RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 RANBP3Q9H6Z4 567 aaPredicted RBP5.61□□□□□ -1.51
LSM3P3-201ENST00000436601 PLSCR3Q9NRY6 295 aa5.61□□□□□ -1.51
LSM3P3-201ENST00000436601 GSKIPQ9P0R6 139 aa5.61□□□□□ -1.51
LSM3P3-201ENST00000436601 CACNG5Q9UF02 275 aa5.61□□□□□ -1.51
LSM3P3-201ENST00000436601 NSG2Q9Y328 171 aa5.61□□□□□ -1.51
LSM3P3-201ENST00000436601 FAM96BQ9Y3D0 163 aa5.61□□□□□ -1.51
LSM3P3-201ENST00000436601 ABCA12Q86UK0 2595 aa5.61□□□□□ -1.51
LSM3P3-201ENST00000436601 TRAV14DV4A0A0A6YYC5 116 aa5.6□□□□□ -1.51
LSM3P3-201ENST00000436601 SLC25A17O43808 307 aa5.6□□□□□ -1.51
LSM3P3-201ENST00000436601 KBTBD11O94819 623 aa5.6□□□□□ -1.51
LSM3P3-201ENST00000436601 NXPH3O95157 252 aa5.6□□□□□ -1.51
LSM3P3-201ENST00000436601 TNFRSF6BO95407 300 aa5.6□□□□□ -1.51
LSM3P3-201ENST00000436601 MBPP02686 304 aaPredicted RBP5.6□□□□□ -1.51
LSM3P3-201ENST00000436601 FBP1P09467 338 aa5.6□□□□□ -1.51
LSM3P3-201ENST00000436601 FAM106CPP0CH98 169 aa5.6□□□□□ -1.51
LSM3P3-201ENST00000436601 MYOD1P15172 320 aa5.6□□□□□ -1.51
LSM3P3-201ENST00000436601 ARHGDIBP52566 201 aa5.6□□□□□ -1.51
LSM3P3-201ENST00000436601 CYCSP99999 105 aaKnown RBP5.6□□□□□ -1.51
LSM3P3-201ENST00000436601 HES1Q14469 280 aa5.6□□□□□ -1.51
LSM3P3-201ENST00000436601 AARDQ4LEZ3 155 aa5.6□□□□□ -1.51
LSM3P3-201ENST00000436601 TEX45Q8NA69 505 aa5.6□□□□□ -1.51
LSM3P3-201ENST00000436601 NPBQ8NG41 125 aa5.6□□□□□ -1.51
LSM3P3-201ENST00000436601 OR2T35Q8NGX2 323 aa5.6□□□□□ -1.51
LSM3P3-201ENST00000436601 TMEM167AQ8TBQ9 72 aa5.6□□□□□ -1.51
LSM3P3-201ENST00000436601 PPP1R1CQ8WVI7 109 aa5.6□□□□□ -1.51
LSM3P3-201ENST00000436601 ASB13Q8WXK3 278 aa5.6□□□□□ -1.51
LSM3P3-201ENST00000436601 ZNF48Q96MX3 618 aaPredicted RBP5.6□□□□□ -1.51
LSM3P3-201ENST00000436601 TSNAXQ99598 290 aaKnown RBP5.6□□□□□ -1.51
LSM3P3-201ENST00000436601 SPIN2AQ99865 258 aa5.6□□□□□ -1.51
LSM3P3-201ENST00000436601 SSX3Q99909 188 aa5.6□□□□□ -1.51
LSM3P3-201ENST00000436601 SPIN2BQ9BPZ2 258 aa5.6□□□□□ -1.51
LSM3P3-201ENST00000436601 AIFM2Q9BRQ8 373 aa5.6□□□□□ -1.51
LSM3P3-201ENST00000436601 RNF126Q9BV68 326 aa5.6□□□□□ -1.51
LSM3P3-201ENST00000436601 QTRT1Q9BXR0 403 aaKnown RBP5.6□□□□□ -1.51
LSM3P3-201ENST00000436601 PRDM13Q9H4Q3 707 aa5.6□□□□□ -1.51
LSM3P3-201ENST00000436601 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.6□□□□□ -1.51
LSM3P3-201ENST00000436601 COA4Q9NYJ1 87 aa5.6□□□□□ -1.51
LSM3P3-201ENST00000436601 BET1LQ9NYM9 111 aa5.6□□□□□ -1.51
LSM3P3-201ENST00000436601 PRRC2AP48634 2157 aaKnown RBP5.6□□□□□ -1.51
LSM3P3-201ENST00000436601 DSCAML1Q8TD84 2053 aa5.59□□□□□ -1.51
LSM3P3-201ENST00000436601 A6NDX4 124 aa5.59□□□□□ -1.51
LSM3P3-201ENST00000436601 H0YIZ8 118 aa5.59□□□□□ -1.51
LSM3P3-201ENST00000436601 H3BUX3 64 aa5.59□□□□□ -1.51
LSM3P3-201ENST00000436601 FCN1O00602 326 aa5.59□□□□□ -1.51
LSM3P3-201ENST00000436601 RRHO14718 337 aa5.59□□□□□ -1.51
LSM3P3-201ENST00000436601 NBR2O15453 112 aa5.59□□□□□ -1.51
LSM3P3-201ENST00000436601 ST8SIA3O43173 380 aa5.59□□□□□ -1.51
LSM3P3-201ENST00000436601 NDUFA3O95167 84 aa5.59□□□□□ -1.51
LSM3P3-201ENST00000436601 SPDEFO95238 335 aa5.59□□□□□ -1.51
LSM3P3-201ENST00000436601 TMEM11P17152 192 aa5.59□□□□□ -1.51
LSM3P3-201ENST00000436601 PSMB6P28072 239 aa5.59□□□□□ -1.51
LSM3P3-201ENST00000436601 IER3P46695 156 aa5.59□□□□□ -1.51
LSM3P3-201ENST00000436601 OR2B8PP59922 312 aa5.59□□□□□ -1.51
LSM3P3-201ENST00000436601 PJVKQ0ZLH3 352 aa5.59□□□□□ -1.51
LSM3P3-201ENST00000436601 AANATQ16613 207 aa5.59□□□□□ -1.51
LSM3P3-201ENST00000436601 PRSS8Q16651 343 aa5.59□□□□□ -1.51
LSM3P3-201ENST00000436601 LRRC75BQ2VPJ9 315 aa5.59□□□□□ -1.51
LSM3P3-201ENST00000436601 VMA21Q3ZAQ7 101 aa5.59□□□□□ -1.51
LSM3P3-201ENST00000436601 LRRC37A5PQ49AS3 106 aa5.59□□□□□ -1.51
LSM3P3-201ENST00000436601 THOC7Q6I9Y2 204 aaKnown RBP5.59□□□□□ -1.51
LSM3P3-201ENST00000436601 C11orf87Q6NUJ2 197 aa5.59□□□□□ -1.51
LSM3P3-201ENST00000436601 Q6YL49 198 aa5.59□□□□□ -1.51
LSM3P3-201ENST00000436601 FOXRED2Q8IWF2 684 aa5.59□□□□□ -1.51
LSM3P3-201ENST00000436601 CCDC28AQ8IWP9 274 aa5.59□□□□□ -1.51
LSM3P3-201ENST00000436601 TEX29Q8N6K0 151 aa5.59□□□□□ -1.51
LSM3P3-201ENST00000436601 Q8N9W7 124 aa5.59□□□□□ -1.51
LSM3P3-201ENST00000436601 OR11H4Q8NGC9 324 aa5.59□□□□□ -1.51
LSM3P3-201ENST00000436601 OR4A16Q8NH70 328 aa5.59□□□□□ -1.51
LSM3P3-201ENST00000436601 OR4A5Q8NH83 315 aa5.59□□□□□ -1.51
LSM3P3-201ENST00000436601 OR1S1Q8NH92 325 aa5.59□□□□□ -1.51
LSM3P3-201ENST00000436601 VSTM2AQ8TAG5 236 aa5.59□□□□□ -1.51
LSM3P3-201ENST00000436601 MAGT1Q9H0U3 335 aa5.59□□□□□ -1.51
LSM3P3-201ENST00000436601 FBXL15Q9H469 300 aa5.59□□□□□ -1.51
LSM3P3-201ENST00000436601 ZNF430Q9H8G1 570 aaPredicted RBP5.59□□□□□ -1.51
LSM3P3-201ENST00000436601 TMEM14BQ9NUH8 114 aa5.59□□□□□ -1.51
LSM3P3-201ENST00000436601 TMEM160Q9NX00 188 aa5.59□□□□□ -1.51
LSM3P3-201ENST00000436601 METTL1Q9UBP6 276 aaKnown RBP5.59□□□□□ -1.51
LSM3P3-201ENST00000436601 FOXA2Q9Y261 457 aaPredicted RBP5.59□□□□□ -1.51
LSM3P3-201ENST00000436601 SIGLEC9Q9Y336 463 aa5.59□□□□□ -1.51
LSM3P3-201ENST00000436601 TEX50A0A1B0GTY4 177 aa5.58□□□□□ -1.52
LSM3P3-201ENST00000436601 A0A1B0GW64 132 aa5.58□□□□□ -1.52
LSM3P3-201ENST00000436601 CGB1A6NKQ9 187 aa5.58□□□□□ -1.52
LSM3P3-201ENST00000436601 C15orf61A6NNL5 157 aa5.58□□□□□ -1.52
LSM3P3-201ENST00000436601 E7EUB6 86 aa5.58□□□□□ -1.52
LSM3P3-201ENST00000436601 BOLA2-SMG1P6H3BVE0 249 aa5.58□□□□□ -1.52
LSM3P3-201ENST00000436601 K7EPK0 472 aa5.58□□□□□ -1.52
LSM3P3-201ENST00000436601 SNAPC5O75971 98 aa5.58□□□□□ -1.52
LSM3P3-201ENST00000436601 MPC2O95563 127 aa5.58□□□□□ -1.52
LSM3P3-201ENST00000436601 TMEM50AO95807 157 aa5.58□□□□□ -1.52
LSM3P3-201ENST00000436601 IGHV4-59P01825 116 aa5.58□□□□□ -1.52
LSM3P3-201ENST00000436601 C1QBP02746 253 aa5.58□□□□□ -1.52
LSM3P3-201ENST00000436601 LYL1P12980 280 aa5.58□□□□□ -1.52
LSM3P3-201ENST00000436601 NKX2-1P43699 371 aaPredicted RBP5.58□□□□□ -1.52
LSM3P3-201ENST00000436601 PAX9P55771 341 aa5.58□□□□□ -1.52
LSM3P3-201ENST00000436601 POLR2GP62487 172 aaKnown RBP eCLIP5.58□□□□□ -1.52
LSM3P3-201ENST00000436601 RPL8P62917 257 aaKnown RBP5.58□□□□□ -1.52
LSM3P3-201ENST00000436601 SSBP2P81877 361 aaPredicted RBP5.58□□□□□ -1.52
LSM3P3-201ENST00000436601 TNFRSF9Q07011 255 aa5.58□□□□□ -1.52
LSM3P3-201ENST00000436601 MMDQ15546 238 aa5.58□□□□□ -1.52
LSM3P3-201ENST00000436601 PDLIM3Q53GG5 364 aaPredicted RBP5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms