RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 DYNLT3P51808 116 aa11.76□□□□□ -0.53
TNFRSF1A-204ENST00000440083 PAX9P55771 341 aa11.76□□□□□ -0.53
TNFRSF1A-204ENST00000440083 OR2B8PP59922 312 aa11.76□□□□□ -0.53
TNFRSF1A-204ENST00000440083 HBG1P69891 147 aa11.76□□□□□ -0.53
TNFRSF1A-204ENST00000440083 HBG2P69892 147 aa11.76□□□□□ -0.53
TNFRSF1A-204ENST00000440083 SLC25A24Q6NUK1 477 aa11.76□□□□□ -0.53
TNFRSF1A-204ENST00000440083 PNKDQ8N490 385 aa11.76□□□□□ -0.53
TNFRSF1A-204ENST00000440083 KIR3DL3Q8N743 410 aa11.76□□□□□ -0.53
TNFRSF1A-204ENST00000440083 OR5C1Q8NGR4 320 aa11.76□□□□□ -0.53
TNFRSF1A-204ENST00000440083 CXorf58Q96LI9 332 aa11.76□□□□□ -0.53
TNFRSF1A-204ENST00000440083 FAM210AQ96ND0 272 aa11.76□□□□□ -0.53
TNFRSF1A-204ENST00000440083 CLEC7AQ9BXN2 247 aa11.76□□□□□ -0.53
TNFRSF1A-204ENST00000440083 AMMECR1Q9Y4X0 333 aaPredicted RBP11.76□□□□□ -0.53
TNFRSF1A-204ENST00000440083 IGHV2-26A0A0B4J1V2 119 aa11.75□□□□□ -0.53
TNFRSF1A-204ENST00000440083 CENPVL3A0A0U1RRI6 287 aa11.75□□□□□ -0.53
TNFRSF1A-204ENST00000440083 A0A1W2PRD5 423 aa11.75□□□□□ -0.53
TNFRSF1A-204ENST00000440083 A0A1W2PRF3 423 aa11.75□□□□□ -0.53
TNFRSF1A-204ENST00000440083 A0A1W2PRM7 423 aa11.75□□□□□ -0.53
TNFRSF1A-204ENST00000440083 H7C2Y5 167 aa11.75□□□□□ -0.53
TNFRSF1A-204ENST00000440083 SCAF4O95104 1147 aaKnown RBP11.75□□□□□ -0.53
TNFRSF1A-204ENST00000440083 CT45A6P0DMU7 189 aa11.75□□□□□ -0.53
TNFRSF1A-204ENST00000440083 CT45A5P0DMU8 189 aa11.75□□□□□ -0.53
TNFRSF1A-204ENST00000440083 CT45A7P0DMV0 189 aa11.75□□□□□ -0.53
TNFRSF1A-204ENST00000440083 RAB13P51153 203 aa11.75□□□□□ -0.53
TNFRSF1A-204ENST00000440083 SPANXN5Q5MJ07 72 aa11.75□□□□□ -0.53
TNFRSF1A-204ENST00000440083 TGIF2LXQ8IUE1 241 aa11.75□□□□□ -0.53
TNFRSF1A-204ENST00000440083 LILRB2Q8N423 598 aa11.75□□□□□ -0.53
TNFRSF1A-204ENST00000440083 C11orf42Q8N5U0 333 aa11.75□□□□□ -0.53
TNFRSF1A-204ENST00000440083 TMEM217Q8N7C4 229 aa11.75□□□□□ -0.53
TNFRSF1A-204ENST00000440083 OR13D1Q8NGV5 346 aa11.75□□□□□ -0.53
TNFRSF1A-204ENST00000440083 DTD1Q8TEA8 209 aa11.75□□□□□ -0.53
TNFRSF1A-204ENST00000440083 TSNAXQ99598 290 aaKnown RBP11.75□□□□□ -0.53
TNFRSF1A-204ENST00000440083 ATP5SQ99766 215 aa11.75□□□□□ -0.53
TNFRSF1A-204ENST00000440083 GINS3Q9BRX5 216 aa11.75□□□□□ -0.53
TNFRSF1A-204ENST00000440083 QTRT1Q9BXR0 403 aaKnown RBP11.75□□□□□ -0.53
TNFRSF1A-204ENST00000440083 WFDC1Q9HC57 220 aa11.75□□□□□ -0.53
TNFRSF1A-204ENST00000440083 MED9Q9NWA0 146 aa11.75□□□□□ -0.53
TNFRSF1A-204ENST00000440083 MDFIC2A0A1B0GVS7 189 aa11.74□□□□□ -0.53
TNFRSF1A-204ENST00000440083 LEUTXA8MZ59 168 aa11.74□□□□□ -0.53
TNFRSF1A-204ENST00000440083 RNASEK-C17orf49H0YIS7 233 aa11.74□□□□□ -0.53
TNFRSF1A-204ENST00000440083 M0R1W7 72 aa11.74□□□□□ -0.53
TNFRSF1A-204ENST00000440083 FBXO24O75426 580 aa11.74□□□□□ -0.53
TNFRSF1A-204ENST00000440083 IFNA5P01569 189 aa11.74□□□□□ -0.53
TNFRSF1A-204ENST00000440083 METTL15P1P0C7V9 234 aa11.74□□□□□ -0.53
TNFRSF1A-204ENST00000440083 COX7A1P24310 79 aa11.74□□□□□ -0.53
TNFRSF1A-204ENST00000440083 REG1BP48304 166 aa11.74□□□□□ -0.53
TNFRSF1A-204ENST00000440083 ZNF137PP52743 207 aa11.74□□□□□ -0.53
TNFRSF1A-204ENST00000440083 RPP30P78346 268 aaKnown RBP11.74□□□□□ -0.53
TNFRSF1A-204ENST00000440083 HCP5Q6MZN7 132 aa11.74□□□□□ -0.53
TNFRSF1A-204ENST00000440083 PDPNQ86YL7 162 aa11.74□□□□□ -0.53
TNFRSF1A-204ENST00000440083 VKORC1L1Q8N0U8 176 aa11.74□□□□□ -0.53
TNFRSF1A-204ENST00000440083 TEX29Q8N6K0 151 aa11.74□□□□□ -0.53
TNFRSF1A-204ENST00000440083 HSD17B11Q8NBQ5 300 aa11.74□□□□□ -0.53
TNFRSF1A-204ENST00000440083 RHOVQ96L33 236 aa11.74□□□□□ -0.53
TNFRSF1A-204ENST00000440083 ZNF48Q96MX3 618 aaPredicted RBP11.74□□□□□ -0.53
TNFRSF1A-204ENST00000440083 ARV1Q9H2C2 271 aa11.74□□□□□ -0.53
TNFRSF1A-204ENST00000440083 STRAPQ9Y3F4 350 aaKnown RBP11.74□□□□□ -0.53
TNFRSF1A-204ENST00000440083 IGHV1-69DA0A0B4J2H0 117 aa11.73□□□□□ -0.53
TNFRSF1A-204ENST00000440083 ZNF705EA8MWA4 302 aaPredicted RBP11.73□□□□□ -0.53
TNFRSF1A-204ENST00000440083 SHOXO15266 292 aa11.73□□□□□ -0.53
TNFRSF1A-204ENST00000440083 IGHV1-69P01742 117 aa11.73□□□□□ -0.53
TNFRSF1A-204ENST00000440083 SEC11BP0C7V7 166 aa11.73□□□□□ -0.53
TNFRSF1A-204ENST00000440083 HOXA1P49639 335 aaPredicted RBP11.73□□□□□ -0.53
TNFRSF1A-204ENST00000440083 SPCS3P61009 180 aa11.73□□□□□ -0.53
TNFRSF1A-204ENST00000440083 POU2AF1Q16633 256 aa11.73□□□□□ -0.53
TNFRSF1A-204ENST00000440083 OR4A47Q6IF82 309 aa11.73□□□□□ -0.53
TNFRSF1A-204ENST00000440083 OR52E5Q8NH55 327 aa11.73□□□□□ -0.53
TNFRSF1A-204ENST00000440083 OSR1Q8TAX0 266 aaPredicted RBP11.73□□□□□ -0.53
TNFRSF1A-204ENST00000440083 HARBI1Q96MB7 349 aa11.73□□□□□ -0.53
TNFRSF1A-204ENST00000440083 NABP2Q9BQ15 211 aa11.73□□□□□ -0.53
TNFRSF1A-204ENST00000440083 MS4A7Q9GZW8 240 aaPredicted RBP11.73□□□□□ -0.53
TNFRSF1A-204ENST00000440083 ENY2Q9NPA8 101 aa11.73□□□□□ -0.53
TNFRSF1A-204ENST00000440083 WASHC3Q9Y3C0 194 aa11.73□□□□□ -0.53
TNFRSF1A-204ENST00000440083 COL6A5A8TX70 2615 aa11.72□□□□□ -0.53
TNFRSF1A-204ENST00000440083 ANKRD34BA5PLL1 514 aa11.72□□□□□ -0.53
TNFRSF1A-204ENST00000440083 C15orf61A6NNL5 157 aa11.72□□□□□ -0.53
TNFRSF1A-204ENST00000440083 H0YJW9 148 aa11.72□□□□□ -0.53
TNFRSF1A-204ENST00000440083 FGF16O43320 207 aa11.72□□□□□ -0.53
TNFRSF1A-204ENST00000440083 PRTN3P24158 256 aa11.72□□□□□ -0.53
TNFRSF1A-204ENST00000440083 SULT1A2P50226 295 aa11.72□□□□□ -0.53
TNFRSF1A-204ENST00000440083 RELBQ01201 579 aa11.72□□□□□ -0.53
TNFRSF1A-204ENST00000440083 SLC38A11Q08AI6 406 aa11.72□□□□□ -0.53
TNFRSF1A-204ENST00000440083 HLA-DRB5Q30154 266 aa11.72□□□□□ -0.53
TNFRSF1A-204ENST00000440083 STPG2Q8N412 459 aa11.72□□□□□ -0.53
TNFRSF1A-204ENST00000440083 SIGLECL1Q8N7X8 197 aa11.72□□□□□ -0.53
TNFRSF1A-204ENST00000440083 BEND2Q8NDZ0 799 aa11.72□□□□□ -0.53
TNFRSF1A-204ENST00000440083 OR5AN1Q8NGI8 311 aa11.72□□□□□ -0.53
TNFRSF1A-204ENST00000440083 SCGB1C1Q8TD33 95 aa11.72□□□□□ -0.53
TNFRSF1A-204ENST00000440083 ZDHHC16Q969W1 377 aa11.72□□□□□ -0.53
TNFRSF1A-204ENST00000440083 GNPNAT1Q96EK6 184 aaPredicted RBP11.72□□□□□ -0.53
TNFRSF1A-204ENST00000440083 HIPK2Q9H2X6 1198 aa11.72□□□□□ -0.53
TNFRSF1A-204ENST00000440083 PRNDQ9UKY0 176 aa11.72□□□□□ -0.53
TNFRSF1A-204ENST00000440083 FOXA2Q9Y261 457 aaPredicted RBP11.72□□□□□ -0.53
TNFRSF1A-204ENST00000440083 FGF2P09038 288 aa11.71□□□□□ -0.53
TNFRSF1A-204ENST00000440083 SPP1P10451 314 aa11.71□□□□□ -0.53
TNFRSF1A-204ENST00000440083 MC5RP33032 325 aa11.71□□□□□ -0.53
TNFRSF1A-204ENST00000440083 BLOC1S1P78537 153 aa11.71□□□□□ -0.53
TNFRSF1A-204ENST00000440083 AANATQ16613 207 aa11.71□□□□□ -0.53
TNFRSF1A-204ENST00000440083 AARDQ4LEZ3 155 aa11.71□□□□□ -0.53
TNFRSF1A-204ENST00000440083 SPINK9Q5DT21 86 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms