RNA–Protein interactions for RNA: ENST00000411552.5

NOD1-202, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-202ENST00000411552 RND3P61587 244 aa12.63□□□□□ -0.39
NOD1-202ENST00000411552 DEFA5Q01523 94 aa12.63□□□□□ -0.39
NOD1-202ENST00000411552 ZNF616Q08AN1 781 aa12.63□□□□□ -0.39
NOD1-202ENST00000411552 OR13C8Q8NGS7 320 aa12.63□□□□□ -0.39
NOD1-202ENST00000411552 MRGPRFQ96AM1 343 aa12.63□□□□□ -0.39
NOD1-202ENST00000411552 ZNF486Q96H40 463 aaPredicted RBP12.63□□□□□ -0.39
NOD1-202ENST00000411552 FYTTD1Q96QD9 318 aaKnown RBP12.63□□□□□ -0.39
NOD1-202ENST00000411552 FAM212BQ9NTI7 297 aaPredicted RBP12.63□□□□□ -0.39
NOD1-202ENST00000411552 C13orf42A0A1B0GVH6 325 aa12.62□□□□□ -0.39
NOD1-202ENST00000411552 DPPA5A6NC42 116 aa12.62□□□□□ -0.39
NOD1-202ENST00000411552 DISC1C4P0D8 188 aa12.62□□□□□ -0.39
NOD1-202ENST00000411552 RBMXL2O75526 392 aaKnown RBP12.62□□□□□ -0.39
NOD1-202ENST00000411552 G6PCP35575 357 aa12.62□□□□□ -0.39
NOD1-202ENST00000411552 PYDC2Q56P42 97 aa12.62□□□□□ -0.39
NOD1-202ENST00000411552 FOXB2Q5VYV0 432 aa12.62□□□□□ -0.39
NOD1-202ENST00000411552 CCDC190Q86UF4 302 aa12.62□□□□□ -0.39
NOD1-202ENST00000411552 TTC9CQ8N5M4 171 aa12.62□□□□□ -0.39
NOD1-202ENST00000411552 ZFAND1Q8TCF1 268 aa12.62□□□□□ -0.39
NOD1-202ENST00000411552 MARCH1Q8TCQ1 289 aa12.62□□□□□ -0.39
NOD1-202ENST00000411552 THAP7Q9BT49 309 aaPredicted RBP12.62□□□□□ -0.39
NOD1-202ENST00000411552 IGHV4OR15-8A0A075B7B6 117 aa12.61□□□□□ -0.39
NOD1-202ENST00000411552 A0A087WW49 117 aa12.61□□□□□ -0.39
NOD1-202ENST00000411552 A0A0G2JLM5 398 aa12.61□□□□□ -0.39
NOD1-202ENST00000411552 CGB1A6NKQ9 187 aa12.61□□□□□ -0.39
NOD1-202ENST00000411552 PRH1P02810 166 aa12.61□□□□□ -0.39
NOD1-202ENST00000411552 FGF2P09038 288 aa12.61□□□□□ -0.39
NOD1-202ENST00000411552 OR8U8P0C7N1 319 aa12.61□□□□□ -0.39
NOD1-202ENST00000411552 OR2B8PP59922 312 aa12.61□□□□□ -0.39
NOD1-202ENST00000411552 ZNF79Q15937 498 aa12.61□□□□□ -0.39
NOD1-202ENST00000411552 OR51S1Q8NGJ8 323 aa12.61□□□□□ -0.39
NOD1-202ENST00000411552 DPF1Q92782 380 aa12.61□□□□□ -0.39
NOD1-202ENST00000411552 MCRIP2Q9BUT9 160 aaKnown RBP12.61□□□□□ -0.39
NOD1-202ENST00000411552 NDUFA13Q9P0J0 144 aa12.61□□□□□ -0.39
NOD1-202ENST00000411552 LINC01619G3V211 115 aa12.6□□□□□ -0.39
NOD1-202ENST00000411552 IGKV1-39P01597 117 aa12.6□□□□□ -0.39
NOD1-202ENST00000411552 PRB2P02812 416 aaPredicted RBP12.6□□□□□ -0.39
NOD1-202ENST00000411552 IGKV1D-39P04432 117 aa12.6□□□□□ -0.39
NOD1-202ENST00000411552 AREGP15514 252 aa12.6□□□□□ -0.39
NOD1-202ENST00000411552 PTBP1P26599 531 aaKnown RBP eCLIP12.6□□□□□ -0.39
NOD1-202ENST00000411552 ZNF45Q02386 682 aa12.6□□□□□ -0.39
NOD1-202ENST00000411552 C19orf35Q6ZS72 473 aa12.6□□□□□ -0.39
NOD1-202ENST00000411552 SLC25A42Q86VD7 318 aa12.6□□□□□ -0.39
NOD1-202ENST00000411552 CADM3Q8N126 398 aa12.6□□□□□ -0.39
NOD1-202ENST00000411552 Q8N402 240 aa12.6□□□□□ -0.39
NOD1-202ENST00000411552 TRIM63Q969Q1 353 aa12.6□□□□□ -0.39
NOD1-202ENST00000411552 USMG5Q96IX5 58 aa12.6□□□□□ -0.39
NOD1-202ENST00000411552 PRRT1Q99946 306 aa12.6□□□□□ -0.39
NOD1-202ENST00000411552 COMMD5Q9GZQ3 224 aa12.6□□□□□ -0.39
NOD1-202ENST00000411552 COPZ2Q9P299 210 aa12.6□□□□□ -0.39
NOD1-202ENST00000411552 ZNF257Q9Y2Q1 563 aa12.6□□□□□ -0.39
NOD1-202ENST00000411552 TRBV9A0A0B4J1U6 114 aa12.59□□□□□ -0.39
NOD1-202ENST00000411552 NPIPB5A8MRT5 1133 aa12.59□□□□□ -0.39
NOD1-202ENST00000411552 H0Y980 276 aa12.59□□□□□ -0.39
NOD1-202ENST00000411552 HSPB1P04792 205 aaKnown RBP12.59□□□□□ -0.39
NOD1-202ENST00000411552 SERPINE2P07093 398 aa12.59□□□□□ -0.39
NOD1-202ENST00000411552 CTSDP07339 412 aaPredicted RBP12.59□□□□□ -0.39
NOD1-202ENST00000411552 ECI1P42126 302 aa12.59□□□□□ -0.39
NOD1-202ENST00000411552 SLURP1P55000 103 aa12.59□□□□□ -0.39
NOD1-202ENST00000411552 RHOGP84095 191 aa12.59□□□□□ -0.39
NOD1-202ENST00000411552 OR6Q1Q8NGQ2 317 aa12.59□□□□□ -0.39
NOD1-202ENST00000411552 SEC22AQ96IW7 307 aa12.59□□□□□ -0.39
NOD1-202ENST00000411552 TP53RKQ96S44 253 aa12.59□□□□□ -0.39
NOD1-202ENST00000411552 GPR61Q9BZJ8 451 aa12.59□□□□□ -0.39
NOD1-202ENST00000411552 AKIP1Q9NQ31 210 aa12.59□□□□□ -0.39
NOD1-202ENST00000411552 SLC2A8Q9NY64 477 aa12.59□□□□□ -0.39
NOD1-202ENST00000411552 NSG2Q9Y328 171 aa12.59□□□□□ -0.39
NOD1-202ENST00000411552 C3orf85A0A1B0GTC6 90 aa12.58□□□□□ -0.4
NOD1-202ENST00000411552 IGLC7A0M8Q6 106 aa12.58□□□□□ -0.4
NOD1-202ENST00000411552 ANKRD34BA5PLL1 514 aa12.58□□□□□ -0.4
NOD1-202ENST00000411552 FAM223BA6NKX1 122 aa12.58□□□□□ -0.4
NOD1-202ENST00000411552 REG1AP05451 166 aa12.58□□□□□ -0.4
NOD1-202ENST00000411552 CRYGCP07315 174 aa12.58□□□□□ -0.4
NOD1-202ENST00000411552 PSMB6P28072 239 aa12.58□□□□□ -0.4
NOD1-202ENST00000411552 HOXD3P31249 432 aaPredicted RBP12.58□□□□□ -0.4
NOD1-202ENST00000411552 ETV6P41212 452 aa12.58□□□□□ -0.4
NOD1-202ENST00000411552 KLF9Q13886 244 aaPredicted RBP12.58□□□□□ -0.4
NOD1-202ENST00000411552 SURF2Q15527 256 aaPredicted RBP12.58□□□□□ -0.4
NOD1-202ENST00000411552 PDLIM3Q53GG5 364 aaPredicted RBP12.58□□□□□ -0.4
NOD1-202ENST00000411552 SPANXN2Q5MJ10 180 aa12.58□□□□□ -0.4
NOD1-202ENST00000411552 ZNF343Q6P1L6 599 aa12.58□□□□□ -0.4
NOD1-202ENST00000411552 FAM223AQ8IWN6 122 aa12.58□□□□□ -0.4
NOD1-202ENST00000411552 CCDC71LQ8N9Z2 235 aa12.58□□□□□ -0.4
NOD1-202ENST00000411552 DCUN1D4Q92564 292 aa12.58□□□□□ -0.4
NOD1-202ENST00000411552 DLX4Q92988 240 aaPredicted RBP12.58□□□□□ -0.4
NOD1-202ENST00000411552 RTBDNQ9BSG5 229 aaPredicted RBP12.58□□□□□ -0.4
NOD1-202ENST00000411552 QTRT1Q9BXR0 403 aaKnown RBP12.58□□□□□ -0.4
NOD1-202ENST00000411552 MCUBQ9NWR8 336 aa12.58□□□□□ -0.4
NOD1-202ENST00000411552 C14orf166Q9Y224 244 aaKnown RBP12.58□□□□□ -0.4
NOD1-202ENST00000411552 TEX50A0A1B0GTY4 177 aa12.57□□□□□ -0.4
NOD1-202ENST00000411552 SEC14L6B5MCN3 397 aa12.57□□□□□ -0.4
NOD1-202ENST00000411552 SNAPC5O75971 98 aa12.57□□□□□ -0.4
NOD1-202ENST00000411552 CTRB1P17538 263 aa12.57□□□□□ -0.4
NOD1-202ENST00000411552 KRTAP10-11P60412 298 aa12.57□□□□□ -0.4
NOD1-202ENST00000411552 EGFEM1PQ0D2K5 195 aa12.57□□□□□ -0.4
NOD1-202ENST00000411552 SP6Q3SY56 376 aa12.57□□□□□ -0.4
NOD1-202ENST00000411552 CTRB2Q6GPI1 263 aa12.57□□□□□ -0.4
NOD1-202ENST00000411552 H2BFWTQ7Z2G1 175 aa12.57□□□□□ -0.4
NOD1-202ENST00000411552 NECAP1Q8NC96 275 aa12.57□□□□□ -0.4
NOD1-202ENST00000411552 OR10W1Q8NGF6 305 aa12.57□□□□□ -0.4
NOD1-202ENST00000411552 OR1L8Q8NGR8 309 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms