RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 TEX13DA0A0J9YY54 714 aaPredicted RBP10.58□□□□□ -0.72
HMGN1-211ENST00000471260 RAB19A4D1S5 217 aa10.58□□□□□ -0.72
HMGN1-211ENST00000471260 CCL24O00175 119 aa10.58□□□□□ -0.72
HMGN1-211ENST00000471260 SOCS1O15524 211 aa10.58□□□□□ -0.72
HMGN1-211ENST00000471260 SPDEFO95238 335 aa10.58□□□□□ -0.72
HMGN1-211ENST00000471260 HLA-DRB1P01911 266 aa10.58□□□□□ -0.72
HMGN1-211ENST00000471260 RLN2P04090 185 aa10.58□□□□□ -0.72
HMGN1-211ENST00000471260 SAA2P0DJI9 122 aaPredicted RBP10.58□□□□□ -0.72
HMGN1-211ENST00000471260 TPT1P13693 172 aaKnown RBP10.58□□□□□ -0.72
HMGN1-211ENST00000471260 PSMB6P28072 239 aa10.58□□□□□ -0.72
HMGN1-211ENST00000471260 MC5RP33032 325 aa10.58□□□□□ -0.72
HMGN1-211ENST00000471260 LHFPL5Q8TAF8 219 aa10.58□□□□□ -0.72
HMGN1-211ENST00000471260 CYYR1Q96J86 154 aa10.58□□□□□ -0.72
HMGN1-211ENST00000471260 MRPL20Q9BYC9 149 aaKnown RBP10.58□□□□□ -0.72
HMGN1-211ENST00000471260 IFI27L2Q9H2X8 130 aa10.58□□□□□ -0.72
HMGN1-211ENST00000471260 KIAA1456Q9P272 454 aa10.58□□□□□ -0.72
HMGN1-211ENST00000471260 NBR2O15453 112 aa10.57□□□□□ -0.72
HMGN1-211ENST00000471260 NDUFA3O95167 84 aa10.57□□□□□ -0.72
HMGN1-211ENST00000471260 RPLP1P05386 114 aaKnown RBP10.57□□□□□ -0.72
HMGN1-211ENST00000471260 VAMP1P23763 118 aa10.57□□□□□ -0.72
HMGN1-211ENST00000471260 DTYMKP23919 212 aa10.57□□□□□ -0.72
HMGN1-211ENST00000471260 PSMB8P28062 276 aa10.57□□□□□ -0.72
HMGN1-211ENST00000471260 TMEM50BP56557 158 aa10.57□□□□□ -0.72
HMGN1-211ENST00000471260 ARFRP1Q13795 201 aa10.57□□□□□ -0.72
HMGN1-211ENST00000471260 PLAC9Q5JTB6 97 aa10.57□□□□□ -0.72
HMGN1-211ENST00000471260 C18orf65Q6ZTR6 163 aa10.57□□□□□ -0.72
HMGN1-211ENST00000471260 C5orf24Q7Z6I8 188 aa10.57□□□□□ -0.72
HMGN1-211ENST00000471260 GVQW1Q8N7I0 195 aa10.57□□□□□ -0.72
HMGN1-211ENST00000471260 RNF5Q99942 180 aa10.57□□□□□ -0.72
HMGN1-211ENST00000471260 AGMATQ9BSE5 352 aa10.57□□□□□ -0.72
HMGN1-211ENST00000471260 C12orf4Q9NQ89 552 aa10.57□□□□□ -0.72
HMGN1-211ENST00000471260 AK3Q9UIJ7 227 aa10.57□□□□□ -0.72
HMGN1-211ENST00000471260 LOC105371267A0A1B0GV96 52 aa10.56□□□□□ -0.72
HMGN1-211ENST00000471260 TAAR5O14804 337 aa10.56□□□□□ -0.72
HMGN1-211ENST00000471260 ST8SIA5O15466 376 aa10.56□□□□□ -0.72
HMGN1-211ENST00000471260 PPIFP30405 207 aaKnown RBP10.56□□□□□ -0.72
HMGN1-211ENST00000471260 HLA-DRB3P79483 266 aa10.56□□□□□ -0.72
HMGN1-211ENST00000471260 C5orf64Q2M2E5 130 aa10.56□□□□□ -0.72
HMGN1-211ENST00000471260 PRSS54Q6PEW0 395 aa10.56□□□□□ -0.72
HMGN1-211ENST00000471260 OR5AP2Q8NGF4 316 aa10.56□□□□□ -0.72
HMGN1-211ENST00000471260 MARCH1Q8TCQ1 289 aa10.56□□□□□ -0.72
HMGN1-211ENST00000471260 C4orf3Q8WVX3 66 aa10.56□□□□□ -0.72
HMGN1-211ENST00000471260 RAX2Q96IS3 184 aa10.56□□□□□ -0.72
HMGN1-211ENST00000471260 LINC00052Q96N35 136 aa10.56□□□□□ -0.72
HMGN1-211ENST00000471260 AQP10Q96PS8 301 aa10.56□□□□□ -0.72
HMGN1-211ENST00000471260 ZNF471Q9BX82 626 aaPredicted RBP10.56□□□□□ -0.72
HMGN1-211ENST00000471260 Q9N2K0 584 aa10.56□□□□□ -0.72
HMGN1-211ENST00000471260 MBD2Q9UBB5 411 aa10.56□□□□□ -0.72
HMGN1-211ENST00000471260 C14orf166Q9Y224 244 aaKnown RBP10.56□□□□□ -0.72
HMGN1-211ENST00000471260 IGHV7-81A0A0B4J1V7 117 aa10.55□□□□□ -0.72
HMGN1-211ENST00000471260 K7EIL1 84 aa10.55□□□□□ -0.72
HMGN1-211ENST00000471260 HSPA12AO43301 675 aa10.55□□□□□ -0.72
HMGN1-211ENST00000471260 PMP2P02689 132 aa10.55□□□□□ -0.72
HMGN1-211ENST00000471260 CT45A6P0DMU7 189 aa10.55□□□□□ -0.72
HMGN1-211ENST00000471260 CT45A5P0DMU8 189 aa10.55□□□□□ -0.72
HMGN1-211ENST00000471260 CT45A7P0DMV0 189 aa10.55□□□□□ -0.72
HMGN1-211ENST00000471260 CEACAM6P40199 344 aa10.55□□□□□ -0.72
HMGN1-211ENST00000471260 LUMP51884 338 aaPredicted RBP10.55□□□□□ -0.72
HMGN1-211ENST00000471260 KRTAP10-11P60412 298 aa10.55□□□□□ -0.72
HMGN1-211ENST00000471260 EIF5AL1Q6IS14 154 aaKnown RBP10.55□□□□□ -0.72
HMGN1-211ENST00000471260 OR5AN1Q8NGI8 311 aa10.55□□□□□ -0.72
HMGN1-211ENST00000471260 MYOZ3Q8TDC0 251 aa10.55□□□□□ -0.72
HMGN1-211ENST00000471260 TMEM230Q96A57 120 aa10.55□□□□□ -0.72
HMGN1-211ENST00000471260 ARHGAP5-AS1Q96IT6 56 aa10.55□□□□□ -0.72
HMGN1-211ENST00000471260 RITA1Q96K30 269 aa10.55□□□□□ -0.72
HMGN1-211ENST00000471260 UBE2E2Q96LR5 201 aa10.55□□□□□ -0.72
HMGN1-211ENST00000471260 CMSS1Q9BQ75 279 aaKnown RBP10.55□□□□□ -0.72
HMGN1-211ENST00000471260 PECRQ9BY49 303 aa10.55□□□□□ -0.72
HMGN1-211ENST00000471260 C5orf66Q9H5L9 145 aa10.55□□□□□ -0.72
HMGN1-211ENST00000471260 C5orf51A6NDU8 294 aa10.54□□□□□ -0.72
HMGN1-211ENST00000471260 RAMP3O60896 148 aa10.54□□□□□ -0.72
HMGN1-211ENST00000471260 DIRAS3O95661 229 aa10.54□□□□□ -0.72
HMGN1-211ENST00000471260 IGLV1-40P01703 118 aa10.54□□□□□ -0.72
HMGN1-211ENST00000471260 CTSDP07339 412 aaPredicted RBP10.54□□□□□ -0.72
HMGN1-211ENST00000471260 SCTP09683 121 aa10.54□□□□□ -0.72
HMGN1-211ENST00000471260 AKR1C4P17516 323 aa10.54□□□□□ -0.72
HMGN1-211ENST00000471260 HOXD3P31249 432 aaPredicted RBP10.54□□□□□ -0.72
HMGN1-211ENST00000471260 CRIP2P52943 208 aaPredicted RBP10.54□□□□□ -0.72
HMGN1-211ENST00000471260 LCNL1Q6ZST4 164 aa10.54□□□□□ -0.72
HMGN1-211ENST00000471260 TCTEX1D1Q8N7M0 179 aa10.54□□□□□ -0.72
HMGN1-211ENST00000471260 ADAD2Q8NCV1 583 aaKnown RBP10.54□□□□□ -0.72
HMGN1-211ENST00000471260 CASTOR1Q8WTX7 329 aa10.54□□□□□ -0.72
HMGN1-211ENST00000471260 PCNPQ8WW12 178 aaKnown RBP10.54□□□□□ -0.72
HMGN1-211ENST00000471260 C2orf50Q96LR7 162 aa10.54□□□□□ -0.72
HMGN1-211ENST00000471260 HDHD3Q9BSH5 251 aaPredicted RBP10.54□□□□□ -0.72
HMGN1-211ENST00000471260 TOLLIPQ9H0E2 274 aa10.54□□□□□ -0.72
HMGN1-211ENST00000471260 ZNF230Q9UIE0 474 aaPredicted RBP10.54□□□□□ -0.72
HMGN1-211ENST00000471260 WASHC3Q9Y3C0 194 aa10.54□□□□□ -0.72
HMGN1-211ENST00000471260 TRAV41A0A0B4J266 112 aa10.53□□□□□ -0.72
HMGN1-211ENST00000471260 MPTX1A8MV57 137 aa10.53□□□□□ -0.72
HMGN1-211ENST00000471260 TRDCB7Z8K6 153 aa10.53□□□□□ -0.72
HMGN1-211ENST00000471260 H0YJW9 148 aa10.53□□□□□ -0.72
HMGN1-211ENST00000471260 CCSO14618 274 aa10.53□□□□□ -0.72
HMGN1-211ENST00000471260 RRHO14718 337 aa10.53□□□□□ -0.72
HMGN1-211ENST00000471260 ATP6V0E1O15342 81 aa10.53□□□□□ -0.72
HMGN1-211ENST00000471260 CNTFRP26992 372 aa10.53□□□□□ -0.72
HMGN1-211ENST00000471260 RUNX1Q01196 453 aa10.53□□□□□ -0.72
HMGN1-211ENST00000471260 TMEM267Q0VDI3 215 aaPredicted RBP10.53□□□□□ -0.72
HMGN1-211ENST00000471260 FHL3Q13643 280 aa10.53□□□□□ -0.72
HMGN1-211ENST00000471260 RPL39P5Q59GN2 51 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms