RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 G6PCP35575 357 aa11.45□□□□□ -0.58
HDAC4-204ENST00000446876 ZNF45Q02386 682 aa11.45□□□□□ -0.58
HDAC4-204ENST00000446876 SSBP1Q04837 148 aaKnown RBP11.45□□□□□ -0.58
HDAC4-204ENST00000446876 OR4C16Q8NGL9 310 aa11.45□□□□□ -0.58
HDAC4-204ENST00000446876 OR4A5Q8NH83 315 aa11.45□□□□□ -0.58
HDAC4-204ENST00000446876 DCUN1D4Q92564 292 aa11.45□□□□□ -0.58
HDAC4-204ENST00000446876 MRGPRFQ96AM1 343 aa11.45□□□□□ -0.58
HDAC4-204ENST00000446876 SOSTQ9BQB4 213 aa11.45□□□□□ -0.58
HDAC4-204ENST00000446876 ANKRD34BA5PLL1 514 aa11.44□□□□□ -0.58
HDAC4-204ENST00000446876 MARCH11A6NNE9 402 aa11.44□□□□□ -0.58
HDAC4-204ENST00000446876 KRASP01116 189 aa11.44□□□□□ -0.58
HDAC4-204ENST00000446876 REG1AP05451 166 aa11.44□□□□□ -0.58
HDAC4-204ENST00000446876 S100GP29377 79 aa11.44□□□□□ -0.58
HDAC4-204ENST00000446876 ERVK-16P61578 105 aa11.44□□□□□ -0.58
HDAC4-204ENST00000446876 TTC9CQ8N5M4 171 aa11.44□□□□□ -0.58
HDAC4-204ENST00000446876 OR13C8Q8NGS7 320 aa11.44□□□□□ -0.58
HDAC4-204ENST00000446876 MARCH1Q8TCQ1 289 aa11.44□□□□□ -0.58
HDAC4-204ENST00000446876 DLX4Q92988 240 aaPredicted RBP11.44□□□□□ -0.58
HDAC4-204ENST00000446876 AIFM2Q9BRQ8 373 aa11.44□□□□□ -0.58
HDAC4-204ENST00000446876 MCRIP2Q9BUT9 160 aaKnown RBP11.44□□□□□ -0.58
HDAC4-204ENST00000446876 RABL2AQ9UBK7 228 aaPredicted RBP11.44□□□□□ -0.58
HDAC4-204ENST00000446876 RABL2BQ9UNT1 228 aa11.44□□□□□ -0.58
HDAC4-204ENST00000446876 NSG2Q9Y328 171 aa11.44□□□□□ -0.58
HDAC4-204ENST00000446876 SEC14L6B5MCN3 397 aa11.43□□□□□ -0.58
HDAC4-204ENST00000446876 ZNF701M0R085 212 aaPredicted RBP11.43□□□□□ -0.58
HDAC4-204ENST00000446876 GSTZ1O43708 216 aaPredicted RBP11.43□□□□□ -0.58
HDAC4-204ENST00000446876 IGKV1-39P01597 117 aa11.43□□□□□ -0.58
HDAC4-204ENST00000446876 TRBV12-3P01733 135 aa11.43□□□□□ -0.58
HDAC4-204ENST00000446876 IGKV1D-39P04432 117 aa11.43□□□□□ -0.58
HDAC4-204ENST00000446876 PIGPP57054 158 aa11.43□□□□□ -0.58
HDAC4-204ENST00000446876 OR2B8PP59922 312 aa11.43□□□□□ -0.58
HDAC4-204ENST00000446876 RHOGP84095 191 aa11.43□□□□□ -0.58
HDAC4-204ENST00000446876 TERB2Q8NHR7 220 aa11.43□□□□□ -0.58
HDAC4-204ENST00000446876 AKIP1Q9NQ31 210 aa11.43□□□□□ -0.58
HDAC4-204ENST00000446876 V9GYH0 126 aa11.43□□□□□ -0.58
HDAC4-204ENST00000446876 A0A0G2JLM5 398 aa11.42□□□□□ -0.58
HDAC4-204ENST00000446876 ANKRD20A5PA0PJZ0 165 aa11.42□□□□□ -0.58
HDAC4-204ENST00000446876 DPPA5A6NC42 116 aa11.42□□□□□ -0.58
HDAC4-204ENST00000446876 OR2J3O76001 311 aa11.42□□□□□ -0.58
HDAC4-204ENST00000446876 BRI3O95415 125 aa11.42□□□□□ -0.58
HDAC4-204ENST00000446876 HSPB1P04792 205 aaKnown RBP11.42□□□□□ -0.58
HDAC4-204ENST00000446876 AKAIN1P0CW23 69 aa11.42□□□□□ -0.58
HDAC4-204ENST00000446876 RND3P61587 244 aa11.42□□□□□ -0.58
HDAC4-204ENST00000446876 EGFEM1PQ0D2K5 195 aa11.42□□□□□ -0.58
HDAC4-204ENST00000446876 MEF2DQ14814 521 aa11.42□□□□□ -0.58
HDAC4-204ENST00000446876 COMMD5Q9GZQ3 224 aa11.42□□□□□ -0.58
HDAC4-204ENST00000446876 ZNF257Q9Y2Q1 563 aa11.42□□□□□ -0.58
HDAC4-204ENST00000446876 TRBV9A0A0B4J1U6 114 aa11.41□□□□□ -0.58
HDAC4-204ENST00000446876 IGLC7A0M8Q6 106 aa11.41□□□□□ -0.58
HDAC4-204ENST00000446876 NPIPB5A8MRT5 1133 aa11.41□□□□□ -0.58
HDAC4-204ENST00000446876 DISC1C4P0D8 188 aa11.41□□□□□ -0.58
HDAC4-204ENST00000446876 OVOL1O14753 267 aa11.41□□□□□ -0.58
HDAC4-204ENST00000446876 PSMB6P28072 239 aa11.41□□□□□ -0.58
HDAC4-204ENST00000446876 S100A5P33763 92 aa11.41□□□□□ -0.58
HDAC4-204ENST00000446876 EXOSC2Q13868 293 aaKnown RBP11.41□□□□□ -0.58
HDAC4-204ENST00000446876 ZNF79Q15937 498 aa11.41□□□□□ -0.58
HDAC4-204ENST00000446876 PYDC2Q56P42 97 aa11.41□□□□□ -0.58
HDAC4-204ENST00000446876 C9orf66Q5T8R8 295 aa11.41□□□□□ -0.58
HDAC4-204ENST00000446876 OR10W1Q8NGF6 305 aa11.41□□□□□ -0.58
HDAC4-204ENST00000446876 ZNF486Q96H40 463 aaPredicted RBP11.41□□□□□ -0.58
HDAC4-204ENST00000446876 TP53RKQ96S44 253 aa11.41□□□□□ -0.58
HDAC4-204ENST00000446876 GPR61Q9BZJ8 451 aa11.41□□□□□ -0.58
HDAC4-204ENST00000446876 TEX50A0A1B0GTY4 177 aa11.4□□□□□ -0.58
HDAC4-204ENST00000446876 WI2-2373I1.2A0A1W2PRP0 233 aa11.4□□□□□ -0.58
HDAC4-204ENST00000446876 FAM223BA6NKX1 122 aa11.4□□□□□ -0.58
HDAC4-204ENST00000446876 DBX1A6NMT0 343 aa11.4□□□□□ -0.58
HDAC4-204ENST00000446876 H0Y980 276 aa11.4□□□□□ -0.58
HDAC4-204ENST00000446876 CTRB1P17538 263 aa11.4□□□□□ -0.58
HDAC4-204ENST00000446876 ATP5G2Q06055 141 aa11.4□□□□□ -0.58
HDAC4-204ENST00000446876 IZUMO4Q1ZYL8 232 aa11.4□□□□□ -0.58
HDAC4-204ENST00000446876 SP6Q3SY56 376 aa11.4□□□□□ -0.58
HDAC4-204ENST00000446876 CTRB2Q6GPI1 263 aa11.4□□□□□ -0.58
HDAC4-204ENST00000446876 ZNF343Q6P1L6 599 aa11.4□□□□□ -0.58
HDAC4-204ENST00000446876 CCDC190Q86UF4 302 aa11.4□□□□□ -0.58
HDAC4-204ENST00000446876 SLC25A42Q86VD7 318 aa11.4□□□□□ -0.58
HDAC4-204ENST00000446876 FAM223AQ8IWN6 122 aa11.4□□□□□ -0.58
HDAC4-204ENST00000446876 OR51S1Q8NGJ8 323 aa11.4□□□□□ -0.58
HDAC4-204ENST00000446876 ZFAND1Q8TCF1 268 aa11.4□□□□□ -0.58
HDAC4-204ENST00000446876 MRAPQ8TCY5 172 aa11.4□□□□□ -0.58
HDAC4-204ENST00000446876 TRIM63Q969Q1 353 aa11.4□□□□□ -0.58
HDAC4-204ENST00000446876 SEC22AQ96IW7 307 aa11.4□□□□□ -0.58
HDAC4-204ENST00000446876 USMG5Q96IX5 58 aa11.4□□□□□ -0.58
HDAC4-204ENST00000446876 FANCD2OSQ96PS1 177 aa11.4□□□□□ -0.58
HDAC4-204ENST00000446876 THAP7Q9BT49 309 aaPredicted RBP11.4□□□□□ -0.58
HDAC4-204ENST00000446876 HINT2Q9BX68 163 aa11.4□□□□□ -0.58
HDAC4-204ENST00000446876 QTRT1Q9BXR0 403 aaKnown RBP11.4□□□□□ -0.58
HDAC4-204ENST00000446876 FAM212BQ9NTI7 297 aaPredicted RBP11.4□□□□□ -0.58
HDAC4-204ENST00000446876 COPZ2Q9P299 210 aa11.4□□□□□ -0.58
HDAC4-204ENST00000446876 S4R3C0 116 aa11.4□□□□□ -0.58
HDAC4-204ENST00000446876 C3orf85A0A1B0GTC6 90 aa11.39□□□□□ -0.59
HDAC4-204ENST00000446876 K7EIL1 84 aa11.39□□□□□ -0.59
HDAC4-204ENST00000446876 NDUFB8O95169 186 aa11.39□□□□□ -0.59
HDAC4-204ENST00000446876 IGHV3-23P01764 117 aa11.39□□□□□ -0.59
HDAC4-204ENST00000446876 SERPINE2P07093 398 aa11.39□□□□□ -0.59
HDAC4-204ENST00000446876 CRYGCP07315 174 aa11.39□□□□□ -0.59
HDAC4-204ENST00000446876 CTSDP07339 412 aaPredicted RBP11.39□□□□□ -0.59
HDAC4-204ENST00000446876 PTBP1P26599 531 aaKnown RBP eCLIP11.39□□□□□ -0.595e-7■■■■□ 24.7
HDAC4-204ENST00000446876 C15orf32Q32M92 178 aa11.39□□□□□ -0.59
HDAC4-204ENST00000446876 REC114Q7Z4M0 266 aa11.39□□□□□ -0.59
HDAC4-204ENST00000446876 CCDC71LQ8N9Z2 235 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms