA1-206ENST00000478214 NPIPB5A8MRT5 1133 aa12□□□□□ -0.49
HMGA1-206ENST00000478214 ZNF701M0R085 212 aaPredicted RBP12□□□□□ -0.49
HMGA1-206ENST00000478214 OVOL1O14753 267 aa12□□□□□ -0.49
HMGA1-206ENST00000478214 GSTZ1O43708 216 aaPredicted RBP12□□□□□ -0.49
HMGA1-206ENST00000478214 OR2B8PP59922 312 aa12□□□□□ -0.49
HMGA1-206ENST00000478214 RND3P61587 244 aa12□□□□□ -0.49
HMGA1-206ENST00000478214 MEF2DQ14814 521 aa12□□□□□ -0.49
HMGA1-206ENST00000478214 C9orf66Q5T8R8 295 aa12□□□□□ -0.49
HMGA1-206ENST00000478214 ZNF343Q6P1L6 599 aa12□□□□□ -0.49
HMGA1-206ENST00000478214 ZNF486Q96H40 463 aaPredicted RBP12□□□□□ -0.49
HMGA1-206ENST00000478214 FAM212BQ9NTI7 297 aaPredicted RBP12□□□□□ -0.49
HMGA1-206ENST00000478214 ZNF257Q9Y2Q1 563 aa12□□□□□ -0.49
HMGA1-206ENST00000478214 FAM223BA6NKX1 122 aa11.99□□□□□ -0.49
HMGA1-206ENST00000478214 OR2J3O76001 311 aa11.99□□□□□ -0.49
HMGA1-206ENST00000478214 IGKV1-39P01597 117 aa11.99□□□□□ -0.49
HMGA1-206ENST00000478214 TRBV12-3P01733 135 aa11.99□□□□□ -0.49
HMGA1-206ENST00000478214 IGKV1D-39P04432 117 aa11.99□□□□□ -0.49
HMGA1-206ENST00000478214 REG1AP05451 166 aa11.99□□□□□ -0.49
HMGA1-206ENST00000478214 AKAIN1P0CW23 69 aa11.99□□□□□ -0.49
HMGA1-206ENST00000478214 PSMB6P28072 239 aa11.99□□□□□ -0.49
HMGA1-206ENST00000478214 PIGPP57054 158 aa11.99□□□□□ -0.49
HMGA1-206ENST00000478214 FAM223AQ8IWN6 122 aa11.99□□□□□ -0.49
HMGA1-206ENST00000478214 OR4C16Q8NGL9 310 aa11.99□□□□□ -0.49
HMGA1-206ENST00000478214 OR13C8Q8NGS7 320 aa11.99□□□□□ -0.49
HMGA1-206ENST00000478214 MARCH1Q8TCQ1 289 aa11.99□□□□□ -0.49
HMGA1-206ENST00000478214 MRAPQ8TCY5 172 aa11.99□□□□□ -0.49
HMGA1-206ENST00000478214 MRGPRFQ96AM1 343 aa11.99□□□□□ -0.49
HMGA1-206ENST00000478214 COMMD5Q9GZQ3 224 aa11.99□□□□□ -0.49
HMGA1-206ENST00000478214 RANGRFQ9HD47 186 aaPredicted RBP11.99□□□□□ -0.49
HMGA1-206ENST00000478214 NSG2Q9Y328 171 aa11.99□□□□□ -0.49
HMGA1-206ENST00000478214 TEX50A0A1B0GTY4 177 aa11.98□□□□□ -0.49
HMGA1-206ENST00000478214 WI2-2373I1.2A0A1W2PRP0 233 aa11.98□□□□□ -0.49
HMGA1-206ENST00000478214 IGLC7A0M8Q6 106 aa11.98□□□□□ -0.49
HMGA1-206ENST00000478214 ANKRD20A5PA0PJZ0 165 aa11.98□□□□□ -0.49
HMGA1-206ENST00000478214 DISC1C4P0D8 188 aa11.98□□□□□ -0.49
HMGA1-206ENST00000478214 K7EIL1 84 aa11.98□□□□□ -0.49
HMGA1-206ENST00000478214 CRYGCP07315 174 aa11.98□□□□□ -0.49
HMGA1-206ENST00000478214 CTRB1P17538 263 aa11.98□□□□□ -0.49
HMGA1-206ENST00000478214 ATP5G2Q06055 141 aa11.98□□□□□ -0.49
HMGA1-206ENST00000478214 CTRB2Q6GPI1 263 aa11.98□□□□□ -0.49
HMGA1-206ENST00000478214 CADM3Q8N126 398 aa11.98□□□□□ -0.49
HMGA1-206ENST00000478214 NECAP1Q8NC96 275 aa11.98□□□□□ -0.49
HMGA1-206ENST00000478214 ZFAND1Q8TCF1 268 aa11.98□□□□□ -0.49
HMGA1-206ENST00000478214 FANCD2OSQ96PS1 177 aa11.98□□□□□ -0.49
HMGA1-206ENST00000478214 QTRT1Q9BXR0 403 aaKnown RBP11.98□□□□□ -0.49
HMGA1-206ENST00000478214 PEF1Q9UBV8 284 aaKnown RBP11.98□□□□□ -0.49
HMGA1-206ENST00000478214 SNAPC5O75971 98 aa11.97□□□□□ -0.49
HMGA1-206ENST00000478214 SERPINE2P07093 398 aa11.97□□□□□ -0.49
HMGA1-206ENST00000478214 FGF2P09038 288 aa11.97□□□□□ -0.49
HMGA1-206ENST00000478214 PTBP1P26599 531 aaKnown RBP eCLIP11.97□□□□□ -0.49
HMGA1-206ENST00000478214 EXOSC2Q13868 293 aaKnown RBP11.97□□□□□ -0.49
HMGA1-206ENST00000478214 OR10W1Q8NGF6 305 aa11.97□□□□□ -0.49
HMGA1-206ENST00000478214 OR1L8Q8NGR8 309 aa11.97□□□□□ -0.49
HMGA1-206ENST00000478214 SEC22AQ96IW7 307 aa11.97□□□□□ -0.49
HMGA1-206ENST00000478214 TP53RKQ96S44 253 aa11.97□□□□□ -0.49
HMGA1-206ENST00000478214 COPZ2Q9P299 210 aa11.97□□□□□ -0.49
HMGA1-206ENST00000478214 V9GYH0 126 aa11.97□□□□□ -0.49
HMGA1-206ENST00000478214 H0Y980 276 aa11.96□□□□□ -0.49
HMGA1-206ENST00000478214 SAP30O75446 220 aa11.96□□□□□ -0.49
HMGA1-206ENST00000478214 NDUFB8O95169 186 aa11.96□□□□□ -0.49
HMGA1-206ENST00000478214 CTSDP07339 412 aaPredicted RBP11.96□□□□□ -0.49
HMGA1-206ENST00000478214 TRAPPC2P0DI81 140 aa11.96□□□□□ -0.49
HMGA1-206ENST00000478214 TRAPPC2BP0DI82 140 aa11.96□□□□□ -0.49
HMGA1-206ENST00000478214 ZP3P21754 424 aa11.96□□□□□ -0.49
HMGA1-206ENST00000478214 S100A5P33763 92 aa11.96□□□□□ -0.49
HMGA1-206ENST00000478214 C15orf32Q32M92 178 aa11.96□□□□□ -0.49
HMGA1-206ENST00000478214 PYDC2Q56P42 97 aa11.96□□□□□ -0.49
HMGA1-206ENST00000478214 CCDC190Q86UF4 302 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms