RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 SLC6A1P30531 599 aa17.39■□□□□ 0.37
PTCD3-203ENST00000409783 RPL27AP46776 148 aaKnown RBP17.39■□□□□ 0.37
PTCD3-203ENST00000409783 TMEM65Q6PI78 240 aa17.39■□□□□ 0.37
PTCD3-203ENST00000409783 TMEM230Q96A57 120 aa17.39■□□□□ 0.37
PTCD3-203ENST00000409783 UBE2E2Q96LR5 201 aa17.39■□□□□ 0.37
PTCD3-203ENST00000409783 SPIN2AQ99865 258 aa17.39■□□□□ 0.37
PTCD3-203ENST00000409783 SPIN2BQ9BPZ2 258 aa17.39■□□□□ 0.37
PTCD3-203ENST00000409783 BRI3O95415 125 aa17.38■□□□□ 0.37
PTCD3-203ENST00000409783 OR9G9P0C7N8 305 aa17.38■□□□□ 0.37
PTCD3-203ENST00000409783 UCP1P25874 307 aa17.38■□□□□ 0.37
PTCD3-203ENST00000409783 ERVK-16P61578 105 aa17.38■□□□□ 0.37
PTCD3-203ENST00000409783 SP6Q3SY56 376 aa17.38■□□□□ 0.37
PTCD3-203ENST00000409783 ZNF57Q68EA5 555 aaPredicted RBP17.38■□□□□ 0.37
PTCD3-203ENST00000409783 ADAD2Q8NCV1 583 aaKnown RBP17.38■□□□□ 0.37
PTCD3-203ENST00000409783 PHB2Q99623 299 aa17.38■□□□□ 0.37
PTCD3-203ENST00000409783 GNB4Q9HAV0 340 aa17.38■□□□□ 0.37
PTCD3-203ENST00000409783 PTTG2Q9NZH5 202 aa17.38■□□□□ 0.37
PTCD3-203ENST00000409783 HMX3A6NHT5 357 aa17.37■□□□□ 0.37
PTCD3-203ENST00000409783 CRYM-AS1A6NIL9 109 aa17.37■□□□□ 0.37
PTCD3-203ENST00000409783 NUDT19A8MXV4 375 aa17.37■□□□□ 0.37
PTCD3-203ENST00000409783 H3BUA1 57 aa17.37■□□□□ 0.37
PTCD3-203ENST00000409783 SERPINE2P07093 398 aa17.37■□□□□ 0.37
PTCD3-203ENST00000409783 IL7P13232 177 aa17.37■□□□□ 0.37
PTCD3-203ENST00000409783 OR2B8PP59922 312 aa17.37■□□□□ 0.37
PTCD3-203ENST00000409783 TRIQKQ629K1 86 aa17.37■□□□□ 0.37
PTCD3-203ENST00000409783 C4orf3Q8WVX3 66 aa17.37■□□□□ 0.37
PTCD3-203ENST00000409783 MS4A10Q96PG2 267 aa17.37■□□□□ 0.37
PTCD3-203ENST00000409783 SLA2Q9H6Q3 261 aa17.37■□□□□ 0.37
PTCD3-203ENST00000409783 NAA60Q9H7X0 242 aa17.37■□□□□ 0.37
PTCD3-203ENST00000409783 I3L521 148 aa17.36■□□□□ 0.37
PTCD3-203ENST00000409783 B3GALNT1O75752 331 aa17.36■□□□□ 0.37
PTCD3-203ENST00000409783 TTC9CQ8N5M4 171 aa17.36■□□□□ 0.37
PTCD3-203ENST00000409783 GLYATL2Q8WU03 294 aa17.36■□□□□ 0.37
PTCD3-203ENST00000409783 RAX2Q96IS3 184 aa17.36■□□□□ 0.37
PTCD3-203ENST00000409783 SCGB3A2Q96PL1 93 aa17.36■□□□□ 0.37
PTCD3-203ENST00000409783 P2RX4Q99571 388 aa17.36■□□□□ 0.37
PTCD3-203ENST00000409783 RBMXL2O75526 392 aaKnown RBP17.35■□□□□ 0.37
PTCD3-203ENST00000409783 IGKV1-5P01602 117 aa17.35■□□□□ 0.37
PTCD3-203ENST00000409783 OR5AC1P0C628 307 aa17.35■□□□□ 0.37
PTCD3-203ENST00000409783 P0C879 139 aa17.35■□□□□ 0.37
PTCD3-203ENST00000409783 RUNX1Q01196 453 aa17.35■□□□□ 0.37
PTCD3-203ENST00000409783 DEFB136Q30KP8 78 aa17.35■□□□□ 0.37
PTCD3-203ENST00000409783 WFDC9Q8NEX5 89 aa17.35■□□□□ 0.37
PTCD3-203ENST00000409783 FYTTD1Q96QD9 318 aaKnown RBP17.35■□□□□ 0.37
PTCD3-203ENST00000409783 TMEM222Q9H0R3 208 aa17.35■□□□□ 0.37
PTCD3-203ENST00000409783 NSG2Q9Y328 171 aa17.35■□□□□ 0.37
PTCD3-203ENST00000409783 TEX50A0A1B0GTY4 177 aa17.34■□□□□ 0.37
PTCD3-203ENST00000409783 DBX1A6NMT0 343 aa17.34■□□□□ 0.37
PTCD3-203ENST00000409783 TRGV3P03979 118 aa17.34■□□□□ 0.37
PTCD3-203ENST00000409783 MYCNOSP40205 109 aa17.34■□□□□ 0.37
PTCD3-203ENST00000409783 TPPP2P59282 170 aa17.34■□□□□ 0.37
PTCD3-203ENST00000409783 LHFPL5Q8TAF8 219 aa17.34■□□□□ 0.37
PTCD3-203ENST00000409783 DUX3Q96PT4 197 aa17.34■□□□□ 0.37
PTCD3-203ENST00000409783 TEX13DA0A0J9YY54 714 aaPredicted RBP17.33■□□□□ 0.36
PTCD3-203ENST00000409783 CDS2O95674 445 aa17.33■□□□□ 0.36
PTCD3-203ENST00000409783 PF4P02776 101 aa17.33■□□□□ 0.36
PTCD3-203ENST00000409783 AREGP15514 252 aa17.33■□□□□ 0.36
PTCD3-203ENST00000409783 CD40LGP29965 261 aa17.33■□□□□ 0.36
PTCD3-203ENST00000409783 SUPT4H1P63272 117 aaKnown RBP17.33■□□□□ 0.36
PTCD3-203ENST00000409783 MRPL41Q8IXM3 137 aaKnown RBP17.33■□□□□ 0.36
PTCD3-203ENST00000409783 LINC00482Q8N8I6 264 aa17.33■□□□□ 0.36
PTCD3-203ENST00000409783 GALNT14Q96FL9 552 aa17.33■□□□□ 0.36
PTCD3-203ENST00000409783 SLC25A21Q9BQT8 299 aaPredicted RBP17.33■□□□□ 0.36
PTCD3-203ENST00000409783 COMMD5Q9GZQ3 224 aa17.33■□□□□ 0.36
PTCD3-203ENST00000409783 ZNF355PQ9NSJ1 428 aa17.33■□□□□ 0.36
PTCD3-203ENST00000409783 TMEM14BQ9NUH8 114 aa17.33■□□□□ 0.36
PTCD3-203ENST00000409783 COA4Q9NYJ1 87 aa17.33■□□□□ 0.36
PTCD3-203ENST00000409783 IGLC7A0M8Q6 106 aa17.32■□□□□ 0.36
PTCD3-203ENST00000409783 NAP1L6A6NFF2 107 aa17.32■□□□□ 0.36
PTCD3-203ENST00000409783 C15orf61A6NNL5 157 aa17.32■□□□□ 0.36
PTCD3-203ENST00000409783 NPIPB5A8MRT5 1133 aa17.32■□□□□ 0.36
PTCD3-203ENST00000409783 CCL24O00175 119 aa17.32■□□□□ 0.36
PTCD3-203ENST00000409783 CRYGCP07315 174 aa17.32■□□□□ 0.36
PTCD3-203ENST00000409783 BTCP35070 178 aa17.32■□□□□ 0.36
PTCD3-203ENST00000409783 INPP1P49441 399 aa17.32■□□□□ 0.36
PTCD3-203ENST00000409783 FHL3Q13643 280 aa17.32■□□□□ 0.36
PTCD3-203ENST00000409783 IZUMO4Q1ZYL8 232 aa17.32■□□□□ 0.36
PTCD3-203ENST00000409783 C19orf35Q6ZS72 473 aa17.32■□□□□ 0.36
PTCD3-203ENST00000409783 H2BFWTQ7Z2G1 175 aa17.32■□□□□ 0.36
PTCD3-203ENST00000409783 OR5B12Q96R08 314 aa17.32■□□□□ 0.36
PTCD3-203ENST00000409783 TSC22D3Q99576 134 aa17.32■□□□□ 0.36
PTCD3-203ENST00000409783 NDUFA4L2Q9NRX3 87 aa17.32■□□□□ 0.36
PTCD3-203ENST00000409783 PRNDQ9UKY0 176 aa17.32■□□□□ 0.36
PTCD3-203ENST00000409783 NOTCH3Q9UM47 2321 aa17.31■□□□□ 0.36
PTCD3-203ENST00000409783 TRBV9A0A0B4J1U6 114 aa17.31■□□□□ 0.36
PTCD3-203ENST00000409783 A0A0G2JRQ6 117 aa17.31■□□□□ 0.36
PTCD3-203ENST00000409783 LINC00854A0A1B0GVQ3 168 aa17.31■□□□□ 0.36
PTCD3-203ENST00000409783 PLA2G10O15496 165 aa17.31■□□□□ 0.36
PTCD3-203ENST00000409783 SNAPC5O75971 98 aa17.31■□□□□ 0.36
PTCD3-203ENST00000409783 PRH1P02810 166 aa17.31■□□□□ 0.36
PTCD3-203ENST00000409783 CTRB1P17538 263 aa17.31■□□□□ 0.36
PTCD3-203ENST00000409783 CCR6P51684 374 aa17.31■□□□□ 0.36
PTCD3-203ENST00000409783 DEFA5Q01523 94 aa17.31■□□□□ 0.36
PTCD3-203ENST00000409783 DHODHQ02127 395 aa17.31■□□□□ 0.36
PTCD3-203ENST00000409783 KLK9Q2XQG4 91 aa17.31■□□□□ 0.36
PTCD3-203ENST00000409783 TRIM16LQ309B1 348 aa17.31■□□□□ 0.36
PTCD3-203ENST00000409783 CTRB2Q6GPI1 263 aa17.31■□□□□ 0.36
PTCD3-203ENST00000409783 SGPP2Q8IWX5 399 aa17.31■□□□□ 0.36
PTCD3-203ENST00000409783 OR1L8Q8NGR8 309 aa17.31■□□□□ 0.36
PTCD3-203ENST00000409783 S100ZQ8WXG8 99 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms