RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 A0A0D9SG52 128 aa10.18□□□□□ -0.78
TRAF4-208ENST00000469529 TEX50A0A1B0GTY4 177 aa10.18□□□□□ -0.78
TRAF4-208ENST00000469529 GPR137BO60478 399 aa10.18□□□□□ -0.78
TRAF4-208ENST00000469529 TSC22D2O75157 780 aa10.18□□□□□ -0.78
TRAF4-208ENST00000469529 OR2F2O95006 317 aa10.18□□□□□ -0.78
TRAF4-208ENST00000469529 EIF2B2P49770 351 aaKnown RBP10.18□□□□□ -0.78
TRAF4-208ENST00000469529 F2RL1P55085 397 aa10.18□□□□□ -0.78
TRAF4-208ENST00000469529 POLR2GP62487 172 aaKnown RBP eCLIP10.18□□□□□ -0.78
TRAF4-208ENST00000469529 OR2F1Q13607 317 aa10.18□□□□□ -0.78
TRAF4-208ENST00000469529 LRRC75BQ2VPJ9 315 aa10.18□□□□□ -0.78
TRAF4-208ENST00000469529 LGALSLQ3ZCW2 172 aaPredicted RBP10.18□□□□□ -0.78
TRAF4-208ENST00000469529 RUSC1-AS1Q66K80 236 aa10.18□□□□□ -0.78
TRAF4-208ENST00000469529 LAMTOR1Q6IAA8 161 aa10.18□□□□□ -0.78
TRAF4-208ENST00000469529 SRSF8Q9BRL6 282 aaKnown RBP10.18□□□□□ -0.78
TRAF4-208ENST00000469529 QTRT1Q9BXR0 403 aaKnown RBP10.18□□□□□ -0.78
TRAF4-208ENST00000469529 NDUFA4L2Q9NRX3 87 aa10.18□□□□□ -0.78
TRAF4-208ENST00000469529 OR5AC2Q9NZP5 309 aa10.18□□□□□ -0.78
TRAF4-208ENST00000469529 MBD2Q9UBB5 411 aa10.18□□□□□ -0.78
TRAF4-208ENST00000469529 NIPBLQ6KC79 2804 aaeCLIP10.17□□□□□ -0.78
TRAF4-208ENST00000469529 WRBO00258 174 aa10.17□□□□□ -0.78
TRAF4-208ENST00000469529 SLC25A17O43808 307 aa10.17□□□□□ -0.78
TRAF4-208ENST00000469529 TMEM50AO95807 157 aa10.17□□□□□ -0.78
TRAF4-208ENST00000469529 VDAC2P45880 294 aaPredicted RBP10.17□□□□□ -0.78
TRAF4-208ENST00000469529 PRCDQ00LT1 54 aa10.17□□□□□ -0.78
TRAF4-208ENST00000469529 C5orf64Q2M2E5 130 aa10.17□□□□□ -0.78
TRAF4-208ENST00000469529 LRRC37A5PQ49AS3 106 aa10.17□□□□□ -0.78
TRAF4-208ENST00000469529 C16orf82Q7Z2V1 217 aa10.17□□□□□ -0.78
TRAF4-208ENST00000469529 HSD17B13Q7Z5P4 300 aaPredicted RBP10.17□□□□□ -0.78
TRAF4-208ENST00000469529 C9orf62Q8N4C0 152 aa10.17□□□□□ -0.78
TRAF4-208ENST00000469529 INO80EQ8NBZ0 244 aaPredicted RBP10.17□□□□□ -0.78
TRAF4-208ENST00000469529 OR1L8Q8NGR8 309 aa10.17□□□□□ -0.78
TRAF4-208ENST00000469529 COMMD5Q9GZQ3 224 aa10.17□□□□□ -0.78
TRAF4-208ENST00000469529 RBKSQ9H477 322 aa10.17□□□□□ -0.78
TRAF4-208ENST00000469529 ZNF430Q9H8G1 570 aaPredicted RBP10.17□□□□□ -0.78
TRAF4-208ENST00000469529 LYRM2Q9NU23 88 aaPredicted RBP10.17□□□□□ -0.78
TRAF4-208ENST00000469529 METTL1Q9UBP6 276 aaKnown RBP10.17□□□□□ -0.78
TRAF4-208ENST00000469529 TCF19Q9Y242 345 aa10.17□□□□□ -0.78
TRAF4-208ENST00000469529 OR51B2Q9Y5P1 312 aa10.17□□□□□ -0.78
TRAF4-208ENST00000469529 CR1P17927 2039 aa10.17□□□□□ -0.78
TRAF4-208ENST00000469529 CSPG4Q6UVK1 2322 aa10.17□□□□□ -0.78
TRAF4-208ENST00000469529 ABCA1O95477 2261 aa10.17□□□□□ -0.78
TRAF4-208ENST00000469529 NAV3Q8IVL0 2385 aa10.16□□□□□ -0.78
TRAF4-208ENST00000469529 ZFHX3Q15911 3703 aa10.16□□□□□ -0.78
TRAF4-208ENST00000469529 IGHV3OR16-10A0A075B7F0 116 aa10.16□□□□□ -0.78
TRAF4-208ENST00000469529 RNF222A6NCQ9 220 aa10.16□□□□□ -0.78
TRAF4-208ENST00000469529 A6NDX4 124 aa10.16□□□□□ -0.78
TRAF4-208ENST00000469529 FGF16O43320 207 aa10.16□□□□□ -0.78
TRAF4-208ENST00000469529 RBMXL2O75526 392 aaKnown RBP10.16□□□□□ -0.78
TRAF4-208ENST00000469529 SCAF4O95104 1147 aaKnown RBP10.16□□□□□ -0.78
TRAF4-208ENST00000469529 IFNA17P01571 189 aa10.16□□□□□ -0.78
TRAF4-208ENST00000469529 HKR1P10072 659 aa10.16□□□□□ -0.78
TRAF4-208ENST00000469529 TMEM11P17152 192 aa10.16□□□□□ -0.78
TRAF4-208ENST00000469529 C4BPBP20851 252 aa10.16□□□□□ -0.78
TRAF4-208ENST00000469529 OR2B8PP59922 312 aa10.16□□□□□ -0.78
TRAF4-208ENST00000469529 S100A10P60903 97 aa10.16□□□□□ -0.78
TRAF4-208ENST00000469529 RPL23AP62750 156 aaKnown RBP10.16□□□□□ -0.78
TRAF4-208ENST00000469529 MMDQ15546 238 aa10.16□□□□□ -0.78
TRAF4-208ENST00000469529 FAM120AOSQ5T036 256 aa10.16□□□□□ -0.78
TRAF4-208ENST00000469529 ZNF562Q6V9R5 426 aa10.16□□□□□ -0.78
TRAF4-208ENST00000469529 KCNRGQ8N5I3 272 aa10.16□□□□□ -0.78
TRAF4-208ENST00000469529 OR2C3Q8N628 320 aa10.16□□□□□ -0.78
TRAF4-208ENST00000469529 OR5R1Q8NH85 324 aa10.16□□□□□ -0.78
TRAF4-208ENST00000469529 RBM14Q96PK6 669 aaKnown RBP10.16□□□□□ -0.78
TRAF4-208ENST00000469529 SSX3Q99909 188 aa10.16□□□□□ -0.78
TRAF4-208ENST00000469529 MFFQ9GZY8 342 aa10.16□□□□□ -0.78
TRAF4-208ENST00000469529 SLC25A31Q9H0C2 315 aa10.16□□□□□ -0.78
TRAF4-208ENST00000469529 KIAA1456Q9P272 454 aa10.16□□□□□ -0.78
TRAF4-208ENST00000469529 PITPNC1Q9UKF7 332 aa10.16□□□□□ -0.78
TRAF4-208ENST00000469529 LSM5Q9Y4Y9 91 aaKnown RBP10.16□□□□□ -0.78
TRAF4-208ENST00000469529 U3KQ87 197 aa10.16□□□□□ -0.78
TRAF4-208ENST00000469529 FN1P02751 2386 aaKnown RBP10.15□□□□□ -0.78
TRAF4-208ENST00000469529 FXYD6-FXYD2A0A087WZ82 144 aa10.15□□□□□ -0.78
TRAF4-208ENST00000469529 L7N2F9 121 aa10.15□□□□□ -0.78
TRAF4-208ENST00000469529 M0QZK8 103 aa10.15□□□□□ -0.78
TRAF4-208ENST00000469529 SCGB1D2O95969 90 aa10.15□□□□□ -0.78
TRAF4-208ENST00000469529 HLA-DRB1P01911 266 aa10.15□□□□□ -0.78
TRAF4-208ENST00000469529 CXCL2P19875 107 aa10.15□□□□□ -0.78
TRAF4-208ENST00000469529 CNTFRP26992 372 aa10.15□□□□□ -0.78
TRAF4-208ENST00000469529 RPL12P30050 165 aaKnown RBP10.15□□□□□ -0.78
TRAF4-208ENST00000469529 NUP62P37198 522 aaPredicted RBP10.15□□□□□ -0.78
TRAF4-208ENST00000469529 IER3P46695 156 aa10.15□□□□□ -0.78
TRAF4-208ENST00000469529 COMPP49747 757 aaPredicted RBP10.15□□□□□ -0.78
TRAF4-208ENST00000469529 VAMP2P63027 116 aa10.15□□□□□ -0.78
TRAF4-208ENST00000469529 RPP30P78346 268 aaKnown RBP10.15□□□□□ -0.78
TRAF4-208ENST00000469529 HES1Q14469 280 aa10.15□□□□□ -0.78
TRAF4-208ENST00000469529 HNF4GQ14541 408 aa10.15□□□□□ -0.78
TRAF4-208ENST00000469529 BSXQ3C1V8 233 aa10.15□□□□□ -0.78
TRAF4-208ENST00000469529 Q6YL49 198 aa10.15□□□□□ -0.78
TRAF4-208ENST00000469529 STPG2Q8N412 459 aa10.15□□□□□ -0.78
TRAF4-208ENST00000469529 TMEM252Q8N6L7 170 aa10.15□□□□□ -0.78
TRAF4-208ENST00000469529 Q8N9W7 124 aa10.15□□□□□ -0.78
TRAF4-208ENST00000469529 DTD1Q8TEA8 209 aa10.15□□□□□ -0.78
TRAF4-208ENST00000469529 DCUN1D4Q92564 292 aa10.15□□□□□ -0.78
TRAF4-208ENST00000469529 MAGT1Q9H0U3 335 aa10.15□□□□□ -0.78
TRAF4-208ENST00000469529 HIPK2Q9H2X6 1198 aa10.15□□□□□ -0.78
TRAF4-208ENST00000469529 FBXL15Q9H469 300 aa10.15□□□□□ -0.78
TRAF4-208ENST00000469529 HIVEP2P31629 2446 aa10.14□□□□□ -0.79
TRAF4-208ENST00000469529 A0A1W2PN81 502 aa10.14□□□□□ -0.79
TRAF4-208ENST00000469529 CEBPZOSA8MTT3 80 aa10.14□□□□□ -0.79
TRAF4-208ENST00000469529 INAFM1C9JVW0 142 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms