RNA–Protein interactions for RNA: ENST00000410054.5

R3HDM1-204, Transcript of R3H domain containing 1, humanhuman

TSL 2 BASIC

Gene R3HDM1, Length 4,442 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-204ENST00000410054 ZFHX3Q15911 3703 aa4.43□□□□□ -1.7
R3HDM1-204ENST00000410054 TRAV41A0A0B4J266 112 aa4.43□□□□□ -1.7
R3HDM1-204ENST00000410054 TRAV21A0A0B4J279 112 aa4.43□□□□□ -1.7
R3HDM1-204ENST00000410054 IGLC7A0M8Q6 106 aa4.43□□□□□ -1.7
R3HDM1-204ENST00000410054 UPK1AO00322 258 aa4.43□□□□□ -1.7
R3HDM1-204ENST00000410054 FGF3P11487 239 aaPredicted RBP4.43□□□□□ -1.7
R3HDM1-204ENST00000410054 SSBP1Q04837 148 aaKnown RBP4.43□□□□□ -1.7
R3HDM1-204ENST00000410054 TMEM170BQ5T4T1 132 aa4.43□□□□□ -1.7
R3HDM1-204ENST00000410054 ASPHD1Q5U4P2 390 aa4.43□□□□□ -1.7
R3HDM1-204ENST00000410054 C1QL3Q5VWW1 255 aa4.43□□□□□ -1.7
R3HDM1-204ENST00000410054 FAM166AQ6J272 317 aa4.43□□□□□ -1.7
R3HDM1-204ENST00000410054 C2orf82Q6UX34 121 aa4.43□□□□□ -1.7
R3HDM1-204ENST00000410054 PDPNQ86YL7 162 aa4.43□□□□□ -1.7
R3HDM1-204ENST00000410054 BCL6BQ8N143 479 aaPredicted RBP4.43□□□□□ -1.7
R3HDM1-204ENST00000410054 C10orf105Q8TEF2 133 aa4.43□□□□□ -1.7
R3HDM1-204ENST00000410054 ABHD14BQ96IU4 210 aa4.43□□□□□ -1.7
R3HDM1-204ENST00000410054 NPVFQ9HCQ7 196 aa4.43□□□□□ -1.7
R3HDM1-204ENST00000410054 M0R1B8 84 aa4.43□□□□□ -1.7
R3HDM1-204ENST00000410054 FUSP35637 526 aaKnown RBP eCLIP4.43□□□□□ -1.7
R3HDM1-204ENST00000410054 Q499Y3 187 aa4.43□□□□□ -1.7
R3HDM1-204ENST00000410054 AAED1Q7RTV5 226 aa4.43□□□□□ -1.7
R3HDM1-204ENST00000410054 ZAR1Q86SH2 424 aa4.43□□□□□ -1.7
R3HDM1-204ENST00000410054 BMFQ96LC9 184 aa4.43□□□□□ -1.7
R3HDM1-204ENST00000410054 WSB2Q9NYS7 404 aaPredicted RBP4.43□□□□□ -1.7
R3HDM1-204ENST00000410054 FGF16O43320 207 aa4.43□□□□□ -1.7
R3HDM1-204ENST00000410054 UNGP13051 313 aaPredicted RBP4.43□□□□□ -1.7
R3HDM1-204ENST00000410054 CD33P20138 364 aa4.43□□□□□ -1.7
R3HDM1-204ENST00000410054 Q6Q795 121 aa4.43□□□□□ -1.7
R3HDM1-204ENST00000410054 MZB1Q8WU39 189 aa4.43□□□□□ -1.7
R3HDM1-204ENST00000410054 AICDAQ9GZX7 198 aa4.43□□□□□ -1.7
R3HDM1-204ENST00000410054 H3BMM0 161 aa4.42□□□□□ -1.7
R3HDM1-204ENST00000410054 OVOL1O14753 267 aa4.42□□□□□ -1.7
R3HDM1-204ENST00000410054 TIMM17BO60830 172 aa4.42□□□□□ -1.7
R3HDM1-204ENST00000410054 ZNF138P52744 262 aa4.42□□□□□ -1.7
R3HDM1-204ENST00000410054 NANOS2P60321 138 aaKnown RBP4.42□□□□□ -1.7
R3HDM1-204ENST00000410054 PSG7Q13046 419 aa4.42□□□□□ -1.7
R3HDM1-204ENST00000410054 CD226Q15762 336 aa4.42□□□□□ -1.7
R3HDM1-204ENST00000410054 ZNF793Q6ZN11 406 aa4.42□□□□□ -1.7
R3HDM1-204ENST00000410054 TIFABQ6ZNK6 161 aa4.42□□□□□ -1.7
R3HDM1-204ENST00000410054 UBE2WQ96B02 151 aa4.42□□□□□ -1.7
R3HDM1-204ENST00000410054 CHCHD1Q96BP2 118 aaKnown RBP4.42□□□□□ -1.7
R3HDM1-204ENST00000410054 LIME1Q9H400 295 aa4.42□□□□□ -1.7
R3HDM1-204ENST00000410054 RGPD8O14715 1765 aaPredicted RBP4.42□□□□□ -1.7
R3HDM1-204ENST00000410054 SLIT1O75093 1534 aa4.42□□□□□ -1.7
R3HDM1-204ENST00000410054 TRGV11A0A075B6L2 103 aa4.42□□□□□ -1.7
R3HDM1-204ENST00000410054 A0A1B0GX78 115 aa4.42□□□□□ -1.7
R3HDM1-204ENST00000410054 YPEL1O60688 119 aa4.42□□□□□ -1.7
R3HDM1-204ENST00000410054 C1QL1O75973 258 aa4.42□□□□□ -1.7
R3HDM1-204ENST00000410054 MT-ATP8P03928 68 aa4.42□□□□□ -1.7
R3HDM1-204ENST00000410054 LOXL3P58215 753 aa4.42□□□□□ -1.7
R3HDM1-204ENST00000410054 FXYD4P59646 89 aa4.42□□□□□ -1.7
R3HDM1-204ENST00000410054 WDR5P61964 334 aaKnown RBP4.42□□□□□ -1.7
R3HDM1-204ENST00000410054 TCF15Q12870 199 aa4.42□□□□□ -1.7
R3HDM1-204ENST00000410054 FOXF2Q12947 444 aa4.42□□□□□ -1.7
R3HDM1-204ENST00000410054 BVES-AS1Q5T3Y7 98 aa4.42□□□□□ -1.7
R3HDM1-204ENST00000410054 KDM4DQ6B0I6 523 aa4.42□□□□□ -1.7
R3HDM1-204ENST00000410054 CLEC19AQ6UXS0 136 aa4.42□□□□□ -1.7
R3HDM1-204ENST00000410054 TDHQ8IZJ6 230 aa4.42□□□□□ -1.7
R3HDM1-204ENST00000410054 MPLKIPQ8TAP9 179 aa4.42□□□□□ -1.7
R3HDM1-204ENST00000410054 RND1Q92730 232 aa4.42□□□□□ -1.7
R3HDM1-204ENST00000410054 PHRF1Q9P1Y6 1649 aaKnown RBP4.42□□□□□ -1.7
R3HDM1-204ENST00000410054 KDM3BQ7LBC6 1761 aa4.42□□□□□ -1.7
R3HDM1-204ENST00000410054 ARHGAP23Q9P227 1491 aa4.42□□□□□ -1.7
R3HDM1-204ENST00000410054 TSPOAP1O95153 1857 aa4.42□□□□□ -1.7
R3HDM1-204ENST00000410054 A0A087WV48 116 aa4.42□□□□□ -1.7
R3HDM1-204ENST00000410054 FAM90A7PA6NKC0 464 aa4.42□□□□□ -1.7
R3HDM1-204ENST00000410054 FAM90A22PA8MWA6 464 aa4.42□□□□□ -1.7
R3HDM1-204ENST00000410054 FAM90A12PA8MX19 464 aa4.42□□□□□ -1.7
R3HDM1-204ENST00000410054 FAM90A23PA8MXZ1 464 aa4.42□□□□□ -1.7
R3HDM1-204ENST00000410054 LGALS2P05162 132 aa4.42□□□□□ -1.7
R3HDM1-204ENST00000410054 LGALS1P09382 135 aaKnown RBP4.42□□□□□ -1.7
R3HDM1-204ENST00000410054 ZNF134P52741 427 aa4.42□□□□□ -1.7
R3HDM1-204ENST00000410054 ERVK11-1P61568 191 aa4.42□□□□□ -1.7
R3HDM1-204ENST00000410054 ZNF493Q6ZR52 646 aa4.42□□□□□ -1.7
R3HDM1-204ENST00000410054 CYP2G1PQ6ZSU1 146 aa4.42□□□□□ -1.7
R3HDM1-204ENST00000410054 SH2D6Q7Z4S9 175 aa4.42□□□□□ -1.7
R3HDM1-204ENST00000410054 OSR1Q8TAX0 266 aaPredicted RBP4.42□□□□□ -1.7
R3HDM1-204ENST00000410054 IL23AQ9NPF7 189 aa4.42□□□□□ -1.7
R3HDM1-204ENST00000410054 MRPL27Q9P0M9 148 aaKnown RBP4.42□□□□□ -1.7
R3HDM1-204ENST00000410054 REV3LO60673 3130 aa4.41□□□□□ -1.7
R3HDM1-204ENST00000410054 TCRAP04437 139 aa4.41□□□□□ -1.7
R3HDM1-204ENST00000410054 CECR9P0C854 216 aa4.41□□□□□ -1.7
R3HDM1-204ENST00000410054 MNX1P50219 401 aaPredicted RBP4.41□□□□□ -1.7
R3HDM1-204ENST00000410054 EFNA5P52803 228 aa4.41□□□□□ -1.7
R3HDM1-204ENST00000410054 FGF13Q92913 245 aa4.41□□□□□ -1.7
R3HDM1-204ENST00000410054 YPEL4Q96NS1 127 aa4.41□□□□□ -1.7
R3HDM1-204ENST00000410054 YPEL2Q96QA6 119 aa4.41□□□□□ -1.7
R3HDM1-204ENST00000410054 RIC1Q4ADV7 1423 aa4.41□□□□□ -1.7
R3HDM1-204ENST00000410054 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.41□□□□□ -1.7
R3HDM1-204ENST00000410054 CXorf49A8MYA2 514 aaPredicted RBP4.41□□□□□ -1.7
R3HDM1-204ENST00000410054 FAM72CH0Y354 149 aa4.41□□□□□ -1.7
R3HDM1-204ENST00000410054 EDIL3O43854 480 aa4.41□□□□□ -1.7
R3HDM1-204ENST00000410054 CELA3BP08861 270 aa4.41□□□□□ -1.7
R3HDM1-204ENST00000410054 ZNF823P16415 610 aa4.41□□□□□ -1.7
R3HDM1-204ENST00000410054 TIMM10P62072 90 aa4.41□□□□□ -1.7
R3HDM1-204ENST00000410054 FOXI1Q12951 378 aa4.41□□□□□ -1.7
R3HDM1-204ENST00000410054 RUNX3Q13761 415 aa4.41□□□□□ -1.7
R3HDM1-204ENST00000410054 FAM72DQ6L9T8 149 aa4.41□□□□□ -1.7
R3HDM1-204ENST00000410054 EBLN2Q6P2I7 272 aa4.41□□□□□ -1.7
R3HDM1-204ENST00000410054 RASL10BQ96S79 203 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms