RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 CCDC71LQ8N9Z2 235 aa11.16□□□□□ -0.62
HMGXB4-206ENST00000466438 LINC00574Q9H8X3 128 aa11.16□□□□□ -0.62
HMGXB4-206ENST00000466438 CALYQ9NYX4 217 aa11.16□□□□□ -0.62
HMGXB4-206ENST00000466438 SIGLEC8Q9NYZ4 499 aa11.16□□□□□ -0.62
HMGXB4-206ENST00000466438 IDI2-AS1Q9NZ38 188 aa11.16□□□□□ -0.62
HMGXB4-206ENST00000466438 JPT1Q9UK76 154 aa11.16□□□□□ -0.62
HMGXB4-206ENST00000466438 GPR132Q9UNW8 380 aa11.16□□□□□ -0.62
HMGXB4-206ENST00000466438 OR2W1Q9Y3N9 320 aa11.16□□□□□ -0.62
HMGXB4-206ENST00000466438 A0A0B4J293 547 aa11.15□□□□□ -0.62
HMGXB4-206ENST00000466438 IGKV1-6A0A0C4DH72 117 aa11.15□□□□□ -0.62
HMGXB4-206ENST00000466438 A0A1B0GVY2 172 aa11.15□□□□□ -0.62
HMGXB4-206ENST00000466438 TUSC2O75896 110 aa11.15□□□□□ -0.62
HMGXB4-206ENST00000466438 OR4E1P0C645 316 aa11.15□□□□□ -0.62
HMGXB4-206ENST00000466438 AADACP22760 399 aa11.15□□□□□ -0.62
HMGXB4-206ENST00000466438 CBX3Q13185 183 aa11.15□□□□□ -0.62
HMGXB4-206ENST00000466438 LINC00336Q6ZUF6 198 aa11.15□□□□□ -0.62
HMGXB4-206ENST00000466438 SLC25A42Q86VD7 318 aa11.15□□□□□ -0.62
HMGXB4-206ENST00000466438 CADM3Q8N126 398 aa11.15□□□□□ -0.62
HMGXB4-206ENST00000466438 OR10A7Q8NGE5 316 aa11.15□□□□□ -0.62
HMGXB4-206ENST00000466438 OR1L1Q8NH94 360 aa11.15□□□□□ -0.62
HMGXB4-206ENST00000466438 EDARADDQ8WWZ3 215 aa11.15□□□□□ -0.62
HMGXB4-206ENST00000466438 MRGPRFQ96AM1 343 aa11.15□□□□□ -0.62
HMGXB4-206ENST00000466438 PARP11Q9NR21 331 aa11.15□□□□□ -0.62
HMGXB4-206ENST00000466438 RBM7Q9Y580 266 aaKnown RBP11.15□□□□□ -0.62
HMGXB4-206ENST00000466438 FAT2Q9NYQ8 4349 aa11.15□□□□□ -0.63
HMGXB4-206ENST00000466438 C15orf65H3BRN8 121 aa11.14□□□□□ -0.63
HMGXB4-206ENST00000466438 SSNA1O43805 119 aa11.14□□□□□ -0.63
HMGXB4-206ENST00000466438 HLA-AP01891 365 aaKnown RBP11.14□□□□□ -0.63
HMGXB4-206ENST00000466438 TMEM128Q5BJH2 165 aa11.14□□□□□ -0.63
HMGXB4-206ENST00000466438 CHAC2Q8WUX2 184 aa11.14□□□□□ -0.63
HMGXB4-206ENST00000466438 MED28Q9H204 178 aa11.14□□□□□ -0.63
HMGXB4-206ENST00000466438 OR2S2Q9NQN1 319 aa11.14□□□□□ -0.63
HMGXB4-206ENST00000466438 RDH8Q9NYR8 311 aa11.14□□□□□ -0.63
HMGXB4-206ENST00000466438 OR1A1Q9P1Q5 309 aa11.14□□□□□ -0.63
HMGXB4-206ENST00000466438 GNG12Q9UBI6 72 aa11.14□□□□□ -0.63
HMGXB4-206ENST00000466438 HERC1Q15751 4861 aa11.13□□□□□ -0.63
HMGXB4-206ENST00000466438 A0A1W2PPE3 182 aa11.13□□□□□ -0.63
HMGXB4-206ENST00000466438 SOX15O60248 233 aa11.13□□□□□ -0.63
HMGXB4-206ENST00000466438 SLC22A5O76082 557 aa11.13□□□□□ -0.63
HMGXB4-206ENST00000466438 ANXA3P12429 323 aa11.13□□□□□ -0.63
HMGXB4-206ENST00000466438 AKR1C4P17516 323 aa11.13□□□□□ -0.63
HMGXB4-206ENST00000466438 CEACAM6P40199 344 aa11.13□□□□□ -0.63
HMGXB4-206ENST00000466438 RRAS2P62070 204 aaPredicted RBP11.13□□□□□ -0.63
HMGXB4-206ENST00000466438 LTC4SQ16873 150 aa11.13□□□□□ -0.63
HMGXB4-206ENST00000466438 LYG2Q86SG7 212 aa11.13□□□□□ -0.63
HMGXB4-206ENST00000466438 CMTM1Q8IZ96 169 aa11.13□□□□□ -0.63
HMGXB4-206ENST00000466438 OR10V1Q8NGI7 309 aa11.13□□□□□ -0.63
HMGXB4-206ENST00000466438 ZNF431Q8TF32 576 aaPredicted RBP11.13□□□□□ -0.63
HMGXB4-206ENST00000466438 SECTM1Q8WVN6 248 aa11.13□□□□□ -0.63
HMGXB4-206ENST00000466438 RTN4IP1Q8WWV3 396 aaPredicted RBP11.13□□□□□ -0.63
HMGXB4-206ENST00000466438 SLC5A7Q9GZV3 580 aa11.13□□□□□ -0.63
HMGXB4-206ENST00000466438 C5orf66Q9H5L9 145 aa11.13□□□□□ -0.63
HMGXB4-206ENST00000466438 DYNC1H1Q14204 4646 aaKnown RBP11.13□□□□□ -0.63
HMGXB4-206ENST00000466438 A0A1W2PN81 502 aa11.12□□□□□ -0.63
HMGXB4-206ENST00000466438 HMX3A6NHT5 357 aa11.12□□□□□ -0.63
HMGXB4-206ENST00000466438 GPR31O00270 319 aa11.12□□□□□ -0.63
HMGXB4-206ENST00000466438 YPEL1O60688 119 aa11.12□□□□□ -0.63
HMGXB4-206ENST00000466438 IGHV3-11P01762 117 aa11.12□□□□□ -0.63
HMGXB4-206ENST00000466438 VAMP1P23763 118 aa11.12□□□□□ -0.63
HMGXB4-206ENST00000466438 CHRNA7P36544 502 aa11.12□□□□□ -0.63
HMGXB4-206ENST00000466438 CD81P60033 236 aa11.12□□□□□ -0.63
HMGXB4-206ENST00000466438 EWSR1Q01844 656 aaKnown RBP eCLIP11.12□□□□□ -0.63
HMGXB4-206ENST00000466438 MSMO1Q15800 293 aa11.12□□□□□ -0.63
HMGXB4-206ENST00000466438 IL34Q6ZMJ4 242 aa11.12□□□□□ -0.63
HMGXB4-206ENST00000466438 AKAP14Q86UN6 197 aa11.12□□□□□ -0.63
HMGXB4-206ENST00000466438 OR52M1Q8NGK5 317 aa11.12□□□□□ -0.63
HMGXB4-206ENST00000466438 UBALD1Q8TB05 177 aa11.12□□□□□ -0.63
HMGXB4-206ENST00000466438 YPEL2Q96QA6 119 aa11.12□□□□□ -0.63
HMGXB4-206ENST00000466438 SEC22CQ9BRL7 303 aa11.12□□□□□ -0.63
HMGXB4-206ENST00000466438 OVOL2Q9BRP0 275 aa11.12□□□□□ -0.63
HMGXB4-206ENST00000466438 SLC2A9Q9NRM0 540 aa11.12□□□□□ -0.63
HMGXB4-206ENST00000466438 DNAH2Q9P225 4427 aa11.12□□□□□ -0.63
HMGXB4-206ENST00000466438 DNAH11Q96DT5 4516 aa11.11□□□□□ -0.63
HMGXB4-206ENST00000466438 IGHV7-81A0A0B4J1V7 117 aa11.11□□□□□ -0.63
HMGXB4-206ENST00000466438 A0A0J9YWU9 116 aa11.11□□□□□ -0.63
HMGXB4-206ENST00000466438 TEX13DA0A0J9YY54 714 aaPredicted RBP11.11□□□□□ -0.63
HMGXB4-206ENST00000466438 HLA-DRB1P01911 266 aa11.11□□□□□ -0.63
HMGXB4-206ENST00000466438 ZP3P21754 424 aa11.11□□□□□ -0.63
HMGXB4-206ENST00000466438 PIGPP57054 158 aa11.11□□□□□ -0.63
HMGXB4-206ENST00000466438 RND3P61587 244 aa11.11□□□□□ -0.63
HMGXB4-206ENST00000466438 DHODHQ02127 395 aa11.11□□□□□ -0.63
HMGXB4-206ENST00000466438 DHRS2Q13268 280 aa11.11□□□□□ -0.63
HMGXB4-206ENST00000466438 PPP1R1AQ13522 171 aa11.11□□□□□ -0.63
HMGXB4-206ENST00000466438 MMDQ15546 238 aa11.11□□□□□ -0.63
HMGXB4-206ENST00000466438 C19orf54Q5BKX5 351 aa11.11□□□□□ -0.63
HMGXB4-206ENST00000466438 ZBTB34Q8NCN2 500 aa11.11□□□□□ -0.63
HMGXB4-206ENST00000466438 ADAD2Q8NCV1 583 aaKnown RBP11.11□□□□□ -0.63
HMGXB4-206ENST00000466438 OR2AK2Q8NG84 335 aa11.11□□□□□ -0.63
HMGXB4-206ENST00000466438 OR52L2PQ8NGH6 319 aa11.11□□□□□ -0.63
HMGXB4-206ENST00000466438 OR9G4Q8NGQ1 327 aa11.11□□□□□ -0.63
HMGXB4-206ENST00000466438 RFESDQ8TAC1 157 aa11.11□□□□□ -0.63
HMGXB4-206ENST00000466438 CASTOR1Q8WTX7 329 aa11.11□□□□□ -0.63
HMGXB4-206ENST00000466438 PPP1R14BQ96C90 147 aa11.11□□□□□ -0.63
HMGXB4-206ENST00000466438 PHB2Q99623 299 aa11.11□□□□□ -0.63
HMGXB4-206ENST00000466438 NEURL2Q9BR09 285 aa11.11□□□□□ -0.63
HMGXB4-206ENST00000466438 RTBDNQ9BSG5 229 aaPredicted RBP11.11□□□□□ -0.63
HMGXB4-206ENST00000466438 SRD5A3Q9H8P0 318 aa11.11□□□□□ -0.63
HMGXB4-206ENST00000466438 GFOD1Q9NXC2 390 aa11.11□□□□□ -0.63
HMGXB4-206ENST00000466438 FOXA2Q9Y261 457 aaPredicted RBP11.11□□□□□ -0.63
HMGXB4-206ENST00000466438 KCNIP3Q9Y2W7 256 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms