RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 OR9G1Q8NH87 305 aa4.49□□□□□ -1.69
CSMD3-204ENST00000455883 RNF7Q9UBF6 113 aa4.49□□□□□ -1.69
CSMD3-204ENST00000455883 OOSP1A8MZH6 123 aa4.49□□□□□ -1.69
CSMD3-204ENST00000455883 KLF4O43474 513 aa4.49□□□□□ -1.69
CSMD3-204ENST00000455883 CRPP02741 224 aa4.49□□□□□ -1.69
CSMD3-204ENST00000455883 TMEM11P17152 192 aa4.49□□□□□ -1.69
CSMD3-204ENST00000455883 TMEM252Q8N6L7 170 aa4.49□□□□□ -1.69
CSMD3-204ENST00000455883 MISP3Q96FF7 219 aa4.49□□□□□ -1.69
CSMD3-204ENST00000455883 ABHD17AQ96GS6 310 aa4.49□□□□□ -1.69
CSMD3-204ENST00000455883 COL11A2P13942 1736 aaPredicted RBP4.49□□□□□ -1.69
CSMD3-204ENST00000455883 OR1K1Q8NGR3 316 aa4.49□□□□□ -1.69
CSMD3-204ENST00000455883 MRGPRFQ96AM1 343 aa4.49□□□□□ -1.69
CSMD3-204ENST00000455883 Q96M66 194 aa4.49□□□□□ -1.69
CSMD3-204ENST00000455883 PHF7Q9BWX1 381 aaPredicted RBP4.49□□□□□ -1.69
CSMD3-204ENST00000455883 FCGR3AP08637 254 aa4.49□□□□□ -1.69
CSMD3-204ENST00000455883 IFI27P40305 119 aaPredicted RBP4.49□□□□□ -1.69
CSMD3-204ENST00000455883 SOX8P57073 446 aa4.49□□□□□ -1.69
CSMD3-204ENST00000455883 PVRIGQ6DKI7 326 aa4.49□□□□□ -1.69
CSMD3-204ENST00000455883 RAX2Q96IS3 184 aa4.49□□□□□ -1.69
CSMD3-204ENST00000455883 UMODP07911 640 aa4.49□□□□□ -1.69
CSMD3-204ENST00000455883 SF3B6Q9Y3B4 125 aaKnown RBP4.49□□□□□ -1.69
CSMD3-204ENST00000455883 A0A1B0GWB2 263 aa4.49□□□□□ -1.69
CSMD3-204ENST00000455883 KLKB1P03952 638 aa4.49□□□□□ -1.69
CSMD3-204ENST00000455883 CNTFRP26992 372 aa4.49□□□□□ -1.69
CSMD3-204ENST00000455883 RPL31P62899 125 aaKnown RBP4.49□□□□□ -1.69
CSMD3-204ENST00000455883 PMP22Q01453 160 aa4.49□□□□□ -1.69
CSMD3-204ENST00000455883 LDLRAD3Q86YD5 345 aa4.49□□□□□ -1.69
CSMD3-204ENST00000455883 LINC00470Q9BZP3 86 aa4.49□□□□□ -1.69
CSMD3-204ENST00000455883 DEFB110Q30KQ9 67 aa4.49□□□□□ -1.69
CSMD3-204ENST00000455883 SNAI3Q3KNW1 292 aa4.49□□□□□ -1.69
CSMD3-204ENST00000455883 Q6ZS52 159 aa4.49□□□□□ -1.69
CSMD3-204ENST00000455883 TLNRD1Q9H1K6 362 aa4.49□□□□□ -1.69
CSMD3-204ENST00000455883 EDA2RQ9HAV5 297 aa4.49□□□□□ -1.69
CSMD3-204ENST00000455883 PLSCR3Q9NRY6 295 aa4.49□□□□□ -1.69
CSMD3-204ENST00000455883 NKX2-8O15522 239 aa4.49□□□□□ -1.69
CSMD3-204ENST00000455883 GDF9O60383 454 aa4.49□□□□□ -1.69
CSMD3-204ENST00000455883 DNASE2BQ8WZ79 361 aa4.49□□□□□ -1.69
CSMD3-204ENST00000455883 SDF2L1Q9HCN8 221 aa4.49□□□□□ -1.69
CSMD3-204ENST00000455883 ST6GALNAC2Q9UJ37 374 aa4.49□□□□□ -1.69
CSMD3-204ENST00000455883 CD3EP07766 207 aa4.48□□□□□ -1.69
CSMD3-204ENST00000455883 PF4V1P10720 104 aa4.48□□□□□ -1.69
CSMD3-204ENST00000455883 IL36RNQ9UBH0 155 aa4.48□□□□□ -1.69
CSMD3-204ENST00000455883 ATRQ13535 2644 aa4.48□□□□□ -1.69
CSMD3-204ENST00000455883 ZNF32P17041 273 aa4.48□□□□□ -1.69
CSMD3-204ENST00000455883 LYZP61626 148 aa4.48□□□□□ -1.69
CSMD3-204ENST00000455883 ZIC1Q15915 447 aa4.48□□□□□ -1.69
CSMD3-204ENST00000455883 PRSS36Q5K4E3 855 aa4.48□□□□□ -1.69
CSMD3-204ENST00000455883 Q6ZVH6 145 aa4.48□□□□□ -1.69
CSMD3-204ENST00000455883 DPM2O94777 84 aa4.48□□□□□ -1.69
CSMD3-204ENST00000455883 WISP3O95389 354 aaPredicted RBP4.48□□□□□ -1.69
CSMD3-204ENST00000455883 REG1AP05451 166 aa4.48□□□□□ -1.69
CSMD3-204ENST00000455883 SELENOPP49908 381 aa4.48□□□□□ -1.69
CSMD3-204ENST00000455883 SRSF1Q07955 248 aaKnown RBP eCLIP4.48□□□□□ -1.69
CSMD3-204ENST00000455883 C1orf194Q5T5A4 169 aa4.48□□□□□ -1.69
CSMD3-204ENST00000455883 MOB3BQ86TA1 216 aa4.48□□□□□ -1.69
CSMD3-204ENST00000455883 ZNF502Q8TBZ5 544 aa4.48□□□□□ -1.69
CSMD3-204ENST00000455883 NPCDR1Q9BY65 106 aa4.48□□□□□ -1.69
CSMD3-204ENST00000455883 TMEM95Q3KNT9 176 aa4.48□□□□□ -1.69
CSMD3-204ENST00000455883 TIMP4Q99727 224 aa4.48□□□□□ -1.69
CSMD3-204ENST00000455883 C3orf80F5H4A9 247 aa4.48□□□□□ -1.69
CSMD3-204ENST00000455883 ARL14EPLP0DKL9 152 aa4.48□□□□□ -1.69
CSMD3-204ENST00000455883 VSIG8P0DPA2 414 aa4.48□□□□□ -1.69
CSMD3-204ENST00000455883 SRIP30626 198 aa4.48□□□□□ -1.69
CSMD3-204ENST00000455883 PLEKHB2Q96CS7 222 aa4.48□□□□□ -1.69
CSMD3-204ENST00000455883 RCC1LQ96I51 464 aaKnown RBP4.48□□□□□ -1.69
CSMD3-204ENST00000455883 C20orf144Q9BQM9 153 aa4.48□□□□□ -1.69
CSMD3-204ENST00000455883 IL11P20809 199 aa4.48□□□□□ -1.69
CSMD3-204ENST00000455883 CD40P25942 277 aa4.48□□□□□ -1.69
CSMD3-204ENST00000455883 TAL2Q16559 108 aa4.48□□□□□ -1.69
CSMD3-204ENST00000455883 SPNS3Q6ZMD2 512 aa4.48□□□□□ -1.69
CSMD3-204ENST00000455883 PHLDA1Q8WV24 401 aaPredicted RBP4.48□□□□□ -1.69
CSMD3-204ENST00000455883 RPP21Q9H633 154 aaKnown RBP4.48□□□□□ -1.69
CSMD3-204ENST00000455883 METTL12A8MUP2 240 aa4.48□□□□□ -1.69
CSMD3-204ENST00000455883 NKG7Q16617 165 aa4.48□□□□□ -1.69
CSMD3-204ENST00000455883 IER5LQ5T953 404 aa4.48□□□□□ -1.69
CSMD3-204ENST00000455883 SLC25A39Q9BZJ4 359 aaPredicted RBP4.48□□□□□ -1.69
CSMD3-204ENST00000455883 PAGE4O60829 102 aa4.48□□□□□ -1.69
CSMD3-204ENST00000455883 OR3A4PP47883 348 aa4.48□□□□□ -1.69
CSMD3-204ENST00000455883 TMEM258P61165 79 aa4.48□□□□□ -1.69
CSMD3-204ENST00000455883 FOXF1Q12946 379 aa4.48□□□□□ -1.69
CSMD3-204ENST00000455883 ZDHHC16Q969W1 377 aa4.48□□□□□ -1.69
CSMD3-204ENST00000455883 C5orf66Q9H5L9 145 aa4.48□□□□□ -1.69
CSMD3-204ENST00000455883 SIVA1O15304 175 aa4.48□□□□□ -1.69
CSMD3-204ENST00000455883 LINC00271P0C7V0 271 aa4.48□□□□□ -1.69
CSMD3-204ENST00000455883 PAAF1Q9BRP4 392 aa4.48□□□□□ -1.69
CSMD3-204ENST00000455883 FGF22Q9HCT0 170 aa4.48□□□□□ -1.69
CSMD3-204ENST00000455883 CEACAM5P06731 702 aa4.48□□□□□ -1.69
CSMD3-204ENST00000455883 PSG2P11465 335 aa4.48□□□□□ -1.69
CSMD3-204ENST00000455883 LRRC75AQ8NAA5 344 aa4.48□□□□□ -1.69
CSMD3-204ENST00000455883 RNF166Q96A37 237 aaPredicted RBP4.48□□□□□ -1.69
CSMD3-204ENST00000455883 WNT5BQ9H1J7 359 aa4.48□□□□□ -1.69
CSMD3-204ENST00000455883 MEGF9Q9H1U4 602 aa4.48□□□□□ -1.69
CSMD3-204ENST00000455883 SHISA9B4DS77 424 aa4.47□□□□□ -1.69
CSMD3-204ENST00000455883 RPL27AP46776 148 aaKnown RBP4.47□□□□□ -1.69
CSMD3-204ENST00000455883 UBE2V1Q13404 147 aa4.47□□□□□ -1.69
CSMD3-204ENST00000455883 H3BP45 60 aa4.47□□□□□ -1.69
CSMD3-204ENST00000455883 STATHP02808 62 aa4.47□□□□□ -1.69
CSMD3-204ENST00000455883 SHISA6Q6ZSJ9 500 aa4.47□□□□□ -1.69
CSMD3-204ENST00000455883 OR52M1Q8NGK5 317 aa4.47□□□□□ -1.69
CSMD3-204ENST00000455883 A0A1W2PRS3 328 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms