RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 EXOSC2Q13868 293 aaKnown RBP18.47■□□□□ 0.55
CPNE1-223ENST00000475146 ZNF429Q86V71 674 aa18.47■□□□□ 0.55
CPNE1-223ENST00000475146 SLC38A6Q8IZM9 456 aa18.47■□□□□ 0.55
CPNE1-223ENST00000475146 PRR25Q96S07 402 aa18.47■□□□□ 0.55
CPNE1-223ENST00000475146 RSRP1Q9BUV0 290 aa18.47■□□□□ 0.55
CPNE1-223ENST00000475146 C6orf62Q9GZU0 229 aaPredicted RBP18.47■□□□□ 0.55
CPNE1-223ENST00000475146 PEF1Q9UBV8 284 aaKnown RBP18.47■□□□□ 0.55
CPNE1-223ENST00000475146 MARCH11A6NNE9 402 aa18.46■□□□□ 0.55
CPNE1-223ENST00000475146 NPIPB5A8MRT5 1133 aa18.46■□□□□ 0.55
CPNE1-223ENST00000475146 OR2J3O76001 311 aa18.46■□□□□ 0.55
CPNE1-223ENST00000475146 TRBV12-3P01733 135 aa18.46■□□□□ 0.55
CPNE1-223ENST00000475146 PGAM2P15259 253 aa18.46■□□□□ 0.55
CPNE1-223ENST00000475146 AREGP15514 252 aa18.46■□□□□ 0.55
CPNE1-223ENST00000475146 TBPP20226 339 aa18.46■□□□□ 0.55
CPNE1-223ENST00000475146 UCP3P55916 312 aa18.46■□□□□ 0.55
CPNE1-223ENST00000475146 ACSM6Q6P461 480 aa18.46■□□□□ 0.55
CPNE1-223ENST00000475146 C19orf35Q6ZS72 473 aa18.46■□□□□ 0.55
CPNE1-223ENST00000475146 TBC1D26Q86UD7 250 aa18.46■□□□□ 0.55
CPNE1-223ENST00000475146 DIRAS2Q96HU8 199 aa18.46■□□□□ 0.55
CPNE1-223ENST00000475146 COMMD5Q9GZQ3 224 aa18.46■□□□□ 0.55
CPNE1-223ENST00000475146 TRBV9A0A0B4J1U6 114 aa18.45■□□□□ 0.54
CPNE1-223ENST00000475146 GABARAPH6UMI1 98 aa18.45■□□□□ 0.54
CPNE1-223ENST00000475146 LY86O95711 162 aa18.45■□□□□ 0.54
CPNE1-223ENST00000475146 TAS2R19P59542 299 aa18.45■□□□□ 0.54
CPNE1-223ENST00000475146 MRPS10P82664 201 aaKnown RBP18.45■□□□□ 0.54
CPNE1-223ENST00000475146 NECAP1Q8NC96 275 aa18.45■□□□□ 0.54
CPNE1-223ENST00000475146 DNAH3Q8TD57 4116 aa18.45■□□□□ 0.54
CPNE1-223ENST00000475146 DHFRP00374 187 aa18.44■□□□□ 0.54
CPNE1-223ENST00000475146 KRASP01116 189 aa18.44■□□□□ 0.54
CPNE1-223ENST00000475146 REG1AP05451 166 aa18.44■□□□□ 0.54
CPNE1-223ENST00000475146 PSMB6P28072 239 aa18.44■□□□□ 0.54
CPNE1-223ENST00000475146 G6PCP35575 357 aa18.44■□□□□ 0.54
CPNE1-223ENST00000475146 OR2B8PP59922 312 aa18.44■□□□□ 0.54
CPNE1-223ENST00000475146 DCTN2Q13561 401 aaKnown RBP18.44■□□□□ 0.54
CPNE1-223ENST00000475146 IL18Q14116 193 aa18.44■□□□□ 0.54
CPNE1-223ENST00000475146 ZNF585BQ52M93 769 aa18.44■□□□□ 0.54
CPNE1-223ENST00000475146 ARRDC1Q8N5I2 433 aa18.44■□□□□ 0.54
CPNE1-223ENST00000475146 TMEM229BQ8NBD8 167 aa18.44■□□□□ 0.54
CPNE1-223ENST00000475146 OR4C12Q96R67 309 aa18.44■□□□□ 0.54
CPNE1-223ENST00000475146 ELOVL1Q9BW60 279 aa18.44■□□□□ 0.54
CPNE1-223ENST00000475146 ZNF256Q9Y2P7 627 aaPredicted RBP18.44■□□□□ 0.54
CPNE1-223ENST00000475146 TGP01266 2768 aa18.44■□□□□ 0.54
CPNE1-223ENST00000475146 CCDC160A6NGH7 325 aa18.43■□□□□ 0.54
CPNE1-223ENST00000475146 CGB1A6NKQ9 187 aa18.43■□□□□ 0.54
CPNE1-223ENST00000475146 PPP5CP53041 499 aa18.43■□□□□ 0.54
CPNE1-223ENST00000475146 RPEL1Q2QD12 228 aa18.43■□□□□ 0.54
CPNE1-223ENST00000475146 C15orf32Q32M92 178 aa18.43■□□□□ 0.54
CPNE1-223ENST00000475146 FBXL7Q9UJT9 491 aa18.43■□□□□ 0.54
CPNE1-223ENST00000475146 RAB3DO95716 219 aa18.42■□□□□ 0.54
CPNE1-223ENST00000475146 CRYGCP07315 174 aa18.42■□□□□ 0.54
CPNE1-223ENST00000475146 DEFA4P12838 97 aa18.42■□□□□ 0.54
CPNE1-223ENST00000475146 OR4D10Q8NGI6 311 aa18.42■□□□□ 0.54
CPNE1-223ENST00000475146 SMIM4Q8WVI0 70 aa18.42■□□□□ 0.54
CPNE1-223ENST00000475146 QTRT1Q9BXR0 403 aaKnown RBP18.42■□□□□ 0.54
CPNE1-223ENST00000475146 SLIRPQ9GZT3 109 aaKnown RBP18.42■□□□□ 0.54
CPNE1-223ENST00000475146 CEPT1Q9Y6K0 416 aa18.42■□□□□ 0.54
CPNE1-223ENST00000475146 SNAPC5O75971 98 aa18.41■□□□□ 0.54
CPNE1-223ENST00000475146 CD74P04233 296 aa18.41■□□□□ 0.54
CPNE1-223ENST00000475146 FGF2P09038 288 aa18.41■□□□□ 0.54
CPNE1-223ENST00000475146 CTRB1P17538 263 aa18.41■□□□□ 0.54
CPNE1-223ENST00000475146 PI3P19957 117 aa18.41■□□□□ 0.54
CPNE1-223ENST00000475146 SYNJ2BPP57105 145 aa18.41■□□□□ 0.54
CPNE1-223ENST00000475146 SSBP1Q04837 148 aaKnown RBP18.41■□□□□ 0.54
CPNE1-223ENST00000475146 KLF5Q13887 457 aaPredicted RBP18.41■□□□□ 0.54
CPNE1-223ENST00000475146 SCGB2B2Q4G0G5 96 aa18.41■□□□□ 0.54
CPNE1-223ENST00000475146 CTRB2Q6GPI1 263 aa18.41■□□□□ 0.54
CPNE1-223ENST00000475146 STEAP1BQ6NZ63 245 aa18.41■□□□□ 0.54
CPNE1-223ENST00000475146 LHFPL1Q86WI0 220 aa18.41■□□□□ 0.54
CPNE1-223ENST00000475146 OR6Q1Q8NGQ2 317 aa18.41■□□□□ 0.54
CPNE1-223ENST00000475146 MCFD2Q8NI22 146 aa18.41■□□□□ 0.54
CPNE1-223ENST00000475146 RABL2AQ9UBK7 228 aaPredicted RBP18.41■□□□□ 0.54
CPNE1-223ENST00000475146 RABL2BQ9UNT1 228 aa18.41■□□□□ 0.54
CPNE1-223ENST00000475146 NSG2Q9Y328 171 aa18.41■□□□□ 0.54
CPNE1-223ENST00000475146 IGLC7A0M8Q6 106 aa18.4■□□□□ 0.54
CPNE1-223ENST00000475146 TATDN3Q17R31 274 aa18.4■□□□□ 0.54
CPNE1-223ENST00000475146 ZNF486Q96H40 463 aaPredicted RBP18.4■□□□□ 0.54
CPNE1-223ENST00000475146 FANCD2OSQ96PS1 177 aa18.4■□□□□ 0.54
CPNE1-223ENST00000475146 SRSF8Q9BRL6 282 aaKnown RBP18.4■□□□□ 0.54
CPNE1-223ENST00000475146 HINT2Q9BX68 163 aa18.4■□□□□ 0.54
CPNE1-223ENST00000475146 FAM212BQ9NTI7 297 aaPredicted RBP18.4■□□□□ 0.54
CPNE1-223ENST00000475146 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP18.39■□□□□ 0.53
CPNE1-223ENST00000475146 NDUFB8O95169 186 aa18.39■□□□□ 0.53
CPNE1-223ENST00000475146 TRAPPC2P0DI81 140 aa18.39■□□□□ 0.53
CPNE1-223ENST00000475146 TRAPPC2BP0DI82 140 aa18.39■□□□□ 0.53
CPNE1-223ENST00000475146 HIST1H1BP16401 226 aaKnown RBP18.39■□□□□ 0.53
CPNE1-223ENST00000475146 PIGPP57054 158 aa18.39■□□□□ 0.53
CPNE1-223ENST00000475146 THOC7Q6I9Y2 204 aaKnown RBP18.39■□□□□ 0.53
CPNE1-223ENST00000475146 HAPLN4Q86UW8 402 aa18.39■□□□□ 0.53
CPNE1-223ENST00000475146 OR9G4Q8NGQ1 327 aa18.39■□□□□ 0.53
CPNE1-223ENST00000475146 OR1L8Q8NGR8 309 aa18.39■□□□□ 0.53
CPNE1-223ENST00000475146 BMPR1BO00238 502 aa18.38■□□□□ 0.53
CPNE1-223ENST00000475146 CTDSPLO15194 276 aa18.38■□□□□ 0.53
CPNE1-223ENST00000475146 SPNP16150 400 aa18.38■□□□□ 0.53
CPNE1-223ENST00000475146 RND3P61587 244 aa18.38■□□□□ 0.53
CPNE1-223ENST00000475146 MEF2DQ14814 521 aa18.38■□□□□ 0.53
CPNE1-223ENST00000475146 FAM209BQ5JX69 171 aa18.38■□□□□ 0.53
CPNE1-223ENST00000475146 FAAP20Q6NZ36 180 aa18.38■□□□□ 0.53
CPNE1-223ENST00000475146 OR10W1Q8NGF6 305 aa18.38■□□□□ 0.53
CPNE1-223ENST00000475146 TERB2Q8NHR7 220 aa18.38■□□□□ 0.53
CPNE1-223ENST00000475146 PRNDQ9UKY0 176 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms