RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 FAM209BQ5JX69 171 aa10.49□□□□□ -0.73
CCDC78-209ENST00000474647 ZNF57Q68EA5 555 aaPredicted RBP10.49□□□□□ -0.73
CCDC78-209ENST00000474647 CLEC19AQ6UXS0 136 aa10.49□□□□□ -0.73
CCDC78-209ENST00000474647 SLC25A42Q86VD7 318 aa10.49□□□□□ -0.73
CCDC78-209ENST00000474647 MMD2Q8IY49 270 aa10.49□□□□□ -0.73
CCDC78-209ENST00000474647 TTC9CQ8N5M4 171 aa10.49□□□□□ -0.73
CCDC78-209ENST00000474647 S100A16Q96FQ6 103 aaKnown RBP10.49□□□□□ -0.73
CCDC78-209ENST00000474647 OVOL2Q9BRP0 275 aa10.49□□□□□ -0.73
CCDC78-209ENST00000474647 FBXL7Q9UJT9 491 aa10.49□□□□□ -0.73
CCDC78-209ENST00000474647 KCNK7Q9Y2U2 307 aa10.49□□□□□ -0.73
CCDC78-209ENST00000474647 A0A0J9YWU9 116 aa10.48□□□□□ -0.73
CCDC78-209ENST00000474647 FAM25AB3EWG3 89 aa10.48□□□□□ -0.73
CCDC78-209ENST00000474647 FAM25CB3EWG5 89 aa10.48□□□□□ -0.73
CCDC78-209ENST00000474647 FAM25GB3EWG6 89 aa10.48□□□□□ -0.73
CCDC78-209ENST00000474647 LGALS9O00182 355 aa10.48□□□□□ -0.73
CCDC78-209ENST00000474647 XRCC3O43542 346 aa10.48□□□□□ -0.73
CCDC78-209ENST00000474647 HIST1H1DP16402 221 aaKnown RBP10.48□□□□□ -0.73
CCDC78-209ENST00000474647 GNB3P16520 340 aa10.48□□□□□ -0.73
CCDC78-209ENST00000474647 ARL6IP1Q15041 203 aa10.48□□□□□ -0.73
CCDC78-209ENST00000474647 KCTD9Q7L273 389 aa10.48□□□□□ -0.73
CCDC78-209ENST00000474647 VKORC1L1Q8N0U8 176 aa10.48□□□□□ -0.73
CCDC78-209ENST00000474647 FYTTD1Q96QD9 318 aaKnown RBP10.48□□□□□ -0.73
CCDC78-209ENST00000474647 DIABLOQ9NR28 239 aa10.48□□□□□ -0.73
CCDC78-209ENST00000474647 MLXQ9UH92 298 aa10.48□□□□□ -0.73
CCDC78-209ENST00000474647 ZNF257Q9Y2Q1 563 aa10.48□□□□□ -0.73
CCDC78-209ENST00000474647 DMRT1Q9Y5R6 373 aa10.48□□□□□ -0.73
CCDC78-209ENST00000474647 DIRAS3O95661 229 aa10.47□□□□□ -0.73
CCDC78-209ENST00000474647 S100A5P33763 92 aa10.47□□□□□ -0.73
CCDC78-209ENST00000474647 TALDO1P37837 337 aa10.47□□□□□ -0.73
CCDC78-209ENST00000474647 TAS2R20P59543 309 aa10.47□□□□□ -0.73
CCDC78-209ENST00000474647 ARFRP1Q13795 201 aa10.47□□□□□ -0.73
CCDC78-209ENST00000474647 TMEM69Q5SWH9 247 aa10.47□□□□□ -0.73
CCDC78-209ENST00000474647 CNIH2Q6PI25 160 aa10.47□□□□□ -0.73
CCDC78-209ENST00000474647 BTNL8Q6UX41 500 aa10.47□□□□□ -0.73
CCDC78-209ENST00000474647 H1FOOQ8IZA3 346 aaPredicted RBP10.47□□□□□ -0.73
CCDC78-209ENST00000474647 UXS1Q8NBZ7 420 aa10.47□□□□□ -0.73
CCDC78-209ENST00000474647 CCDC140Q96MF4 163 aa10.47□□□□□ -0.73
CCDC78-209ENST00000474647 EXTL2Q9UBQ6 330 aa10.47□□□□□ -0.73
CCDC78-209ENST00000474647 MRPS7Q9Y2R9 242 aaKnown RBP10.47□□□□□ -0.73
CCDC78-209ENST00000474647 TMEM213A2RRL7 107 aa10.46□□□□□ -0.73
CCDC78-209ENST00000474647 RPL27AP46776 148 aaKnown RBP10.46□□□□□ -0.73
CCDC78-209ENST00000474647 EWSR1Q01844 656 aaKnown RBP eCLIP10.46□□□□□ -0.73
CCDC78-209ENST00000474647 ANKRD55Q3KP44 614 aa10.46□□□□□ -0.73
CCDC78-209ENST00000474647 CDNFQ49AH0 187 aa10.46□□□□□ -0.73
CCDC78-209ENST00000474647 FAM106AQ4KMX7 169 aa10.46□□□□□ -0.73
CCDC78-209ENST00000474647 LYG2Q86SG7 212 aa10.46□□□□□ -0.73
CCDC78-209ENST00000474647 GPHB5Q86YW7 130 aa10.46□□□□□ -0.73
CCDC78-209ENST00000474647 ZNF645Q8N7E2 425 aa10.46□□□□□ -0.73
CCDC78-209ENST00000474647 EEF1AKMT3Q96AZ1 226 aa10.46□□□□□ -0.73
CCDC78-209ENST00000474647 PRELID3BQ9Y3B1 194 aa10.46□□□□□ -0.73
CCDC78-209ENST00000474647 TRAV18A0A075B6X5 111 aa10.45□□□□□ -0.74
CCDC78-209ENST00000474647 IGKV1D-8A0A087WSZ0 117 aa10.45□□□□□ -0.74
CCDC78-209ENST00000474647 TMEM235A6NFC5 223 aa10.45□□□□□ -0.74
CCDC78-209ENST00000474647 NPIPB5A8MRT5 1133 aa10.45□□□□□ -0.74
CCDC78-209ENST00000474647 A8MWP6 167 aa10.45□□□□□ -0.74
CCDC78-209ENST00000474647 TEX22C9J3V5 150 aa10.45□□□□□ -0.74
CCDC78-209ENST00000474647 KBTBD11O94819 623 aa10.45□□□□□ -0.74
CCDC78-209ENST00000474647 NDUFB8O95169 186 aa10.45□□□□□ -0.74
CCDC78-209ENST00000474647 REG1AP05451 166 aa10.45□□□□□ -0.74
CCDC78-209ENST00000474647 TNFSF8P32971 234 aa10.45□□□□□ -0.74
CCDC78-209ENST00000474647 DEFB135Q30KP9 77 aa10.45□□□□□ -0.74
CCDC78-209ENST00000474647 TM4SF20Q53R12 229 aa10.45□□□□□ -0.74
CCDC78-209ENST00000474647 OR4A47Q6IF82 309 aa10.45□□□□□ -0.74
CCDC78-209ENST00000474647 RBPMS2Q6ZRY4 209 aaKnown RBP10.45□□□□□ -0.74
CCDC78-209ENST00000474647 LINC00299Q6ZSB3 139 aa10.45□□□□□ -0.74
CCDC78-209ENST00000474647 CCDC190Q86UF4 302 aa10.45□□□□□ -0.74
CCDC78-209ENST00000474647 DIRAS2Q96HU8 199 aa10.45□□□□□ -0.74
CCDC78-209ENST00000474647 AUNIPQ9H7T9 357 aa10.45□□□□□ -0.74
CCDC78-209ENST00000474647 DHFRP00374 187 aa10.44□□□□□ -0.74
CCDC78-209ENST00000474647 AREGP15514 252 aa10.44□□□□□ -0.74
CCDC78-209ENST00000474647 RPL30P62888 115 aaKnown RBP10.44□□□□□ -0.74
CCDC78-209ENST00000474647 HACD4Q5VWC8 232 aa10.44□□□□□ -0.74
CCDC78-209ENST00000474647 RPP25LQ8N5L8 163 aaKnown RBP10.44□□□□□ -0.74
CCDC78-209ENST00000474647 OR1L6Q8NGR2 347 aa10.44□□□□□ -0.74
CCDC78-209ENST00000474647 OR4S2Q8NH73 311 aa10.44□□□□□ -0.74
CCDC78-209ENST00000474647 VSTM2AQ8TAG5 236 aa10.44□□□□□ -0.74
CCDC78-209ENST00000474647 TCTEX1D2Q8WW35 142 aa10.44□□□□□ -0.74
CCDC78-209ENST00000474647 OR2A7Q96R45 310 aa10.44□□□□□ -0.74
CCDC78-209ENST00000474647 RABL2AQ9UBK7 228 aaPredicted RBP10.44□□□□□ -0.74
CCDC78-209ENST00000474647 UBQLN2Q9UHD9 624 aa10.44□□□□□ -0.74
CCDC78-209ENST00000474647 ELF5Q9UKW6 265 aaPredicted RBP10.44□□□□□ -0.74
CCDC78-209ENST00000474647 RABL2BQ9UNT1 228 aa10.44□□□□□ -0.74
CCDC78-209ENST00000474647 E7EUB6 86 aa10.43□□□□□ -0.74
CCDC78-209ENST00000474647 SPRY2O43597 315 aa10.43□□□□□ -0.74
CCDC78-209ENST00000474647 HLA-DQB1P01920 261 aa10.43□□□□□ -0.74
CCDC78-209ENST00000474647 IL6RP08887 468 aaPredicted RBP10.43□□□□□ -0.74
CCDC78-209ENST00000474647 DEFA4P12838 97 aa10.43□□□□□ -0.74
CCDC78-209ENST00000474647 NFYAP23511 347 aaPredicted RBP10.43□□□□□ -0.74
CCDC78-209ENST00000474647 ETV6P41212 452 aa10.43□□□□□ -0.74
CCDC78-209ENST00000474647 APOC4P55056 127 aa10.43□□□□□ -0.74
CCDC78-209ENST00000474647 GNG2P59768 71 aa10.43□□□□□ -0.74
CCDC78-209ENST00000474647 TNFRSF9Q07011 255 aa10.43□□□□□ -0.74
CCDC78-209ENST00000474647 ZNF585BQ52M93 769 aa10.43□□□□□ -0.74
CCDC78-209ENST00000474647 CEMP1Q6PRD7 247 aaPredicted RBP10.43□□□□□ -0.74
CCDC78-209ENST00000474647 SSX9Q7RTT3 188 aa10.43□□□□□ -0.74
CCDC78-209ENST00000474647 C15orf40Q8WUR7 153 aa10.43□□□□□ -0.74
CCDC78-209ENST00000474647 FANCD2OSQ96PS1 177 aa10.43□□□□□ -0.74
CCDC78-209ENST00000474647 SOSTQ9BQB4 213 aa10.43□□□□□ -0.74
CCDC78-209ENST00000474647 KLK5Q9Y337 293 aaPredicted RBP10.43□□□□□ -0.74
CCDC78-209ENST00000474647 RBMX2Q9Y388 322 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms