RNA–Protein interactions for RNA: ENST00000400075.3

GABPA-202, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 4,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-202ENST00000400075 NLRC5Q86WI3 1866 aa12.02□□□□□ -0.49
GABPA-202ENST00000400075 C11orf94C9JXX5 98 aa12.02□□□□□ -0.49
GABPA-202ENST00000400075 UCP3P55916 312 aa12.02□□□□□ -0.49
GABPA-202ENST00000400075 FAM209BQ5JX69 171 aa12.02□□□□□ -0.49
GABPA-202ENST00000400075 FOXB2Q5VYV0 432 aa12.02□□□□□ -0.49
GABPA-202ENST00000400075 TMEM219Q86XT9 240 aa12.02□□□□□ -0.49
GABPA-202ENST00000400075 GBGT1Q8N5D6 347 aa12.02□□□□□ -0.49
GABPA-202ENST00000400075 SAV1Q9H4B6 383 aaPredicted RBP12.02□□□□□ -0.49
GABPA-202ENST00000400075 LINC00527Q9UJ94 153 aa12.02□□□□□ -0.49
GABPA-202ENST00000400075 CDC42EP3Q9UKI2 254 aa12.02□□□□□ -0.49
GABPA-202ENST00000400075 FAM215AQ9Y5M1 114 aa12.02□□□□□ -0.49
GABPA-202ENST00000400075 MANBALQ9NQG1 85 aa12.02□□□□□ -0.49
GABPA-202ENST00000400075 CTXND1A0A1B0GTU2 59 aa12.01□□□□□ -0.49
GABPA-202ENST00000400075 OOSP1A8MZH6 123 aa12.01□□□□□ -0.49
GABPA-202ENST00000400075 NPFFO15130 113 aa12.01□□□□□ -0.49
GABPA-202ENST00000400075 SPINK4O60575 86 aa12.01□□□□□ -0.49
GABPA-202ENST00000400075 SPNP16150 400 aa12.01□□□□□ -0.49
GABPA-202ENST00000400075 TMEM252Q8N6L7 170 aa12.01□□□□□ -0.49
GABPA-202ENST00000400075 DNAJC4Q9NNZ3 241 aa12.01□□□□□ -0.49
GABPA-202ENST00000400075 V9GYH0 126 aa12.01□□□□□ -0.49
GABPA-202ENST00000400075 EP400Q96L91 3159 aa12.01□□□□□ -0.49
GABPA-202ENST00000400075 SIAH2O43255 324 aa12.01□□□□□ -0.49
GABPA-202ENST00000400075 ZNF250P15622 560 aa12.01□□□□□ -0.49
GABPA-202ENST00000400075 CAMPP49913 170 aa12.01□□□□□ -0.49
GABPA-202ENST00000400075 BTN1A1Q13410 526 aa12.01□□□□□ -0.49
GABPA-202ENST00000400075 OR51G1Q8NGK1 321 aa12.01□□□□□ -0.49
GABPA-202ENST00000400075 SRSF12Q8WXF0 261 aaKnown RBP12.01□□□□□ -0.49
GABPA-202ENST00000400075 ZNF319Q9P2F9 582 aa12.01□□□□□ -0.49
GABPA-202ENST00000400075 RNASEK-C17orf49H0YIS7 233 aa12□□□□□ -0.49
GABPA-202ENST00000400075 MMP9P14780 707 aa12□□□□□ -0.49
GABPA-202ENST00000400075 HGFACQ04756 655 aa12□□□□□ -0.49
GABPA-202ENST00000400075 ZNF362Q5T0B9 420 aaPredicted RBP12□□□□□ -0.49
GABPA-202ENST00000400075 HEPN1Q6WQI6 88 aa12□□□□□ -0.49
GABPA-202ENST00000400075 SPTBN4Q9H254 2564 aa12□□□□□ -0.49
GABPA-202ENST00000400075 ZFYVE26Q68DK2 2539 aa12□□□□□ -0.49
GABPA-202ENST00000400075 TNFSF13O75888 250 aa12□□□□□ -0.49
GABPA-202ENST00000400075 HIST1H1AQ02539 215 aaPredicted RBP12□□□□□ -0.49
GABPA-202ENST00000400075 ZNF429Q86V71 674 aa12□□□□□ -0.49
GABPA-202ENST00000400075 OR10S1Q8NGN2 331 aa12□□□□□ -0.49
GABPA-202ENST00000400075 ELF5Q9UKW6 265 aaPredicted RBP12□□□□□ -0.49
GABPA-202ENST00000400075 SCGB1D1O95968 90 aa12□□□□□ -0.49
GABPA-202ENST00000400075 GPX1P07203 203 aa12□□□□□ -0.49
GABPA-202ENST00000400075 KLRD1Q13241 179 aa12□□□□□ -0.49
GABPA-202ENST00000400075 PRNTQ86SH4 94 aa12□□□□□ -0.49
GABPA-202ENST00000400075 CLDN16Q9Y5I7 305 aa12□□□□□ -0.49
GABPA-202ENST00000400075 ANAPC1Q9H1A4 1944 aa12□□□□□ -0.49
GABPA-202ENST00000400075 M0R1W7 72 aa12□□□□□ -0.49
GABPA-202ENST00000400075 LGALSLQ3ZCW2 172 aaPredicted RBP12□□□□□ -0.49
GABPA-202ENST00000400075 GTSCR1Q86UQ5 136 aa12□□□□□ -0.49
GABPA-202ENST00000400075 ZNF680Q8NEM1 530 aa12□□□□□ -0.49
GABPA-202ENST00000400075 HSBP1O75506 76 aa11.99□□□□□ -0.49
GABPA-202ENST00000400075 PQLC2Q6ZP29 291 aa11.99□□□□□ -0.49
GABPA-202ENST00000400075 SYT8Q8NBV8 401 aa11.99□□□□□ -0.49
GABPA-202ENST00000400075 NEURL2Q9BR09 285 aa11.99□□□□□ -0.49
GABPA-202ENST00000400075 REG4Q9BYZ8 158 aa11.99□□□□□ -0.49
GABPA-202ENST00000400075 FOXA2Q9Y261 457 aaPredicted RBP11.99□□□□□ -0.49
GABPA-202ENST00000400075 IGHV2-26A0A0B4J1V2 119 aa11.99□□□□□ -0.49
GABPA-202ENST00000400075 MFSD2BA6NFX1 497 aa11.99□□□□□ -0.49
GABPA-202ENST00000400075 SELENOHQ8IZQ5 122 aaKnown RBP11.99□□□□□ -0.49
GABPA-202ENST00000400075 SLC7A5P1Q8MH63 180 aa11.99□□□□□ -0.49
GABPA-202ENST00000400075 LYZL4Q96KX0 146 aa11.99□□□□□ -0.49
GABPA-202ENST00000400075 KLF2Q9Y5W3 355 aaPredicted RBP11.99□□□□□ -0.49
GABPA-202ENST00000400075 SAA2-SAA4A0A096LPE2 208 aa11.99□□□□□ -0.49
GABPA-202ENST00000400075 LILRA1O75019 489 aa11.99□□□□□ -0.49
GABPA-202ENST00000400075 SAA2P0DJI9 122 aaPredicted RBP11.99□□□□□ -0.49
GABPA-202ENST00000400075 ARTNQ5T4W7 220 aa11.99□□□□□ -0.49
GABPA-202ENST00000400075 PRSS3P2Q8NHM4 247 aa11.99□□□□□ -0.49
GABPA-202ENST00000400075 NKX6-2Q9C056 277 aaPredicted RBP11.99□□□□□ -0.49
GABPA-202ENST00000400075 WNT10AQ9GZT5 417 aa11.99□□□□□ -0.49
GABPA-202ENST00000400075 WDR81Q562E7 1941 aa11.99□□□□□ -0.49
GABPA-202ENST00000400075 LOC102723971A0A1B0GUV8 181 aa11.99□□□□□ -0.49
GABPA-202ENST00000400075 IGHV1-8P0DP01 117 aa11.99□□□□□ -0.49
GABPA-202ENST00000400075 MORN2Q502X0 79 aa11.99□□□□□ -0.49
GABPA-202ENST00000400075 MRPL30Q8TCC3 161 aaKnown RBP11.99□□□□□ -0.49
GABPA-202ENST00000400075 RGP1Q92546 391 aaPredicted RBP11.99□□□□□ -0.49
GABPA-202ENST00000400075 CEP295Q9C0D2 2601 aa11.99□□□□□ -0.49
GABPA-202ENST00000400075 IGHV3OR16-8A0A075B7F1 116 aa11.98□□□□□ -0.49
GABPA-202ENST00000400075 PGPA6NDG6 321 aa11.98□□□□□ -0.49
GABPA-202ENST00000400075 HTN3P15516 51 aa11.98□□□□□ -0.49
GABPA-202ENST00000400075 CD33P20138 364 aa11.98□□□□□ -0.49
GABPA-202ENST00000400075 SMAGPQ0VAQ4 97 aa11.98□□□□□ -0.49
GABPA-202ENST00000400075 BEX4Q9NWD9 120 aaPredicted RBP11.98□□□□□ -0.49
GABPA-202ENST00000400075 C17orf98A8MV24 154 aa11.98□□□□□ -0.49
GABPA-202ENST00000400075 PAGE4O60829 102 aa11.98□□□□□ -0.49
GABPA-202ENST00000400075 SNCGO76070 127 aa11.98□□□□□ -0.49
GABPA-202ENST00000400075 CCL1P22362 96 aa11.98□□□□□ -0.49
GABPA-202ENST00000400075 RHOGP84095 191 aa11.98□□□□□ -0.49
GABPA-202ENST00000400075 SERF2P84101 59 aa11.98□□□□□ -0.49
GABPA-202ENST00000400075 MIC13Q5XKP0 118 aa11.98□□□□□ -0.49
GABPA-202ENST00000400075 CEACAM4O75871 244 aa11.98□□□□□ -0.49
GABPA-202ENST00000400075 ZP1P60852 638 aa11.98□□□□□ -0.49
GABPA-202ENST00000400075 PSG9Q00887 426 aa11.98□□□□□ -0.49
GABPA-202ENST00000400075 C11orf42Q8N5U0 333 aa11.98□□□□□ -0.49
GABPA-202ENST00000400075 CLDND2Q8NHS1 167 aa11.98□□□□□ -0.49
GABPA-202ENST00000400075 GTF3AQ92664 365 aaKnown RBP11.98□□□□□ -0.49
GABPA-202ENST00000400075 FCER1GP30273 86 aa11.98□□□□□ -0.49
GABPA-202ENST00000400075 P2RY4P51582 365 aa11.98□□□□□ -0.49
GABPA-202ENST00000400075 TMEM200BQ69YZ2 307 aa11.98□□□□□ -0.49
GABPA-202ENST00000400075 PPP1R3EQ9H7J1 279 aa11.98□□□□□ -0.49
GABPA-202ENST00000400075 NAT8BQ9UHF3 227 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms