RNA–Protein interactions for RNA: ENST00000399606.5

CACNA1C-210, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-210ENST00000399606 GPR183P32249 361 aa9.38□□□□□ -0.91
CACNA1C-210ENST00000399606 SCARF2Q96GP6 870 aaPredicted RBP9.38□□□□□ -0.91
CACNA1C-210ENST00000399606 LRRC37AA6NMS7 1700 aa9.38□□□□□ -0.91
CACNA1C-210ENST00000399606 OGG1O15527 345 aa9.37□□□□□ -0.91
CACNA1C-210ENST00000399606 EFEMP2O95967 443 aa9.37□□□□□ -0.91
CACNA1C-210ENST00000399606 MUC1P15941 1255 aaPredicted RBP9.37□□□□□ -0.91
CACNA1C-210ENST00000399606 ZIC1Q15915 447 aa9.37□□□□□ -0.91
CACNA1C-210ENST00000399606 IBA57Q5T440 356 aaKnown RBP9.37□□□□□ -0.91
CACNA1C-210ENST00000399606 TMEM42Q69YG0 159 aa9.37□□□□□ -0.91
CACNA1C-210ENST00000399606 KCNK7Q9Y2U2 307 aa9.37□□□□□ -0.91
CACNA1C-210ENST00000399606 COL4A1P02462 1669 aa9.37□□□□□ -0.91
CACNA1C-210ENST00000399606 TRAV8-4A0A0B4J246 113 aa9.37□□□□□ -0.91
CACNA1C-210ENST00000399606 RNF223E7ERA6 249 aa9.37□□□□□ -0.91
CACNA1C-210ENST00000399606 CD8AP01732 235 aa9.37□□□□□ -0.91
CACNA1C-210ENST00000399606 ZIC3O60481 467 aa9.37□□□□□ -0.91
CACNA1C-210ENST00000399606 TIMM23BQ5SRD1 257 aa9.37□□□□□ -0.91
CACNA1C-210ENST00000399606 PARLQ9H300 379 aa9.37□□□□□ -0.91
CACNA1C-210ENST00000399606 SEMA5BQ9P283 1151 aa9.37□□□□□ -0.91
CACNA1C-210ENST00000399606 UQCR10Q9UDW1 63 aa9.37□□□□□ -0.91
CACNA1C-210ENST00000399606 A0A0U1RQV5 110 aa9.37□□□□□ -0.91
CACNA1C-210ENST00000399606 A0A1W2PQM1 296 aa9.37□□□□□ -0.91
CACNA1C-210ENST00000399606 PCP4P48539 62 aa9.37□□□□□ -0.91
CACNA1C-210ENST00000399606 PRELID3AQ96N28 172 aa9.37□□□□□ -0.91
CACNA1C-210ENST00000399606 C1orf43Q9BWL3 253 aa9.37□□□□□ -0.91
CACNA1C-210ENST00000399606 SMDT1Q9H4I9 107 aa9.37□□□□□ -0.91
CACNA1C-210ENST00000399606 LAMTOR3Q9UHA4 124 aa9.37□□□□□ -0.91
CACNA1C-210ENST00000399606 C17orf51A8MQB3 221 aa9.37□□□□□ -0.91
CACNA1C-210ENST00000399606 MYOD1P15172 320 aa9.37□□□□□ -0.91
CACNA1C-210ENST00000399606 C10orf128Q5T292 105 aa9.37□□□□□ -0.91
CACNA1C-210ENST00000399606 MDS2Q8NDY4 140 aa9.37□□□□□ -0.91
CACNA1C-210ENST00000399606 C10orf35Q96D05 121 aa9.37□□□□□ -0.91
CACNA1C-210ENST00000399606 ZFPL1O95159 310 aa9.36□□□□□ -0.91
CACNA1C-210ENST00000399606 ZNF883P0CG24 379 aa9.36□□□□□ -0.91
CACNA1C-210ENST00000399606 TAF1LQ8IZX4 1826 aa9.36□□□□□ -0.91
CACNA1C-210ENST00000399606 IGHV3OR16-8A0A075B7F1 116 aa9.36□□□□□ -0.91
CACNA1C-210ENST00000399606 SOCS1O15524 211 aa9.36□□□□□ -0.91
CACNA1C-210ENST00000399606 PPYP01298 95 aa9.36□□□□□ -0.91
CACNA1C-210ENST00000399606 HSPB1P04792 205 aaKnown RBP9.36□□□□□ -0.91
CACNA1C-210ENST00000399606 IL11P20809 199 aa9.36□□□□□ -0.91
CACNA1C-210ENST00000399606 MESTQ5EB52 335 aa9.36□□□□□ -0.91
CACNA1C-210ENST00000399606 SLC25A34Q6PIV7 304 aa9.36□□□□□ -0.91
CACNA1C-210ENST00000399606 BIVMQ86UB2 503 aa9.36□□□□□ -0.91
CACNA1C-210ENST00000399606 A8MXK9 166 aa9.36□□□□□ -0.91
CACNA1C-210ENST00000399606 LINC00869P0C866 280 aa9.36□□□□□ -0.91
CACNA1C-210ENST00000399606 CXCL3P19876 107 aa9.36□□□□□ -0.91
CACNA1C-210ENST00000399606 CEACAM21Q3KPI0 293 aa9.36□□□□□ -0.91
CACNA1C-210ENST00000399606 ZIC4Q8N9L1 334 aa9.36□□□□□ -0.91
CACNA1C-210ENST00000399606 MAPK1IP1LQ8NDC0 245 aa9.36□□□□□ -0.91
CACNA1C-210ENST00000399606 FBXL15Q9H469 300 aa9.36□□□□□ -0.91
CACNA1C-210ENST00000399606 DPM3Q9P2X0 92 aa9.36□□□□□ -0.91
CACNA1C-210ENST00000399606 PXMP4Q9Y6I8 212 aa9.36□□□□□ -0.91
CACNA1C-210ENST00000399606 IGHV3-48P01763 117 aa9.36□□□□□ -0.91
CACNA1C-210ENST00000399606 ASAH2BP0C7U1 165 aa9.36□□□□□ -0.91
CACNA1C-210ENST00000399606 FUT5Q11128 374 aa9.36□□□□□ -0.91
CACNA1C-210ENST00000399606 SPNS2Q8IVW8 549 aa9.36□□□□□ -0.91
CACNA1C-210ENST00000399606 ARPC1AQ92747 370 aa9.36□□□□□ -0.91
CACNA1C-210ENST00000399606 SCN3AQ9NY46 2000 aa9.36□□□□□ -0.91
CACNA1C-210ENST00000399606 RRHO14718 337 aa9.36□□□□□ -0.91
CACNA1C-210ENST00000399606 LEPROTL1O95214 131 aa9.36□□□□□ -0.91
CACNA1C-210ENST00000399606 PGLYRP3Q96LB9 341 aa9.36□□□□□ -0.91
CACNA1C-210ENST00000399606 MRPL18Q9H0U6 180 aaKnown RBP9.36□□□□□ -0.91
CACNA1C-210ENST00000399606 H7C1H1 209 aa9.35□□□□□ -0.91
CACNA1C-210ENST00000399606 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.35□□□□□ -0.91
CACNA1C-210ENST00000399606 KIR3DL3Q8N743 410 aa9.35□□□□□ -0.91
CACNA1C-210ENST00000399606 TRAV41A0A0B4J266 112 aa9.35□□□□□ -0.91
CACNA1C-210ENST00000399606 FOLR2P14207 255 aa9.35□□□□□ -0.91
CACNA1C-210ENST00000399606 ZP4Q12836 540 aa9.35□□□□□ -0.91
CACNA1C-210ENST00000399606 VAX1Q5SQQ9 334 aa9.35□□□□□ -0.91
CACNA1C-210ENST00000399606 TMEM186Q96B77 213 aa9.35□□□□□ -0.91
CACNA1C-210ENST00000399606 KBTBD11-OT1A0A1B0GTJ5 212 aa9.35□□□□□ -0.91
CACNA1C-210ENST00000399606 MT-ND6P03923 174 aa9.35□□□□□ -0.91
CACNA1C-210ENST00000399606 KIR2DL4Q99706 377 aa9.35□□□□□ -0.91
CACNA1C-210ENST00000399606 KLHL30-AS1Q8NEE0 82 aa9.35□□□□□ -0.91
CACNA1C-210ENST00000399606 LYNX1G3V0Z9 82 aa9.35□□□□□ -0.91
CACNA1C-210ENST00000399606 NCR2O95944 276 aa9.35□□□□□ -0.91
CACNA1C-210ENST00000399606 LYNX1P0DP58 116 aa9.35□□□□□ -0.91
CACNA1C-210ENST00000399606 LYZL2Q7Z4W2 148 aa9.35□□□□□ -0.91
CACNA1C-210ENST00000399606 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.35□□□□□ -0.91
CACNA1C-210ENST00000399606 C1QL1O75973 258 aa9.34□□□□□ -0.91
CACNA1C-210ENST00000399606 FAM71F2Q6NXP2 309 aa9.34□□□□□ -0.91
CACNA1C-210ENST00000399606 C20orf204Q6ZNR8 217 aa9.34□□□□□ -0.91
CACNA1C-210ENST00000399606 ATG4DQ86TL0 474 aaPredicted RBP9.34□□□□□ -0.91
CACNA1C-210ENST00000399606 ZNF645Q8N7E2 425 aa9.34□□□□□ -0.91
CACNA1C-210ENST00000399606 BMPERQ8N8U9 685 aa9.34□□□□□ -0.91
CACNA1C-210ENST00000399606 QTRT1Q9BXR0 403 aaKnown RBP9.34□□□□□ -0.91
CACNA1C-210ENST00000399606 ODAMA1E959 279 aa9.34□□□□□ -0.91
CACNA1C-210ENST00000399606 C1QTNF9P0C862 333 aa9.34□□□□□ -0.91
CACNA1C-210ENST00000399606 CFHR5Q9BXR6 569 aa9.34□□□□□ -0.91
CACNA1C-210ENST00000399606 HLA-DRB1P01911 266 aa9.34□□□□□ -0.91
CACNA1C-210ENST00000399606 P2RY4P51582 365 aa9.34□□□□□ -0.91
CACNA1C-210ENST00000399606 ZNF585BQ52M93 769 aa9.34□□□□□ -0.91
CACNA1C-210ENST00000399606 TMEM91Q6ZNR0 172 aa9.34□□□□□ -0.91
CACNA1C-210ENST00000399606 SRXN1Q9BYN0 137 aa9.34□□□□□ -0.91
CACNA1C-210ENST00000399606 M0R381 172 aa9.34□□□□□ -0.91
CACNA1C-210ENST00000399606 TRGC1P0CF51 173 aa9.34□□□□□ -0.91
CACNA1C-210ENST00000399606 H1FOOQ8IZA3 346 aaPredicted RBP9.34□□□□□ -0.91
CACNA1C-210ENST00000399606 SLC25A15Q9Y619 301 aa9.34□□□□□ -0.91
CACNA1C-210ENST00000399606 MEF2BQ02080 365 aaPredicted RBP9.34□□□□□ -0.92
CACNA1C-210ENST00000399606 OR51M1Q9H341 326 aa9.34□□□□□ -0.92
CACNA1C-210ENST00000399606 NPVFQ9HCQ7 196 aa9.34□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms