RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 NPIPB3Q92617 1050 aa9.4□□□□□ -0.9
SNX13-202ENST00000409604 BBC3Q96PG8 261 aaPredicted RBP9.4□□□□□ -0.9
SNX13-202ENST00000409604 U3KQ87 197 aa9.4□□□□□ -0.9
SNX13-202ENST00000409604 IGKV1-6A0A0C4DH72 117 aa9.4□□□□□ -0.91
SNX13-202ENST00000409604 A0A1B0GU03 582 aa9.4□□□□□ -0.91
SNX13-202ENST00000409604 E9PQ18 207 aa9.4□□□□□ -0.91
SNX13-202ENST00000409604 IGHV1-8P0DP01 117 aa9.4□□□□□ -0.91
SNX13-202ENST00000409604 MIC13Q5XKP0 118 aa9.4□□□□□ -0.91
SNX13-202ENST00000409604 ZNF843Q8N446 348 aa9.4□□□□□ -0.91
SNX13-202ENST00000409604 SSX3Q99909 188 aa9.4□□□□□ -0.91
SNX13-202ENST00000409604 ZNF107Q9UII5 783 aaPredicted RBP9.4□□□□□ -0.91
SNX13-202ENST00000409604 IGHV2-26A0A0B4J1V2 119 aa9.39□□□□□ -0.91
SNX13-202ENST00000409604 H3BUX3 64 aa9.39□□□□□ -0.91
SNX13-202ENST00000409604 ZNF735P0CB33 412 aa9.39□□□□□ -0.91
SNX13-202ENST00000409604 NPBWR1P48145 328 aa9.39□□□□□ -0.91
SNX13-202ENST00000409604 B2MP61769 119 aa9.39□□□□□ -0.91
SNX13-202ENST00000409604 TUSC1Q2TAM9 212 aa9.39□□□□□ -0.91
SNX13-202ENST00000409604 RBM14Q96PK6 669 aaKnown RBP9.39□□□□□ -0.91
SNX13-202ENST00000409604 CFDP00746 253 aaPredicted RBP9.39□□□□□ -0.91
SNX13-202ENST00000409604 CD8AP01732 235 aa9.39□□□□□ -0.91
SNX13-202ENST00000409604 IGKV1-16P04430 117 aa9.39□□□□□ -0.91
SNX13-202ENST00000409604 SAA1P0DJI8 122 aaPredicted RBP9.39□□□□□ -0.91
SNX13-202ENST00000409604 ATP6V0CP27449 155 aa9.39□□□□□ -0.91
SNX13-202ENST00000409604 DMRTC2Q8IXT2 367 aaPredicted RBP9.39□□□□□ -0.91
SNX13-202ENST00000409604 OR4C12Q96R67 309 aa9.39□□□□□ -0.91
SNX13-202ENST00000409604 TMEM147Q9BVK8 224 aa9.39□□□□□ -0.91
SNX13-202ENST00000409604 LINC00473A8K010 186 aa9.39□□□□□ -0.91
SNX13-202ENST00000409604 HSPE1P61604 102 aaKnown RBP9.39□□□□□ -0.91
SNX13-202ENST00000409604 TNFRSF9Q07011 255 aa9.39□□□□□ -0.91
SNX13-202ENST00000409604 TMEM88Q6PEY1 159 aa9.39□□□□□ -0.91
SNX13-202ENST00000409604 MMD2Q8IY49 270 aa9.39□□□□□ -0.91
SNX13-202ENST00000409604 BPIFCQ8NFQ6 507 aa9.39□□□□□ -0.91
SNX13-202ENST00000409604 SUN5Q8TC36 379 aa9.39□□□□□ -0.91
SNX13-202ENST00000409604 MARC2Q969Z3 335 aa9.39□□□□□ -0.91
SNX13-202ENST00000409604 LINC00052Q96N35 136 aa9.39□□□□□ -0.91
SNX13-202ENST00000409604 BEX4Q9NWD9 120 aaPredicted RBP9.39□□□□□ -0.91
SNX13-202ENST00000409604 NAPSAO96009 420 aa9.38□□□□□ -0.91
SNX13-202ENST00000409604 CXorf58Q96LI9 332 aa9.38□□□□□ -0.91
SNX13-202ENST00000409604 SH3BGRL3Q9H299 93 aa9.38□□□□□ -0.91
SNX13-202ENST00000409604 IGLV3-9A0A075B6K5 115 aa9.38□□□□□ -0.91
SNX13-202ENST00000409604 MAP1LC3B2A6NCE7 125 aa9.38□□□□□ -0.91
SNX13-202ENST00000409604 PCP4L1A6NKN8 68 aa9.38□□□□□ -0.91
SNX13-202ENST00000409604 TAAR5O14804 337 aa9.38□□□□□ -0.91
SNX13-202ENST00000409604 CCDC28AQ8IWP9 274 aa9.38□□□□□ -0.91
SNX13-202ENST00000409604 OR2T10Q8NGZ9 312 aa9.38□□□□□ -0.91
SNX13-202ENST00000409604 UHRF2Q96PU4 802 aa9.38□□□□□ -0.91
SNX13-202ENST00000409604 MAP1LC3BQ9GZQ8 125 aa9.38□□□□□ -0.91
SNX13-202ENST00000409604 ALX4Q9H161 411 aaPredicted RBP9.38□□□□□ -0.91
SNX13-202ENST00000409604 TIMM9Q9Y5J7 89 aa9.38□□□□□ -0.91
SNX13-202ENST00000409604 USP24Q9UPU5 2620 aa9.38□□□□□ -0.91
SNX13-202ENST00000409604 WIPF3A6NGB9 483 aa9.38□□□□□ -0.91
SNX13-202ENST00000409604 ZNF727A8MUV8 499 aa9.38□□□□□ -0.91
SNX13-202ENST00000409604 DNASE2O00115 360 aaPredicted RBP9.38□□□□□ -0.91
SNX13-202ENST00000409604 SULT1A1P50225 295 aa9.38□□□□□ -0.91
SNX13-202ENST00000409604 UBE2G1P62253 170 aa9.38□□□□□ -0.91
SNX13-202ENST00000409604 MEF2CQ06413 473 aaPredicted RBP9.38□□□□□ -0.91
SNX13-202ENST00000409604 PSG5Q15238 335 aa9.38□□□□□ -0.91
SNX13-202ENST00000409604 PCSK4Q6UW60 755 aa9.38□□□□□ -0.91
SNX13-202ENST00000409604 C9orf62Q8N4C0 152 aa9.38□□□□□ -0.91
SNX13-202ENST00000409604 LHFPL5Q8TAF8 219 aa9.38□□□□□ -0.91
SNX13-202ENST00000409604 CFAP47Q6ZTR5 3102 aa9.38□□□□□ -0.91
SNX13-202ENST00000409604 RPS10-NUDT3A0A1W2PQS6 291 aa9.37□□□□□ -0.91
SNX13-202ENST00000409604 RANP62826 216 aaKnown RBP9.37□□□□□ -0.91
SNX13-202ENST00000409604 M0QZ24 198 aa9.37□□□□□ -0.91
SNX13-202ENST00000409604 CA2P00918 260 aa9.37□□□□□ -0.91
SNX13-202ENST00000409604 HBE1P02100 147 aa9.37□□□□□ -0.91
SNX13-202ENST00000409604 CD1BP29016 333 aa9.37□□□□□ -0.91
SNX13-202ENST00000409604 DHRS11Q6UWP2 260 aa9.37□□□□□ -0.91
SNX13-202ENST00000409604 NTNG2Q96CW9 530 aa9.37□□□□□ -0.91
SNX13-202ENST00000409604 IGHV4-30-2A0A087WSY4 118 aa9.37□□□□□ -0.91
SNX13-202ENST00000409604 IGKV3-20P01619 116 aa9.37□□□□□ -0.91
SNX13-202ENST00000409604 MPZP25189 248 aa9.37□□□□□ -0.91
SNX13-202ENST00000409604 DUTP33316 252 aaKnown RBP9.37□□□□□ -0.91
SNX13-202ENST00000409604 DVL1P1P54792 670 aaPredicted RBP9.37□□□□□ -0.91
SNX13-202ENST00000409604 TPPP2P59282 170 aa9.37□□□□□ -0.91
SNX13-202ENST00000409604 BPIFB3P59826 476 aa9.37□□□□□ -0.91
SNX13-202ENST00000409604 UBE2L3P68036 154 aaKnown RBP9.37□□□□□ -0.91
SNX13-202ENST00000409604 HEPN1Q6WQI6 88 aa9.37□□□□□ -0.91
SNX13-202ENST00000409604 NANPQ8TBE9 248 aa9.37□□□□□ -0.91
SNX13-202ENST00000409604 CTSZQ9UBR2 303 aa9.37□□□□□ -0.91
SNX13-202ENST00000409604 TRIM77I1YAP6 450 aa9.37□□□□□ -0.91
SNX13-202ENST00000409604 SAA4P35542 130 aa9.37□□□□□ -0.91
SNX13-202ENST00000409604 CDC34P49427 236 aaPredicted RBP9.37□□□□□ -0.91
SNX13-202ENST00000409604 ZNF137PP52743 207 aa9.37□□□□□ -0.91
SNX13-202ENST00000409604 FLI1Q01543 452 aaPredicted RBP9.37□□□□□ -0.91
SNX13-202ENST00000409604 C11orf53Q8IXP5 236 aa9.37□□□□□ -0.91
SNX13-202ENST00000409604 OR1L4Q8NGR5 311 aa9.37□□□□□ -0.91
SNX13-202ENST00000409604 CORO2AQ92828 525 aa9.37□□□□□ -0.91
SNX13-202ENST00000409604 NAGKQ9UJ70 344 aa9.37□□□□□ -0.91
SNX13-202ENST00000409604 RFNGQ9Y644 331 aa9.37□□□□□ -0.91
SNX13-202ENST00000409604 IGHV4-61A0A0C4DH41 118 aa9.36□□□□□ -0.91
SNX13-202ENST00000409604 FABP1P07148 127 aa9.36□□□□□ -0.91
SNX13-202ENST00000409604 S100PP25815 95 aa9.36□□□□□ -0.91
SNX13-202ENST00000409604 RHEBQ15382 184 aa9.36□□□□□ -0.91
SNX13-202ENST00000409604 LDLRAD3Q86YD5 345 aa9.36□□□□□ -0.91
SNX13-202ENST00000409604 GBGT1Q8N5D6 347 aa9.36□□□□□ -0.91
SNX13-202ENST00000409604 C22orf46C9J442 243 aa9.36□□□□□ -0.91
SNX13-202ENST00000409604 SPCS3P61009 180 aa9.36□□□□□ -0.91
SNX13-202ENST00000409604 RHOBP62745 196 aa9.36□□□□□ -0.91
SNX13-202ENST00000409604 SSX7Q7RTT5 188 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms