RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 C15orf61A6NNL5 157 aa5.09□□□□□ -1.6
HERC4-209ENST00000473533 PSPNO60542 156 aa5.09□□□□□ -1.6
HERC4-209ENST00000473533 GFRA3O60609 400 aa5.09□□□□□ -1.6
HERC4-209ENST00000473533 IER3P46695 156 aa5.09□□□□□ -1.6
HERC4-209ENST00000473533 TRIP6Q15654 476 aaKnown RBP5.09□□□□□ -1.6
HERC4-209ENST00000473533 EFNB3Q15768 340 aa5.09□□□□□ -1.6
HERC4-209ENST00000473533 MIC13Q5XKP0 118 aa5.09□□□□□ -1.6
HERC4-209ENST00000473533 STPG3Q8N7X2 389 aa5.09□□□□□ -1.6
HERC4-209ENST00000473533 VN1R17PQ8TDU5 208 aa5.09□□□□□ -1.6
HERC4-209ENST00000473533 COQ2Q96H96 371 aa5.09□□□□□ -1.6
HERC4-209ENST00000473533 DMDP11532 3685 aa5.09□□□□□ -1.6
HERC4-209ENST00000473533 F2RL2O00254 374 aa5.08□□□□□ -1.6
HERC4-209ENST00000473533 GPX1P07203 203 aa5.08□□□□□ -1.6
HERC4-209ENST00000473533 OR9G9P0C7N8 305 aa5.08□□□□□ -1.6
HERC4-209ENST00000473533 CBLN1P23435 193 aa5.08□□□□□ -1.6
HERC4-209ENST00000473533 AMTP48728 403 aa5.08□□□□□ -1.6
HERC4-209ENST00000473533 HNRNPA3P51991 378 aaKnown RBP5.08□□□□□ -1.6
HERC4-209ENST00000473533 FOXG1P55316 489 aaPredicted RBP5.08□□□□□ -1.6
HERC4-209ENST00000473533 FOXF2Q12947 444 aa5.08□□□□□ -1.6
HERC4-209ENST00000473533 PSG7Q13046 419 aa5.08□□□□□ -1.6
HERC4-209ENST00000473533 CR1LQ2VPA4 569 aa5.08□□□□□ -1.6
HERC4-209ENST00000473533 Q6ZWC4 215 aa5.08□□□□□ -1.6
HERC4-209ENST00000473533 Q8N7P7 452 aa5.08□□□□□ -1.6
HERC4-209ENST00000473533 UBALD1Q8TB05 177 aa5.08□□□□□ -1.6
HERC4-209ENST00000473533 KLF14Q8TD94 323 aaPredicted RBP5.08□□□□□ -1.6
HERC4-209ENST00000473533 OR2V2Q96R30 315 aa5.08□□□□□ -1.6
HERC4-209ENST00000473533 TXN2Q99757 166 aa5.08□□□□□ -1.6
HERC4-209ENST00000473533 TMEM140Q9NV12 185 aa5.08□□□□□ -1.6
HERC4-209ENST00000473533 CHD3Q12873 2000 aaKnown RBP5.08□□□□□ -1.6
HERC4-209ENST00000473533 PRSS46E5RG02 174 aa5.08□□□□□ -1.6
HERC4-209ENST00000473533 KRTDAPP60985 99 aa5.08□□□□□ -1.6
HERC4-209ENST00000473533 RELBQ01201 579 aa5.08□□□□□ -1.6
HERC4-209ENST00000473533 POU2AF1Q16633 256 aa5.08□□□□□ -1.6
HERC4-209ENST00000473533 MORN2Q502X0 79 aa5.08□□□□□ -1.6
HERC4-209ENST00000473533 DMRTA1Q5VZB9 504 aa5.08□□□□□ -1.6
HERC4-209ENST00000473533 Q6ZT83 130 aa5.08□□□□□ -1.6
HERC4-209ENST00000473533 OR4P4Q8NGL7 312 aa5.08□□□□□ -1.6
HERC4-209ENST00000473533 WIPF2Q8TF74 440 aaPredicted RBP5.08□□□□□ -1.6
HERC4-209ENST00000473533 STARD4Q96DR4 205 aa5.08□□□□□ -1.6
HERC4-209ENST00000473533 SMIM12Q96EX1 92 aa5.08□□□□□ -1.6
HERC4-209ENST00000473533 IL17BQ9UHF5 180 aa5.08□□□□□ -1.6
HERC4-209ENST00000473533 PAM16Q9Y3D7 125 aa5.08□□□□□ -1.6
HERC4-209ENST00000473533 ROS1P08922 2347 aa5.08□□□□□ -1.6
HERC4-209ENST00000473533 IZUMO1RA6ND01 250 aa5.08□□□□□ -1.6
HERC4-209ENST00000473533 LINC00473A8K010 186 aa5.08□□□□□ -1.6
HERC4-209ENST00000473533 LAMTOR5O43504 91 aa5.08□□□□□ -1.6
HERC4-209ENST00000473533 PRDX2P32119 198 aa5.08□□□□□ -1.6
HERC4-209ENST00000473533 CFHR2P36980 270 aa5.08□□□□□ -1.6
HERC4-209ENST00000473533 ARG2P78540 354 aa5.08□□□□□ -1.6
HERC4-209ENST00000473533 MBNL2Q5VZF2 373 aaKnown RBP5.08□□□□□ -1.6
HERC4-209ENST00000473533 WDR82Q6UXN9 313 aa5.08□□□□□ -1.6
HERC4-209ENST00000473533 FAM169BQ8N8A8 192 aa5.08□□□□□ -1.6
HERC4-209ENST00000473533 OR13A1Q8NGR1 328 aa5.08□□□□□ -1.6
HERC4-209ENST00000473533 OR1L4Q8NGR5 311 aa5.08□□□□□ -1.6
HERC4-209ENST00000473533 ATG101Q9BSB4 218 aa5.08□□□□□ -1.6
HERC4-209ENST00000473533 LRFN3Q9BTN0 628 aa5.08□□□□□ -1.6
HERC4-209ENST00000473533 DERL1Q9BUN8 251 aa5.08□□□□□ -1.6
HERC4-209ENST00000473533 LPAR2Q9HBW0 351 aa5.08□□□□□ -1.6
HERC4-209ENST00000473533 COLQQ9Y215 455 aaPredicted RBP5.08□□□□□ -1.6
HERC4-209ENST00000473533 TBL2Q9Y4P3 447 aaKnown RBP5.08□□□□□ -1.6
HERC4-209ENST00000473533 V9GYV3 84 aa5.08□□□□□ -1.6
HERC4-209ENST00000473533 GRIFINA4D1Z8 144 aa5.07□□□□□ -1.6
HERC4-209ENST00000473533 C15orf65H3BRN8 121 aa5.07□□□□□ -1.6
HERC4-209ENST00000473533 ZNF324O75467 553 aaPredicted RBP5.07□□□□□ -1.6
HERC4-209ENST00000473533 CELA3AP09093 270 aa5.07□□□□□ -1.6
HERC4-209ENST00000473533 PRR20EP86478 221 aa5.07□□□□□ -1.6
HERC4-209ENST00000473533 PRR20CP86479 221 aa5.07□□□□□ -1.6
HERC4-209ENST00000473533 PRR20DP86480 221 aa5.07□□□□□ -1.6
HERC4-209ENST00000473533 PRR20BP86481 221 aa5.07□□□□□ -1.6
HERC4-209ENST00000473533 PRR20AP86496 221 aa5.07□□□□□ -1.6
HERC4-209ENST00000473533 SPATA45Q537H7 98 aa5.07□□□□□ -1.6
HERC4-209ENST00000473533 CENPWQ5EE01 88 aa5.07□□□□□ -1.6
HERC4-209ENST00000473533 STUMQ69YW2 141 aa5.07□□□□□ -1.6
HERC4-209ENST00000473533 OR8I2Q8N0Y5 310 aa5.07□□□□□ -1.6
HERC4-209ENST00000473533 ORAOV1Q8WV07 137 aa5.07□□□□□ -1.6
HERC4-209ENST00000473533 NEUROG1Q92886 237 aa5.07□□□□□ -1.6
HERC4-209ENST00000473533 C5orf30Q96GV9 206 aa5.07□□□□□ -1.6
HERC4-209ENST00000473533 SAP30LQ9HAJ7 183 aa5.07□□□□□ -1.6
HERC4-209ENST00000473533 BET1LQ9NYM9 111 aa5.07□□□□□ -1.6
HERC4-209ENST00000473533 MRPS16Q9Y3D3 137 aaKnown RBP5.07□□□□□ -1.6
HERC4-209ENST00000473533 YTHDF2Q9Y5A9 579 aaKnown RBP5.07□□□□□ -1.6
HERC4-209ENST00000473533 SOX21Q9Y651 276 aaPredicted RBP5.07□□□□□ -1.6
HERC4-209ENST00000473533 NBASA2RRP1 2371 aa5.07□□□□□ -1.6
HERC4-209ENST00000473533 APCSP02743 223 aa5.07□□□□□ -1.6
HERC4-209ENST00000473533 IRF2P14316 349 aa5.07□□□□□ -1.6
HERC4-209ENST00000473533 EGR1P18146 543 aa5.07□□□□□ -1.6
HERC4-209ENST00000473533 PRRX1P54821 245 aa5.07□□□□□ -1.6
HERC4-209ENST00000473533 CASP6P55212 293 aa5.07□□□□□ -1.6
HERC4-209ENST00000473533 BRWD1-AS2P59051 145 aa5.07□□□□□ -1.6
HERC4-209ENST00000473533 BPIFB3P59826 476 aa5.07□□□□□ -1.6
HERC4-209ENST00000473533 PSG5Q15238 335 aa5.07□□□□□ -1.6
HERC4-209ENST00000473533 IBA57Q5T440 356 aaKnown RBP5.07□□□□□ -1.6
HERC4-209ENST00000473533 PET117Q6UWS5 81 aa5.07□□□□□ -1.6
HERC4-209ENST00000473533 FAM231DQ6ZW35 169 aa5.07□□□□□ -1.6
HERC4-209ENST00000473533 TCF23Q7RTU1 214 aa5.07□□□□□ -1.6
HERC4-209ENST00000473533 ATP5L2Q7Z4Y8 100 aa5.07□□□□□ -1.6
HERC4-209ENST00000473533 ZNF114Q8NC26 417 aa5.07□□□□□ -1.6
HERC4-209ENST00000473533 MDS2Q8NDY4 140 aa5.07□□□□□ -1.6
HERC4-209ENST00000473533 LRRC29Q8WV35 223 aa5.07□□□□□ -1.6
HERC4-209ENST00000473533 CACNG8Q8WXS5 425 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms