RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 TAS2R19P59542 299 aa18.2■□□□□ 0.5
VARS-217ENST00000440048 ERVK-16P61578 105 aa18.2■□□□□ 0.5
VARS-217ENST00000440048 RHOGP84095 191 aa18.2■□□□□ 0.5
VARS-217ENST00000440048 IL18Q14116 193 aa18.2■□□□□ 0.5
VARS-217ENST00000440048 TBC1D26Q86UD7 250 aa18.2■□□□□ 0.5
VARS-217ENST00000440048 OR4D10Q8NGI6 311 aa18.2■□□□□ 0.5
VARS-217ENST00000440048 NXF2Q9GZY0 626 aaKnown RBP18.2■□□□□ 0.5
VARS-217ENST00000440048 RANGRFQ9HD47 186 aaPredicted RBP18.2■□□□□ 0.5
VARS-217ENST00000440048 AKIP1Q9NQ31 210 aa18.2■□□□□ 0.5
VARS-217ENST00000440048 SLC2A9Q9NRM0 540 aa18.2■□□□□ 0.5
VARS-217ENST00000440048 RABL2AQ9UBK7 228 aaPredicted RBP18.2■□□□□ 0.5
VARS-217ENST00000440048 RABL2BQ9UNT1 228 aa18.2■□□□□ 0.5
VARS-217ENST00000440048 TRBV9A0A0B4J1U6 114 aa18.19■□□□□ 0.5
VARS-217ENST00000440048 CCDC160A6NGH7 325 aa18.19■□□□□ 0.5
VARS-217ENST00000440048 CGB1A6NKQ9 187 aa18.19■□□□□ 0.5
VARS-217ENST00000440048 CTDSPLO15194 276 aa18.19■□□□□ 0.5
VARS-217ENST00000440048 SSBP1Q04837 148 aaKnown RBP18.19■□□□□ 0.5
VARS-217ENST00000440048 ZNF343Q6P1L6 599 aa18.19■□□□□ 0.5
VARS-217ENST00000440048 MCFD2Q8NI22 146 aa18.19■□□□□ 0.5
VARS-217ENST00000440048 SMIM4Q8WVI0 70 aa18.19■□□□□ 0.5
VARS-217ENST00000440048 ZNF257Q9Y2Q1 563 aa18.19■□□□□ 0.5
VARS-217ENST00000440048 DPPA5A6NC42 116 aa18.18■□□□□ 0.5
VARS-217ENST00000440048 MARCH11A6NNE9 402 aa18.18■□□□□ 0.5
VARS-217ENST00000440048 NPIPB5A8MRT5 1133 aa18.18■□□□□ 0.5
VARS-217ENST00000440048 RAB3DO95716 219 aa18.18■□□□□ 0.5
VARS-217ENST00000440048 PGAM2P15259 253 aa18.18■□□□□ 0.5
VARS-217ENST00000440048 AREGP15514 252 aa18.18■□□□□ 0.5
VARS-217ENST00000440048 OR2B8PP59922 312 aa18.18■□□□□ 0.5
VARS-217ENST00000440048 STEAP1BQ6NZ63 245 aa18.18■□□□□ 0.5
VARS-217ENST00000440048 C19orf35Q6ZS72 473 aa18.18■□□□□ 0.5
VARS-217ENST00000440048 ZMAT5Q9UDW3 170 aaKnown RBP18.18■□□□□ 0.5
VARS-217ENST00000440048 FAM223BA6NKX1 122 aa18.17■□□□□ 0.5
VARS-217ENST00000440048 KRASP01116 189 aa18.17■□□□□ 0.5
VARS-217ENST00000440048 TNFSF8P32971 234 aa18.17■□□□□ 0.5
VARS-217ENST00000440048 G6PCP35575 357 aa18.17■□□□□ 0.5
VARS-217ENST00000440048 FAM223AQ8IWN6 122 aa18.17■□□□□ 0.5
VARS-217ENST00000440048 COMMD5Q9GZQ3 224 aa18.17■□□□□ 0.5
VARS-217ENST00000440048 RBM38Q9H0Z9 239 aaKnown RBP18.17■□□□□ 0.5
VARS-217ENST00000440048 FAM212BQ9NTI7 297 aaPredicted RBP18.17■□□□□ 0.5
VARS-217ENST00000440048 TRBV12-3P01733 135 aa18.16■□□□□ 0.5
VARS-217ENST00000440048 CRYGCP07315 174 aa18.16■□□□□ 0.5
VARS-217ENST00000440048 FGF2P09038 288 aa18.16■□□□□ 0.5
VARS-217ENST00000440048 PI3P19957 117 aa18.16■□□□□ 0.5
VARS-217ENST00000440048 ZP3P21754 424 aa18.16■□□□□ 0.5
VARS-217ENST00000440048 PSMB6P28072 239 aa18.16■□□□□ 0.5
VARS-217ENST00000440048 INSL3P51460 131 aa18.16■□□□□ 0.5
VARS-217ENST00000440048 ATP5G2Q06055 141 aa18.16■□□□□ 0.5
VARS-217ENST00000440048 NECAP1Q8NC96 275 aa18.16■□□□□ 0.5
VARS-217ENST00000440048 ZNF486Q96H40 463 aaPredicted RBP18.16■□□□□ 0.5
VARS-217ENST00000440048 SOSTQ9BQB4 213 aa18.16■□□□□ 0.5
VARS-217ENST00000440048 PEF1Q9UBV8 284 aaKnown RBP18.16■□□□□ 0.5
VARS-217ENST00000440048 SORL1Q92673 2214 aa18.15■□□□□ 0.5
VARS-217ENST00000440048 OR2J3O76001 311 aa18.15■□□□□ 0.5
VARS-217ENST00000440048 CTRB1P17538 263 aa18.15■□□□□ 0.5
VARS-217ENST00000440048 PPP5CP53041 499 aa18.15■□□□□ 0.5
VARS-217ENST00000440048 RND3P61587 244 aa18.15■□□□□ 0.5
VARS-217ENST00000440048 EXOSC2Q13868 293 aaKnown RBP18.15■□□□□ 0.5
VARS-217ENST00000440048 SCGB2B2Q4G0G5 96 aa18.15■□□□□ 0.5
VARS-217ENST00000440048 CTRB2Q6GPI1 263 aa18.15■□□□□ 0.5
VARS-217ENST00000440048 CADM3Q8N126 398 aa18.15■□□□□ 0.5
VARS-217ENST00000440048 TERB2Q8NHR7 220 aa18.15■□□□□ 0.5
VARS-217ENST00000440048 RSL24D1Q9UHA3 163 aaKnown RBP18.15■□□□□ 0.5
VARS-217ENST00000440048 REG1AP05451 166 aa18.14■□□□□ 0.49
VARS-217ENST00000440048 ECI1P42126 302 aa18.14■□□□□ 0.49
VARS-217ENST00000440048 FAAP20Q6NZ36 180 aa18.14■□□□□ 0.49
VARS-217ENST00000440048 ACSM6Q6P461 480 aa18.14■□□□□ 0.49
VARS-217ENST00000440048 ZNF429Q86V71 674 aa18.14■□□□□ 0.49
VARS-217ENST00000440048 FANCD2OSQ96PS1 177 aa18.14■□□□□ 0.49
VARS-217ENST00000440048 IGLC7A0M8Q6 106 aa18.13■□□□□ 0.49
VARS-217ENST00000440048 FABP12A6NFH5 140 aa18.13■□□□□ 0.49
VARS-217ENST00000440048 GSTZ1O43708 216 aaPredicted RBP18.13■□□□□ 0.49
VARS-217ENST00000440048 SAP30O75446 220 aa18.13■□□□□ 0.49
VARS-217ENST00000440048 IGKV1-39P01597 117 aa18.13■□□□□ 0.49
VARS-217ENST00000440048 IGKV1D-39P04432 117 aa18.13■□□□□ 0.49
VARS-217ENST00000440048 PTBP1P26599 531 aaKnown RBP eCLIP18.13■□□□□ 0.49
VARS-217ENST00000440048 PIGPP57054 158 aa18.13■□□□□ 0.49
VARS-217ENST00000440048 KLF5Q13887 457 aaPredicted RBP18.13■□□□□ 0.49
VARS-217ENST00000440048 MEF2DQ14814 521 aa18.13■□□□□ 0.49
VARS-217ENST00000440048 C15orf32Q32M92 178 aa18.13■□□□□ 0.49
VARS-217ENST00000440048 SRSF8Q9BRL6 282 aaKnown RBP18.13■□□□□ 0.49
VARS-217ENST00000440048 QTRT1Q9BXR0 403 aaKnown RBP18.13■□□□□ 0.49
VARS-217ENST00000440048 FBXL7Q9UJT9 491 aa18.13■□□□□ 0.49
VARS-217ENST00000440048 NSG2Q9Y328 171 aa18.13■□□□□ 0.49
VARS-217ENST00000440048 TEX50A0A1B0GTY4 177 aa18.12■□□□□ 0.49
VARS-217ENST00000440048 SNAPC5O75971 98 aa18.12■□□□□ 0.49
VARS-217ENST00000440048 DHFRP00374 187 aa18.12■□□□□ 0.49
VARS-217ENST00000440048 AKAIN1P0CW23 69 aa18.12■□□□□ 0.49
VARS-217ENST00000440048 KLK9Q2XQG4 91 aa18.12■□□□□ 0.49
VARS-217ENST00000440048 OR1L8Q8NGR8 309 aa18.12■□□□□ 0.49
VARS-217ENST00000440048 OR13C8Q8NGS7 320 aa18.12■□□□□ 0.49
VARS-217ENST00000440048 ZFAND1Q8TCF1 268 aa18.12■□□□□ 0.49
VARS-217ENST00000440048 MARCH1Q8TCQ1 289 aa18.12■□□□□ 0.49
VARS-217ENST00000440048 MRGPRFQ96AM1 343 aa18.12■□□□□ 0.49
VARS-217ENST00000440048 KLK9Q9UKQ9 250 aa18.12■□□□□ 0.49
VARS-217ENST00000440048 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP18.11■□□□□ 0.49
VARS-217ENST00000440048 TRAPPC2P0DI81 140 aa18.11■□□□□ 0.49
VARS-217ENST00000440048 TRAPPC2BP0DI82 140 aa18.11■□□□□ 0.49
VARS-217ENST00000440048 DEFB121Q5J5C9 76 aa18.11■□□□□ 0.49
VARS-217ENST00000440048 OR10W1Q8NGF6 305 aa18.11■□□□□ 0.49
VARS-217ENST00000440048 OR4C16Q8NGL9 310 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms