RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.89□□□□□ -2.11
XRN1-211ENST00000477237 ZNF684Q5T5D7 378 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 DNAJC24Q6P3W2 148 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 SBSNQ6UWP8 590 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 TMEM207Q6UWW9 146 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 STAC2Q6ZMT1 411 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 HSD11B1LQ7Z5J1 315 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 C9orf40Q8IXQ3 194 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 EXOC3-AS1Q8N2X6 119 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 RNF175Q8N4F7 328 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 LINC00471Q8N535 108 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 CD177Q8N6Q3 437 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 OR52R1Q8NGF1 315 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 OR8B12Q8NGG6 310 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 OR51G1Q8NGK1 321 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 OR5AK2Q8NH90 309 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 ZNF502Q8TBZ5 544 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 RDH11Q8TC12 318 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 SSC4DQ8WTU2 575 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 HIST1H2BHQ93079 126 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 SLC25A46Q96AG3 418 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 STARD4Q96DR4 205 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 ACY3Q96HD9 319 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 CIB3Q96Q77 187 aaPredicted RBP1.89□□□□□ -2.11
XRN1-211ENST00000477237 PSMB7Q99436 277 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 SPIN2AQ99865 258 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 HIST1H2BNQ99877 126 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 HIST1H2BMQ99879 126 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 SPIN2BQ9BPZ2 258 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 EMC6Q9BV81 110 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 SFXN3Q9BWM7 321 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 GGTLC1Q9BX51 225 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 MRPL32Q9BYC8 188 aaKnown RBP1.89□□□□□ -2.11
XRN1-211ENST00000477237 PRRG4Q9BZD6 226 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 MED28Q9H204 178 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 JPT2Q9H910 190 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 EDA2RQ9HAV5 297 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 MARCH5Q9NX47 278 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 ZNF226Q9NYT6 803 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 CTSZQ9UBR2 303 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 MED31Q9Y3C7 131 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 IER3IP1Q9Y5U9 82 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 LINC00312Q9Y6C7 94 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 ATP7AQ04656 1500 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 DLC1Q96QB1 1528 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 ATRNO75882 1429 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 LOXHD1Q8IVV2 1947 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 TDRD6O60522 2096 aaKnown RBP1.89□□□□□ -2.11
XRN1-211ENST00000477237 ARID2Q68CP9 1835 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 MROH2BQ7Z745 1585 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 TRIP11Q15643 1979 aa1.89□□□□□ -2.11
XRN1-211ENST00000477237 SPHKAPQ2M3C7 1700 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 LRRC9Q6ZRR7 1453 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 ANK1P16157 1881 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 BRCA1P38398 1863 aaKnown RBP1.88□□□□□ -2.11
XRN1-211ENST00000477237 DOCK5Q9H7D0 1870 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 PTPN23Q9H3S7 1636 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 RBBP6Q7Z6E9 1792 aaKnown RBP1.88□□□□□ -2.11
XRN1-211ENST00000477237 SCN11AQ9UI33 1791 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.88□□□□□ -2.11
XRN1-211ENST00000477237 IQGAP1P46940 1657 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 IGHV2-26A0A0B4J1V2 119 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 TRAV5A0A0B4J249 113 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 A0A1B0GV50 99 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 ODAMA1E959 279 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 ZNF705GA8MUZ8 300 aaPredicted RBP1.88□□□□□ -2.11
XRN1-211ENST00000477237 ZNF670-ZNF695F2Z2N8 137 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 FNDC10F2Z333 226 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 H3BQ15 152 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 J3QQQ9 107 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 K7EMT4 169 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 K7EP34 96 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 CCL21O00585 134 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 OVOL1O14753 267 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 YPEL1O60688 119 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 TBL1XO60907 577 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 NCR2O95944 276 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 CXorf1O96002 111 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 TNFP01375 233 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 GPX1P07203 203 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 MRPL3P09001 348 aaKnown RBP1.88□□□□□ -2.11
XRN1-211ENST00000477237 SPINK8P0C7L1 97 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 IGLC6P0CF74 106 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 P0DMU3 169 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 FAM231AP0DMU4 169 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 FAM231CP0DMU5 169 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 BCKDHAP12694 445 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 NTF3P20783 257 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 POLR2IP36954 125 aaKnown RBP1.88□□□□□ -2.11
XRN1-211ENST00000477237 NUDT2P50583 147 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 FABP6P51161 128 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 CRISP3P54108 245 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 NDUFV3P56181 108 aaKnown RBP1.88□□□□□ -2.11
XRN1-211ENST00000477237 CLDN17P56750 224 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 TPPP2P59282 170 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 MYL5Q02045 173 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 SLC25A11Q02978 314 aaKnown RBP1.88□□□□□ -2.11
XRN1-211ENST00000477237 LOXL1Q08397 574 aaPredicted RBP1.88□□□□□ -2.11
XRN1-211ENST00000477237 TAF10Q12962 218 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 CATR1Q13166 79 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms