RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 TRAV8-4A0A0B4J246 113 aa9.37□□□□□ -0.91
CACNA1C-216ENST00000399638 RNF223E7ERA6 249 aa9.37□□□□□ -0.91
CACNA1C-216ENST00000399638 CD8AP01732 235 aa9.37□□□□□ -0.91
CACNA1C-216ENST00000399638 LBHQ53QV2 105 aaPredicted RBP9.37□□□□□ -0.91
CACNA1C-216ENST00000399638 SLC35B3Q9H1N7 401 aa9.37□□□□□ -0.91
CACNA1C-216ENST00000399638 ZIC3O60481 467 aa9.37□□□□□ -0.91
CACNA1C-216ENST00000399638 TIMM23BQ5SRD1 257 aa9.37□□□□□ -0.91
CACNA1C-216ENST00000399638 LSM10Q969L4 123 aaKnown RBP9.37□□□□□ -0.91
CACNA1C-216ENST00000399638 PARLQ9H300 379 aa9.37□□□□□ -0.91
CACNA1C-216ENST00000399638 SEMA5BQ9P283 1151 aa9.37□□□□□ -0.91
CACNA1C-216ENST00000399638 A0A0U1RQV5 110 aa9.37□□□□□ -0.91
CACNA1C-216ENST00000399638 A0A1W2PQM1 296 aa9.37□□□□□ -0.91
CACNA1C-216ENST00000399638 SMIM13P0DJ93 91 aa9.37□□□□□ -0.91
CACNA1C-216ENST00000399638 PCP4P48539 62 aa9.37□□□□□ -0.91
CACNA1C-216ENST00000399638 PRELID3AQ96N28 172 aa9.37□□□□□ -0.91
CACNA1C-216ENST00000399638 C1orf43Q9BWL3 253 aa9.37□□□□□ -0.91
CACNA1C-216ENST00000399638 SMDT1Q9H4I9 107 aa9.37□□□□□ -0.91
CACNA1C-216ENST00000399638 MANBALQ9NQG1 85 aa9.37□□□□□ -0.91
CACNA1C-216ENST00000399638 LAMTOR3Q9UHA4 124 aa9.37□□□□□ -0.91
CACNA1C-216ENST00000399638 MYOD1P15172 320 aa9.37□□□□□ -0.91
CACNA1C-216ENST00000399638 C10orf128Q5T292 105 aa9.37□□□□□ -0.91
CACNA1C-216ENST00000399638 MDS2Q8NDY4 140 aa9.37□□□□□ -0.91
CACNA1C-216ENST00000399638 ZNF883P0CG24 379 aa9.36□□□□□ -0.91
CACNA1C-216ENST00000399638 TAF1LQ8IZX4 1826 aa9.36□□□□□ -0.91
CACNA1C-216ENST00000399638 IGHV3OR16-8A0A075B7F1 116 aa9.36□□□□□ -0.91
CACNA1C-216ENST00000399638 SFT2D2O95562 160 aa9.36□□□□□ -0.91
CACNA1C-216ENST00000399638 HSPB1P04792 205 aaKnown RBP9.36□□□□□ -0.91
CACNA1C-216ENST00000399638 IL11P20809 199 aa9.36□□□□□ -0.91
CACNA1C-216ENST00000399638 MESTQ5EB52 335 aa9.36□□□□□ -0.91
CACNA1C-216ENST00000399638 BIVMQ86UB2 503 aa9.36□□□□□ -0.91
CACNA1C-216ENST00000399638 HSPB9Q9BQS6 159 aa9.36□□□□□ -0.91
CACNA1C-216ENST00000399638 A8MXK9 166 aa9.36□□□□□ -0.91
CACNA1C-216ENST00000399638 LINC00869P0C866 280 aa9.36□□□□□ -0.91
CACNA1C-216ENST00000399638 CXCL3P19876 107 aa9.36□□□□□ -0.91
CACNA1C-216ENST00000399638 PPP1R1AQ13522 171 aa9.36□□□□□ -0.91
CACNA1C-216ENST00000399638 CEACAM21Q3KPI0 293 aa9.36□□□□□ -0.91
CACNA1C-216ENST00000399638 PET117Q6UWS5 81 aa9.36□□□□□ -0.91
CACNA1C-216ENST00000399638 GVQW1Q8N7I0 195 aa9.36□□□□□ -0.91
CACNA1C-216ENST00000399638 ZIC4Q8N9L1 334 aa9.36□□□□□ -0.91
CACNA1C-216ENST00000399638 MAPK1IP1LQ8NDC0 245 aa9.36□□□□□ -0.91
CACNA1C-216ENST00000399638 C17orf47Q8NEP4 570 aa9.36□□□□□ -0.91
CACNA1C-216ENST00000399638 FBXL15Q9H469 300 aa9.36□□□□□ -0.91
CACNA1C-216ENST00000399638 DPM3Q9P2X0 92 aa9.36□□□□□ -0.91
CACNA1C-216ENST00000399638 C17orf51A8MQB3 221 aa9.36□□□□□ -0.91
CACNA1C-216ENST00000399638 IGHV3-48P01763 117 aa9.36□□□□□ -0.91
CACNA1C-216ENST00000399638 ASAH2BP0C7U1 165 aa9.36□□□□□ -0.91
CACNA1C-216ENST00000399638 MEF2CQ06413 473 aaPredicted RBP9.36□□□□□ -0.91
CACNA1C-216ENST00000399638 FUT5Q11128 374 aa9.36□□□□□ -0.91
CACNA1C-216ENST00000399638 ARPC1AQ92747 370 aa9.36□□□□□ -0.91
CACNA1C-216ENST00000399638 C10orf35Q96D05 121 aa9.36□□□□□ -0.91
CACNA1C-216ENST00000399638 SCN3AQ9NY46 2000 aa9.36□□□□□ -0.91
CACNA1C-216ENST00000399638 RRHO14718 337 aa9.36□□□□□ -0.91
CACNA1C-216ENST00000399638 PGLYRP3Q96LB9 341 aa9.36□□□□□ -0.91
CACNA1C-216ENST00000399638 H7C1H1 209 aa9.35□□□□□ -0.91
CACNA1C-216ENST00000399638 INSL4Q14641 139 aa9.35□□□□□ -0.91
CACNA1C-216ENST00000399638 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.35□□□□□ -0.91
CACNA1C-216ENST00000399638 KIR3DL3Q8N743 410 aa9.35□□□□□ -0.91
CACNA1C-216ENST00000399638 Q9N2K0 584 aa9.35□□□□□ -0.91
CACNA1C-216ENST00000399638 RTTNQ86VV8 2226 aa9.35□□□□□ -0.91
CACNA1C-216ENST00000399638 TRAV41A0A0B4J266 112 aa9.35□□□□□ -0.91
CACNA1C-216ENST00000399638 CXorf1O96002 111 aa9.35□□□□□ -0.91
CACNA1C-216ENST00000399638 ZP4Q12836 540 aa9.35□□□□□ -0.91
CACNA1C-216ENST00000399638 VAX1Q5SQQ9 334 aa9.35□□□□□ -0.91
CACNA1C-216ENST00000399638 TMEM186Q96B77 213 aa9.35□□□□□ -0.91
CACNA1C-216ENST00000399638 KBTBD11-OT1A0A1B0GTJ5 212 aa9.35□□□□□ -0.91
CACNA1C-216ENST00000399638 CDC42EP2O14613 210 aa9.35□□□□□ -0.91
CACNA1C-216ENST00000399638 MT-ND6P03923 174 aa9.35□□□□□ -0.91
CACNA1C-216ENST00000399638 KIR2DL4Q99706 377 aa9.35□□□□□ -0.91
CACNA1C-216ENST00000399638 SOCS1O15524 211 aa9.35□□□□□ -0.91
CACNA1C-216ENST00000399638 CTAG2O75638 210 aa9.35□□□□□ -0.91
CACNA1C-216ENST00000399638 KLHL30-AS1Q8NEE0 82 aa9.35□□□□□ -0.91
CACNA1C-216ENST00000399638 LYNX1G3V0Z9 82 aa9.35□□□□□ -0.91
CACNA1C-216ENST00000399638 NCR2O95944 276 aa9.35□□□□□ -0.91
CACNA1C-216ENST00000399638 LYNX1P0DP58 116 aa9.35□□□□□ -0.91
CACNA1C-216ENST00000399638 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.35□□□□□ -0.91
CACNA1C-216ENST00000399638 C1QL1O75973 258 aa9.34□□□□□ -0.91
CACNA1C-216ENST00000399638 CTSDP07339 412 aaPredicted RBP9.34□□□□□ -0.91
CACNA1C-216ENST00000399638 FAM71F2Q6NXP2 309 aa9.34□□□□□ -0.91
CACNA1C-216ENST00000399638 C20orf204Q6ZNR8 217 aa9.34□□□□□ -0.91
CACNA1C-216ENST00000399638 ATG4DQ86TL0 474 aaPredicted RBP9.34□□□□□ -0.91
CACNA1C-216ENST00000399638 ZNF645Q8N7E2 425 aa9.34□□□□□ -0.91
CACNA1C-216ENST00000399638 BMPERQ8N8U9 685 aa9.34□□□□□ -0.91
CACNA1C-216ENST00000399638 QTRT1Q9BXR0 403 aaKnown RBP9.34□□□□□ -0.91
CACNA1C-216ENST00000399638 ODAMA1E959 279 aa9.34□□□□□ -0.91
CACNA1C-216ENST00000399638 M0QZK8 103 aa9.34□□□□□ -0.91
CACNA1C-216ENST00000399638 C1QTNF9P0C862 333 aa9.34□□□□□ -0.91
CACNA1C-216ENST00000399638 PNRC1Q12796 327 aaPredicted RBP9.34□□□□□ -0.91
CACNA1C-216ENST00000399638 CFHR5Q9BXR6 569 aa9.34□□□□□ -0.91
CACNA1C-216ENST00000399638 P2RY4P51582 365 aa9.34□□□□□ -0.91
CACNA1C-216ENST00000399638 ZNF585BQ52M93 769 aa9.34□□□□□ -0.91
CACNA1C-216ENST00000399638 TMEM91Q6ZNR0 172 aa9.34□□□□□ -0.91
CACNA1C-216ENST00000399638 SRXN1Q9BYN0 137 aa9.34□□□□□ -0.91
CACNA1C-216ENST00000399638 M0R381 172 aa9.34□□□□□ -0.91
CACNA1C-216ENST00000399638 TRGC1P0CF51 173 aa9.34□□□□□ -0.91
CACNA1C-216ENST00000399638 IL13RA2Q14627 380 aa9.34□□□□□ -0.91
CACNA1C-216ENST00000399638 SLC25A15Q9Y619 301 aa9.34□□□□□ -0.91
CACNA1C-216ENST00000399638 PPYP01298 95 aa9.34□□□□□ -0.92
CACNA1C-216ENST00000399638 MEF2BQ02080 365 aaPredicted RBP9.34□□□□□ -0.92
CACNA1C-216ENST00000399638 OR51M1Q9H341 326 aa9.34□□□□□ -0.92
CACNA1C-216ENST00000399638 SIRT4Q9Y6E7 314 aaPredicted RBP9.34□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms