RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 DCUN1D4Q92564 292 aa12.55□□□□□ -0.4
SMPD4-207ENST00000435455 ZNF486Q96H40 463 aaPredicted RBP12.55□□□□□ -0.4
SMPD4-207ENST00000435455 FYTTD1Q96QD9 318 aaKnown RBP12.55□□□□□ -0.4
SMPD4-207ENST00000435455 NXF2Q9GZY0 626 aaKnown RBP12.55□□□□□ -0.4
SMPD4-207ENST00000435455 RANGRFQ9HD47 186 aaPredicted RBP12.55□□□□□ -0.4
SMPD4-207ENST00000435455 SLC2A9Q9NRM0 540 aa12.55□□□□□ -0.4
SMPD4-207ENST00000435455 TMEM140Q9NV12 185 aa12.55□□□□□ -0.4
SMPD4-207ENST00000435455 RSL24D1Q9UHA3 163 aaKnown RBP12.55□□□□□ -0.4
SMPD4-207ENST00000435455 ZNF257Q9Y2Q1 563 aa12.55□□□□□ -0.4
SMPD4-207ENST00000435455 TRBV9A0A0B4J1U6 114 aa12.54□□□□□ -0.4
SMPD4-207ENST00000435455 NPIPB5A8MRT5 1133 aa12.54□□□□□ -0.4
SMPD4-207ENST00000435455 ZP3P21754 424 aa12.54□□□□□ -0.4
SMPD4-207ENST00000435455 INSL3P51460 131 aa12.54□□□□□ -0.4
SMPD4-207ENST00000435455 SLURP1P55000 103 aa12.54□□□□□ -0.4
SMPD4-207ENST00000435455 KRTAP10-11P60412 298 aa12.54□□□□□ -0.4
SMPD4-207ENST00000435455 RHOGP84095 191 aa12.54□□□□□ -0.4
SMPD4-207ENST00000435455 MEF2DQ14814 521 aa12.54□□□□□ -0.4
SMPD4-207ENST00000435455 ZNF585BQ52M93 769 aa12.54□□□□□ -0.4
SMPD4-207ENST00000435455 TBC1D26Q86UD7 250 aa12.54□□□□□ -0.4
SMPD4-207ENST00000435455 LHFPL1Q86WI0 220 aa12.54□□□□□ -0.4
SMPD4-207ENST00000435455 MRAPQ8TCY5 172 aa12.54□□□□□ -0.4
SMPD4-207ENST00000435455 COMMD5Q9GZQ3 224 aa12.54□□□□□ -0.4
SMPD4-207ENST00000435455 ZNF701M0R085 212 aaPredicted RBP12.53□□□□□ -0.4
SMPD4-207ENST00000435455 DHFRP00374 187 aa12.53□□□□□ -0.4
SMPD4-207ENST00000435455 TNFSF8P32971 234 aa12.53□□□□□ -0.4
SMPD4-207ENST00000435455 RND3P61587 244 aa12.53□□□□□ -0.4
SMPD4-207ENST00000435455 ZNF343Q6P1L6 599 aa12.53□□□□□ -0.4
SMPD4-207ENST00000435455 NECAP1Q8NC96 275 aa12.53□□□□□ -0.4
SMPD4-207ENST00000435455 TERB2Q8NHR7 220 aa12.53□□□□□ -0.4
SMPD4-207ENST00000435455 ZFAND1Q8TCF1 268 aa12.53□□□□□ -0.4
SMPD4-207ENST00000435455 DLX4Q92988 240 aaPredicted RBP12.53□□□□□ -0.4
SMPD4-207ENST00000435455 RBM38Q9H0Z9 239 aaKnown RBP12.53□□□□□ -0.4
SMPD4-207ENST00000435455 AKIP1Q9NQ31 210 aa12.53□□□□□ -0.4
SMPD4-207ENST00000435455 TRAV3A0A0B4J244 114 aa12.52□□□□□ -0.41
SMPD4-207ENST00000435455 A0A1B0GW64 132 aa12.52□□□□□ -0.41
SMPD4-207ENST00000435455 ANKRD34BA5PLL1 514 aa12.52□□□□□ -0.41
SMPD4-207ENST00000435455 E7EUB6 86 aa12.52□□□□□ -0.41
SMPD4-207ENST00000435455 GSTZ1O43708 216 aaPredicted RBP12.52□□□□□ -0.41
SMPD4-207ENST00000435455 SNAPC5O75971 98 aa12.52□□□□□ -0.41
SMPD4-207ENST00000435455 KRASP01116 189 aa12.52□□□□□ -0.41
SMPD4-207ENST00000435455 RPA2P15927 270 aa12.52□□□□□ -0.41
SMPD4-207ENST00000435455 PTBP1P26599 531 aaKnown RBP eCLIP12.52□□□□□ -0.417e-7■■■■□ 19.6
SMPD4-207ENST00000435455 OR2B8PP59922 312 aa12.52□□□□□ -0.41
SMPD4-207ENST00000435455 ATP5G2Q06055 141 aa12.52□□□□□ -0.41
SMPD4-207ENST00000435455 FAM209BQ5JX69 171 aa12.52□□□□□ -0.41
SMPD4-207ENST00000435455 THOC7Q6I9Y2 204 aaKnown RBP12.52□□□□□ -0.41
SMPD4-207ENST00000435455 ZNF429Q86V71 674 aa12.52□□□□□ -0.41
SMPD4-207ENST00000435455 OR4D10Q8NGI6 311 aa12.52□□□□□ -0.41
SMPD4-207ENST00000435455 SRSF8Q9BRL6 282 aaKnown RBP12.52□□□□□ -0.41
SMPD4-207ENST00000435455 PEF1Q9UBV8 284 aaKnown RBP12.52□□□□□ -0.41
SMPD4-207ENST00000435455 FABP12A6NFH5 140 aa12.51□□□□□ -0.41
SMPD4-207ENST00000435455 DISC1C4P0D8 188 aa12.51□□□□□ -0.41
SMPD4-207ENST00000435455 RBMXL2O75526 392 aaKnown RBP12.51□□□□□ -0.41
SMPD4-207ENST00000435455 PRH1P02810 166 aa12.51□□□□□ -0.41
SMPD4-207ENST00000435455 CRYGCP07315 174 aa12.51□□□□□ -0.41
SMPD4-207ENST00000435455 AKAIN1P0CW23 69 aa12.51□□□□□ -0.41
SMPD4-207ENST00000435455 MYOD1P15172 320 aa12.51□□□□□ -0.41
SMPD4-207ENST00000435455 AREGP15514 252 aa12.51□□□□□ -0.41
SMPD4-207ENST00000435455 HIST1H1BP16401 226 aaKnown RBP12.51□□□□□ -0.41
SMPD4-207ENST00000435455 PSMB6P28072 239 aa12.51□□□□□ -0.41
SMPD4-207ENST00000435455 G6PCP35575 357 aa12.51□□□□□ -0.41
SMPD4-207ENST00000435455 ECI1P42126 302 aa12.51□□□□□ -0.41
SMPD4-207ENST00000435455 PPP5CP53041 499 aa12.51□□□□□ -0.41
SMPD4-207ENST00000435455 DEFA5Q01523 94 aa12.51□□□□□ -0.41
SMPD4-207ENST00000435455 ZNF45Q02386 682 aa12.51□□□□□ -0.41
SMPD4-207ENST00000435455 EXOSC2Q13868 293 aaKnown RBP12.51□□□□□ -0.41
SMPD4-207ENST00000435455 SCGB2B2Q4G0G5 96 aa12.51□□□□□ -0.41
SMPD4-207ENST00000435455 TSC22D3Q99576 134 aa12.51□□□□□ -0.41
SMPD4-207ENST00000435455 SOSTQ9BQB4 213 aa12.51□□□□□ -0.41
SMPD4-207ENST00000435455 QTRT1Q9BXR0 403 aaKnown RBP12.51□□□□□ -0.41
SMPD4-207ENST00000435455 SORL1Q92673 2214 aa12.51□□□□□ -0.41
SMPD4-207ENST00000435455 WI2-2373I1.2A0A1W2PRP0 233 aa12.5□□□□□ -0.41
SMPD4-207ENST00000435455 CGB1A6NKQ9 187 aa12.5□□□□□ -0.41
SMPD4-207ENST00000435455 K7EIL1 84 aa12.5□□□□□ -0.41
SMPD4-207ENST00000435455 SERPINE2P07093 398 aa12.5□□□□□ -0.41
SMPD4-207ENST00000435455 CTRB1P17538 263 aa12.5□□□□□ -0.41
SMPD4-207ENST00000435455 S100A5P33763 92 aa12.5□□□□□ -0.41
SMPD4-207ENST00000435455 PIGPP57054 158 aa12.5□□□□□ -0.41
SMPD4-207ENST00000435455 CTRB2Q6GPI1 263 aa12.5□□□□□ -0.41
SMPD4-207ENST00000435455 ACSM6Q6P461 480 aa12.5□□□□□ -0.41
SMPD4-207ENST00000435455 HSD17B13Q7Z5P4 300 aaPredicted RBP12.5□□□□□ -0.41
SMPD4-207ENST00000435455 CCDC71LQ8N9Z2 235 aa12.5□□□□□ -0.41
SMPD4-207ENST00000435455 OR1L8Q8NGR8 309 aa12.5□□□□□ -0.41
SMPD4-207ENST00000435455 ELOVL1Q9BW60 279 aa12.5□□□□□ -0.41
SMPD4-207ENST00000435455 FKBP11Q9NYL4 201 aa12.5□□□□□ -0.41
SMPD4-207ENST00000435455 COPZ2Q9P299 210 aa12.5□□□□□ -0.41
SMPD4-207ENST00000435455 PRNDQ9UKY0 176 aa12.5□□□□□ -0.41
SMPD4-207ENST00000435455 IGLC7A0M8Q6 106 aa12.49□□□□□ -0.41
SMPD4-207ENST00000435455 ANKRD20A5PA0PJZ0 165 aa12.49□□□□□ -0.41
SMPD4-207ENST00000435455 H0Y980 276 aa12.49□□□□□ -0.41
SMPD4-207ENST00000435455 SAP30O75446 220 aa12.49□□□□□ -0.41
SMPD4-207ENST00000435455 OR2J3O76001 311 aa12.49□□□□□ -0.41
SMPD4-207ENST00000435455 TRAPPC2P0DI81 140 aa12.49□□□□□ -0.41
SMPD4-207ENST00000435455 TRAPPC2BP0DI82 140 aa12.49□□□□□ -0.41
SMPD4-207ENST00000435455 DEFA4P12838 97 aa12.49□□□□□ -0.41
SMPD4-207ENST00000435455 PI3P19957 117 aa12.49□□□□□ -0.41
SMPD4-207ENST00000435455 DCTN2Q13561 401 aaKnown RBP12.49□□□□□ -0.41
SMPD4-207ENST00000435455 KLK9Q2XQG4 91 aa12.49□□□□□ -0.41
SMPD4-207ENST00000435455 C15orf32Q32M92 178 aa12.49□□□□□ -0.41
SMPD4-207ENST00000435455 OR4C16Q8NGL9 310 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms