RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 WDR25Q64LD2 544 aaPredicted RBP11□□□□□ -0.65
UBE4B-206ENST00000466379 TMEM186Q96B77 213 aa11□□□□□ -0.65
UBE4B-206ENST00000466379 UBTD1Q9HAC8 227 aa11□□□□□ -0.65
UBE4B-206ENST00000466379 KIAA1456Q9P272 454 aa11□□□□□ -0.65
UBE4B-206ENST00000466379 TIMM9Q9Y5J7 89 aa11□□□□□ -0.65
UBE4B-206ENST00000466379 IGHV2-26A0A0B4J1V2 119 aa11□□□□□ -0.65
UBE4B-206ENST00000466379 KBTBD11O94819 623 aa11□□□□□ -0.65
UBE4B-206ENST00000466379 SNAPINO95295 136 aa11□□□□□ -0.65
UBE4B-206ENST00000466379 CD1BP29016 333 aa11□□□□□ -0.65
UBE4B-206ENST00000466379 RPP30P78346 268 aaKnown RBP11□□□□□ -0.65
UBE4B-206ENST00000466379 FFAR4Q5NUL3 377 aa11□□□□□ -0.65
UBE4B-206ENST00000466379 ZNF787Q6DD87 383 aa11□□□□□ -0.65
UBE4B-206ENST00000466379 TGIF2LXQ8IUE1 241 aa11□□□□□ -0.65
UBE4B-206ENST00000466379 RPP25LQ8N5L8 163 aaKnown RBP11□□□□□ -0.65
UBE4B-206ENST00000466379 C8orf31Q8N9H6 132 aa11□□□□□ -0.65
UBE4B-206ENST00000466379 CLDND2Q8NHS1 167 aa11□□□□□ -0.65
UBE4B-206ENST00000466379 RXFP4Q8TDU9 374 aa11□□□□□ -0.65
UBE4B-206ENST00000466379 FLYWCH2Q96CP2 140 aaKnown RBP11□□□□□ -0.65
UBE4B-206ENST00000466379 NEIL1Q96FI4 390 aaPredicted RBP11□□□□□ -0.65
UBE4B-206ENST00000466379 RITA1Q96K30 269 aa11□□□□□ -0.65
UBE4B-206ENST00000466379 ENY2Q9NPA8 101 aa11□□□□□ -0.65
UBE4B-206ENST00000466379 GNG13Q9P2W3 67 aa11□□□□□ -0.65
UBE4B-206ENST00000466379 PRNDQ9UKY0 176 aa11□□□□□ -0.65
UBE4B-206ENST00000466379 KPTNQ9Y664 436 aa11□□□□□ -0.65
UBE4B-206ENST00000466379 TEX50A0A1B0GTY4 177 aa10.99□□□□□ -0.65
UBE4B-206ENST00000466379 BTBD17A6NE02 478 aa10.99□□□□□ -0.65
UBE4B-206ENST00000466379 C22orf46C9J442 243 aa10.99□□□□□ -0.65
UBE4B-206ENST00000466379 PRSS46E5RG02 174 aa10.99□□□□□ -0.65
UBE4B-206ENST00000466379 CA2P00918 260 aa10.99□□□□□ -0.65
UBE4B-206ENST00000466379 HBE1P02100 147 aa10.99□□□□□ -0.65
UBE4B-206ENST00000466379 MDKP21741 143 aaPredicted RBP10.99□□□□□ -0.65
UBE4B-206ENST00000466379 CEBPGP53567 150 aa10.99□□□□□ -0.65
UBE4B-206ENST00000466379 ICAM4Q14773 271 aa10.99□□□□□ -0.65
UBE4B-206ENST00000466379 CLRN3Q8NCR9 226 aa10.99□□□□□ -0.65
UBE4B-206ENST00000466379 SLC24A4Q8NFF2 622 aa10.99□□□□□ -0.65
UBE4B-206ENST00000466379 OSR1Q8TAX0 266 aaPredicted RBP10.99□□□□□ -0.65
UBE4B-206ENST00000466379 LHX4Q969G2 390 aa10.99□□□□□ -0.65
UBE4B-206ENST00000466379 SLC35B3Q9H1N7 401 aa10.99□□□□□ -0.65
UBE4B-206ENST00000466379 SLC25A22Q9H936 323 aa10.99□□□□□ -0.65
UBE4B-206ENST00000466379 ONECUT1Q9UBC0 465 aa10.99□□□□□ -0.65
UBE4B-206ENST00000466379 TNCP24821 2201 aa10.99□□□□□ -0.65
UBE4B-206ENST00000466379 ARHGAP32A7KAX9 2087 aa10.99□□□□□ -0.65
UBE4B-206ENST00000466379 A0A1B0GW64 132 aa10.98□□□□□ -0.65
UBE4B-206ENST00000466379 TMEM8BA6NDV4 472 aa10.98□□□□□ -0.65
UBE4B-206ENST00000466379 NPY1RP25929 384 aa10.98□□□□□ -0.65
UBE4B-206ENST00000466379 AKR1C3P42330 323 aa10.98□□□□□ -0.65
UBE4B-206ENST00000466379 TMEM177Q53S58 311 aa10.98□□□□□ -0.65
UBE4B-206ENST00000466379 CENPVQ7Z7K6 275 aaPredicted RBP10.98□□□□□ -0.65
UBE4B-206ENST00000466379 DTX2Q86UW9 622 aa10.98□□□□□ -0.65
UBE4B-206ENST00000466379 Q8N7P7 452 aa10.98□□□□□ -0.65
UBE4B-206ENST00000466379 NEU4Q8WWR8 484 aaPredicted RBP10.98□□□□□ -0.65
UBE4B-206ENST00000466379 RAB1CQ92928 201 aa10.98□□□□□ -0.65
UBE4B-206ENST00000466379 C20orf24Q9BUV8 137 aa10.98□□□□□ -0.65
UBE4B-206ENST00000466379 BET1LQ9NYM9 111 aa10.98□□□□□ -0.65
UBE4B-206ENST00000466379 MIOXQ9UGB7 285 aa10.98□□□□□ -0.65
UBE4B-206ENST00000466379 MAP1LC3B2A6NCE7 125 aa10.98□□□□□ -0.65
UBE4B-206ENST00000466379 ZFP92A6NM28 416 aa10.98□□□□□ -0.65
UBE4B-206ENST00000466379 ENSAO43768 121 aaKnown RBP10.98□□□□□ -0.65
UBE4B-206ENST00000466379 SCAF4O95104 1147 aaKnown RBP10.98□□□□□ -0.65
UBE4B-206ENST00000466379 FSTL3O95633 263 aa10.98□□□□□ -0.65
UBE4B-206ENST00000466379 ZNF709Q8N972 641 aa10.98□□□□□ -0.65
UBE4B-206ENST00000466379 OR10W1Q8NGF6 305 aa10.98□□□□□ -0.65
UBE4B-206ENST00000466379 MBD3L1Q8WWY6 194 aa10.98□□□□□ -0.65
UBE4B-206ENST00000466379 TIMD4Q96H15 378 aa10.98□□□□□ -0.65
UBE4B-206ENST00000466379 MAP1LC3BQ9GZQ8 125 aa10.98□□□□□ -0.65
UBE4B-206ENST00000466379 PLEKHA3Q9HB20 300 aa10.98□□□□□ -0.65
UBE4B-206ENST00000466379 WDR83OSQ9Y284 106 aa10.98□□□□□ -0.65
UBE4B-206ENST00000466379 LY86O95711 162 aa10.97□□□□□ -0.65
UBE4B-206ENST00000466379 ZNF137PP52743 207 aa10.97□□□□□ -0.65
UBE4B-206ENST00000466379 RAB11AP62491 216 aa10.97□□□□□ -0.65
UBE4B-206ENST00000466379 PRCDQ00LT1 54 aa10.97□□□□□ -0.65
UBE4B-206ENST00000466379 FAM71F2Q6NXP2 309 aa10.97□□□□□ -0.65
UBE4B-206ENST00000466379 FAM122CQ6P4D5 195 aa10.97□□□□□ -0.65
UBE4B-206ENST00000466379 TREML4Q6UXN2 200 aa10.97□□□□□ -0.65
UBE4B-206ENST00000466379 PDPNQ86YL7 162 aa10.97□□□□□ -0.65
UBE4B-206ENST00000466379 OR10G4Q8NGN3 311 aa10.97□□□□□ -0.65
UBE4B-206ENST00000466379 OR10G9Q8NGN4 311 aa10.97□□□□□ -0.65
UBE4B-206ENST00000466379 OR10G7Q8NGN6 311 aa10.97□□□□□ -0.65
UBE4B-206ENST00000466379 WASHC3Q9Y3C0 194 aa10.97□□□□□ -0.65
UBE4B-206ENST00000466379 TRAV1-1A0A0B4J248 108 aa10.97□□□□□ -0.65
UBE4B-206ENST00000466379 E7EUB6 86 aa10.97□□□□□ -0.65
UBE4B-206ENST00000466379 SRP19P09132 144 aaKnown RBP10.97□□□□□ -0.65
UBE4B-206ENST00000466379 HLA-DRB5Q30154 266 aa10.97□□□□□ -0.65
UBE4B-206ENST00000466379 GCSAMLQ5JQS6 135 aa10.97□□□□□ -0.65
UBE4B-206ENST00000466379 OR4C13Q8NGP0 309 aa10.97□□□□□ -0.65
UBE4B-206ENST00000466379 FAM122AQ96E09 287 aa10.97□□□□□ -0.65
UBE4B-206ENST00000466379 TPSG1Q9NRR2 321 aa10.97□□□□□ -0.65
UBE4B-206ENST00000466379 TACC2O95359 2948 aa10.96□□□□□ -0.65
UBE4B-206ENST00000466379 LOC102723971A0A1B0GUV8 181 aa10.96□□□□□ -0.65
UBE4B-206ENST00000466379 IGLV1-47P01700 117 aa10.96□□□□□ -0.65
UBE4B-206ENST00000466379 IGLV2-23P01705 113 aa10.96□□□□□ -0.65
UBE4B-206ENST00000466379 ARSJQ5FYB0 599 aaPredicted RBP10.96□□□□□ -0.65
UBE4B-206ENST00000466379 ZNF506Q5JVG8 444 aa10.96□□□□□ -0.65
UBE4B-206ENST00000466379 C10orf55Q5SWW7 151 aa10.96□□□□□ -0.65
UBE4B-206ENST00000466379 PNKDQ8N490 385 aa10.96□□□□□ -0.65
UBE4B-206ENST00000466379 CLEC7AQ9BXN2 247 aa10.96□□□□□ -0.65
UBE4B-206ENST00000466379 TMPRSS5Q9H3S3 457 aa10.96□□□□□ -0.65
UBE4B-206ENST00000466379 SIRT7Q9NRC8 400 aa10.96□□□□□ -0.65
UBE4B-206ENST00000466379 SLC39A9Q9NUM3 307 aa10.96□□□□□ -0.65
UBE4B-206ENST00000466379 ZNF257Q9Y2Q1 563 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms