RNA–Protein interactions for RNA: ENST00000465903.5

SMC4-206, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-206ENST00000465903 DNAH3Q8TD57 4116 aa20.02■□□□□ 0.8
SMC4-206ENST00000465903 MARCH11A6NNE9 402 aa20.02■□□□□ 0.8
SMC4-206ENST00000465903 MPPED1O15442 326 aa20.02■□□□□ 0.8
SMC4-206ENST00000465903 PTBP1P26599 531 aaKnown RBP eCLIP20.02■□□□□ 0.8
SMC4-206ENST00000465903 S100A5P33763 92 aa20.02■□□□□ 0.8
SMC4-206ENST00000465903 G6PCP35575 357 aa20.02■□□□□ 0.8
SMC4-206ENST00000465903 RAB25P57735 213 aa20.02■□□□□ 0.8
SMC4-206ENST00000465903 MARCH1Q8TCQ1 289 aa20.02■□□□□ 0.8
SMC4-206ENST00000465903 FYTTD1Q96QD9 318 aaKnown RBP20.02■□□□□ 0.8
SMC4-206ENST00000465903 THAP7Q9BT49 309 aaPredicted RBP20.02■□□□□ 0.8
SMC4-206ENST00000465903 NDUFA13Q9P0J0 144 aa20.02■□□□□ 0.8
SMC4-206ENST00000465903 DISC1C4P0D8 188 aa20.01■□□□□ 0.79
SMC4-206ENST00000465903 DUS4LO95620 317 aaKnown RBP20.01■□□□□ 0.79
SMC4-206ENST00000465903 KRASP01116 189 aa20.01■□□□□ 0.79
SMC4-206ENST00000465903 IGKV1-39P01597 117 aa20.01■□□□□ 0.79
SMC4-206ENST00000465903 IGKV1D-39P04432 117 aa20.01■□□□□ 0.79
SMC4-206ENST00000465903 PIGPP57054 158 aa20.01■□□□□ 0.79
SMC4-206ENST00000465903 DEFA5Q01523 94 aa20.01■□□□□ 0.79
SMC4-206ENST00000465903 ZNF616Q08AN1 781 aa20.01■□□□□ 0.79
SMC4-206ENST00000465903 CADM3Q8N126 398 aa20.01■□□□□ 0.79
SMC4-206ENST00000465903 OR13C8Q8NGS7 320 aa20.01■□□□□ 0.79
SMC4-206ENST00000465903 ZFAND1Q8TCF1 268 aa20.01■□□□□ 0.79
SMC4-206ENST00000465903 IGHV4OR15-8A0A075B7B6 117 aa20■□□□□ 0.79
SMC4-206ENST00000465903 A0A087WW49 117 aa20■□□□□ 0.79
SMC4-206ENST00000465903 WIPF1O43516 503 aa20■□□□□ 0.79
SMC4-206ENST00000465903 PRH1P02810 166 aa20■□□□□ 0.79
SMC4-206ENST00000465903 OR2B8PP59922 312 aa20■□□□□ 0.79
SMC4-206ENST00000465903 ERVK-16P61578 105 aa20■□□□□ 0.79
SMC4-206ENST00000465903 ZNF45Q02386 682 aa20■□□□□ 0.79
SMC4-206ENST00000465903 OR6Q1Q8NGQ2 317 aa20■□□□□ 0.79
SMC4-206ENST00000465903 CTSDP07339 412 aaPredicted RBP19.99■□□□□ 0.79
SMC4-206ENST00000465903 FGF2P09038 288 aa19.99■□□□□ 0.79
SMC4-206ENST00000465903 AREGP15514 252 aa19.99■□□□□ 0.79
SMC4-206ENST00000465903 PYDC2Q56P42 97 aa19.99■□□□□ 0.79
SMC4-206ENST00000465903 DPF1Q92782 380 aa19.99■□□□□ 0.79
SMC4-206ENST00000465903 TRIM63Q969Q1 353 aa19.99■□□□□ 0.79
SMC4-206ENST00000465903 RTBDNQ9BSG5 229 aaPredicted RBP19.99■□□□□ 0.79
SMC4-206ENST00000465903 MCRIP2Q9BUT9 160 aaKnown RBP19.99■□□□□ 0.79
SMC4-206ENST00000465903 TRBV9A0A0B4J1U6 114 aa19.98■□□□□ 0.79
SMC4-206ENST00000465903 A0A0G2JLM5 398 aa19.98■□□□□ 0.79
SMC4-206ENST00000465903 C13orf42A0A1B0GVH6 325 aa19.98■□□□□ 0.79
SMC4-206ENST00000465903 NPIPB5A8MRT5 1133 aa19.98■□□□□ 0.79
SMC4-206ENST00000465903 LINC01619G3V211 115 aa19.98■□□□□ 0.79
SMC4-206ENST00000465903 PRB2P02812 416 aaPredicted RBP19.98■□□□□ 0.79
SMC4-206ENST00000465903 HSPB1P04792 205 aaKnown RBP19.98■□□□□ 0.79
SMC4-206ENST00000465903 OR8U8P0C7N1 319 aa19.98■□□□□ 0.79
SMC4-206ENST00000465903 ETV6P41212 452 aa19.98■□□□□ 0.79
SMC4-206ENST00000465903 C19orf35Q6ZS72 473 aa19.98■□□□□ 0.79
SMC4-206ENST00000465903 OR51S1Q8NGJ8 323 aa19.98■□□□□ 0.79
SMC4-206ENST00000465903 SEC22AQ96IW7 307 aa19.98■□□□□ 0.79
SMC4-206ENST00000465903 TP53RKQ96S44 253 aa19.98■□□□□ 0.79
SMC4-206ENST00000465903 GPR132Q9UNW8 380 aa19.98■□□□□ 0.79
SMC4-206ENST00000465903 ZNF257Q9Y2Q1 563 aa19.98■□□□□ 0.79
SMC4-206ENST00000465903 CRYGCP07315 174 aa19.97■□□□□ 0.79
SMC4-206ENST00000465903 SLURP1P55000 103 aa19.97■□□□□ 0.79
SMC4-206ENST00000465903 SLC25A42Q86VD7 318 aa19.97■□□□□ 0.79
SMC4-206ENST00000465903 DCUN1D4Q92564 292 aa19.97■□□□□ 0.79
SMC4-206ENST00000465903 USMG5Q96IX5 58 aa19.97■□□□□ 0.79
SMC4-206ENST00000465903 AKIP1Q9NQ31 210 aa19.97■□□□□ 0.79
SMC4-206ENST00000465903 SLC2A8Q9NY64 477 aa19.97■□□□□ 0.79
SMC4-206ENST00000465903 NSG2Q9Y328 171 aa19.97■□□□□ 0.79
SMC4-206ENST00000465903 C3orf85A0A1B0GTC6 90 aa19.96■□□□□ 0.79
SMC4-206ENST00000465903 TEX50A0A1B0GTY4 177 aa19.96■□□□□ 0.79
SMC4-206ENST00000465903 H0Y980 276 aa19.96■□□□□ 0.79
SMC4-206ENST00000465903 CTRB1P17538 263 aa19.96■□□□□ 0.79
SMC4-206ENST00000465903 PSMB6P28072 239 aa19.96■□□□□ 0.79
SMC4-206ENST00000465903 ECI1P42126 302 aa19.96■□□□□ 0.79
SMC4-206ENST00000465903 KLF9Q13886 244 aaPredicted RBP19.96■□□□□ 0.79
SMC4-206ENST00000465903 CTRB2Q6GPI1 263 aa19.96■□□□□ 0.79
SMC4-206ENST00000465903 ZNF343Q6P1L6 599 aa19.96■□□□□ 0.79
SMC4-206ENST00000465903 Q8N402 240 aa19.96■□□□□ 0.79
SMC4-206ENST00000465903 DLX4Q92988 240 aaPredicted RBP19.96■□□□□ 0.79
SMC4-206ENST00000465903 PRRT1Q99946 306 aa19.96■□□□□ 0.79
SMC4-206ENST00000465903 COMMD5Q9GZQ3 224 aa19.96■□□□□ 0.79
SMC4-206ENST00000465903 C5orf66Q9H5L9 145 aa19.96■□□□□ 0.79
SMC4-206ENST00000465903 COPZ2Q9P299 210 aa19.96■□□□□ 0.79
SMC4-206ENST00000465903 RHOGP84095 191 aa19.95■□□□□ 0.78
SMC4-206ENST00000465903 SURF2Q15527 256 aaPredicted RBP19.95■□□□□ 0.78
SMC4-206ENST00000465903 KLK9Q2XQG4 91 aa19.95■□□□□ 0.78
SMC4-206ENST00000465903 CCDC71LQ8N9Z2 235 aa19.95■□□□□ 0.78
SMC4-206ENST00000465903 FANCD2OSQ96PS1 177 aa19.95■□□□□ 0.78
SMC4-206ENST00000465903 KLK9Q9UKQ9 250 aa19.95■□□□□ 0.78
SMC4-206ENST00000465903 PRKDCP78527 4128 aaKnown RBP19.95■□□□□ 0.78
SMC4-206ENST00000465903 IGLC7A0M8Q6 106 aa19.94■□□□□ 0.78
SMC4-206ENST00000465903 HOXD3P31249 432 aaPredicted RBP19.94■□□□□ 0.78
SMC4-206ENST00000465903 KRTAP10-11P60412 298 aa19.94■□□□□ 0.78
SMC4-206ENST00000465903 EGFEM1PQ0D2K5 195 aa19.94■□□□□ 0.78
SMC4-206ENST00000465903 SP6Q3SY56 376 aa19.94■□□□□ 0.78
SMC4-206ENST00000465903 PDLIM3Q53GG5 364 aaPredicted RBP19.94■□□□□ 0.78
SMC4-206ENST00000465903 OR10W1Q8NGF6 305 aa19.94■□□□□ 0.78
SMC4-206ENST00000465903 GPR61Q9BZJ8 451 aa19.94■□□□□ 0.78
SMC4-206ENST00000465903 SRRQ9GZT4 340 aa19.94■□□□□ 0.78
SMC4-206ENST00000465903 DBX1A6NMT0 343 aa19.93■□□□□ 0.78
SMC4-206ENST00000465903 OR2J3O76001 311 aa19.93■□□□□ 0.78
SMC4-206ENST00000465903 REG1AP05451 166 aa19.93■□□□□ 0.78
SMC4-206ENST00000465903 SERPINE2P07093 398 aa19.93■□□□□ 0.78
SMC4-206ENST00000465903 GDPD1Q8N9F7 314 aa19.93■□□□□ 0.78
SMC4-206ENST00000465903 QTRT1Q9BXR0 403 aaKnown RBP19.93■□□□□ 0.78
SMC4-206ENST00000465903 RANGRFQ9HD47 186 aaPredicted RBP19.93■□□□□ 0.78
SMC4-206ENST00000465903 C14orf166Q9Y224 244 aaKnown RBP19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms