RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 RAB4BP61018 213 aa12.94□□□□□ -0.34
HOXA3-202ENST00000396352 LRP11Q86VZ4 500 aa12.94□□□□□ -0.34
HOXA3-202ENST00000396352 PLSCR4Q9NRQ2 329 aa12.94□□□□□ -0.34
HOXA3-202ENST00000396352 TP53TG5Q9Y2B4 290 aa12.94□□□□□ -0.34
HOXA3-202ENST00000396352 INTS1Q8N201 2190 aaKnown RBP12.94□□□□□ -0.34
HOXA3-202ENST00000396352 KIR2DS2P43631 304 aa12.93□□□□□ -0.34
HOXA3-202ENST00000396352 MZT1Q08AG7 82 aa12.93□□□□□ -0.34
HOXA3-202ENST00000396352 STPG3Q8N7X2 389 aa12.93□□□□□ -0.34
HOXA3-202ENST00000396352 LEAP2Q969E1 77 aa12.93□□□□□ -0.34
HOXA3-202ENST00000396352 PRR33A8MZF0 331 aa12.93□□□□□ -0.34
HOXA3-202ENST00000396352 CFHR2P36980 270 aa12.93□□□□□ -0.34
HOXA3-202ENST00000396352 RPL31P62899 125 aaKnown RBP12.93□□□□□ -0.34
HOXA3-202ENST00000396352 HLA-DRB5Q30154 266 aa12.93□□□□□ -0.34
HOXA3-202ENST00000396352 FDCSPQ8NFU4 85 aa12.93□□□□□ -0.34
HOXA3-202ENST00000396352 OR10G8Q8NGN5 311 aa12.93□□□□□ -0.34
HOXA3-202ENST00000396352 OPN3Q9H1Y3 402 aaPredicted RBP12.93□□□□□ -0.34
HOXA3-202ENST00000396352 ZNF71Q9NQZ8 489 aaPredicted RBP12.93□□□□□ -0.34
HOXA3-202ENST00000396352 FKBP11Q9NYL4 201 aa12.93□□□□□ -0.34
HOXA3-202ENST00000396352 CALYQ9NYX4 217 aa12.93□□□□□ -0.34
HOXA3-202ENST00000396352 FOXH1O75593 365 aa12.93□□□□□ -0.34
HOXA3-202ENST00000396352 TNFSF13O75888 250 aa12.93□□□□□ -0.34
HOXA3-202ENST00000396352 CGB3P0DN86 165 aa12.93□□□□□ -0.34
HOXA3-202ENST00000396352 CGB7P0DN87 165 aa12.93□□□□□ -0.34
HOXA3-202ENST00000396352 THBS3P49746 956 aa12.93□□□□□ -0.34
HOXA3-202ENST00000396352 OR4S2Q8NH73 311 aa12.93□□□□□ -0.34
HOXA3-202ENST00000396352 TMEM14BQ9NUH8 114 aa12.93□□□□□ -0.34
HOXA3-202ENST00000396352 SRSF6Q13247 344 aaKnown RBP12.92□□□□□ -0.34
HOXA3-202ENST00000396352 C17orf58Q2M2W7 97 aa12.92□□□□□ -0.34
HOXA3-202ENST00000396352 TEPPQ6URK8 271 aa12.92□□□□□ -0.34
HOXA3-202ENST00000396352 C11orf52Q96A22 123 aa12.92□□□□□ -0.34
HOXA3-202ENST00000396352 TP53TG3Q9ULZ0 132 aa12.92□□□□□ -0.34
HOXA3-202ENST00000396352 FOXA2Q9Y261 457 aaPredicted RBP12.92□□□□□ -0.34
HOXA3-202ENST00000396352 TANC2Q9HCD6 1990 aa12.92□□□□□ -0.34
HOXA3-202ENST00000396352 DSCAMO60469 2012 aa12.92□□□□□ -0.34
HOXA3-202ENST00000396352 OR4A47Q6IF82 309 aa12.92□□□□□ -0.34
HOXA3-202ENST00000396352 SLC24A4Q8NFF2 622 aa12.92□□□□□ -0.34
HOXA3-202ENST00000396352 POLR3KQ9Y2Y1 108 aaPredicted RBP12.92□□□□□ -0.34
HOXA3-202ENST00000396352 SAA2-SAA4A0A096LPE2 208 aa12.91□□□□□ -0.34
HOXA3-202ENST00000396352 EREGO14944 169 aa12.91□□□□□ -0.34
HOXA3-202ENST00000396352 NKX2-8O15522 239 aa12.91□□□□□ -0.34
HOXA3-202ENST00000396352 CGAP01215 116 aa12.91□□□□□ -0.34
HOXA3-202ENST00000396352 SAA2P0DJI9 122 aaPredicted RBP12.91□□□□□ -0.34
HOXA3-202ENST00000396352 NPY1RP25929 384 aa12.91□□□□□ -0.34
HOXA3-202ENST00000396352 CCL11P51671 97 aa12.91□□□□□ -0.34
HOXA3-202ENST00000396352 SELENOTP62341 195 aa12.91□□□□□ -0.34
HOXA3-202ENST00000396352 CT45A1Q5HYN5 189 aa12.91□□□□□ -0.34
HOXA3-202ENST00000396352 CT45A3Q8NHU0 189 aa12.91□□□□□ -0.34
HOXA3-202ENST00000396352 PPP1R35Q8TAP8 253 aa12.91□□□□□ -0.34
HOXA3-202ENST00000396352 LINC00310P59036 64 aa12.91□□□□□ -0.34
HOXA3-202ENST00000396352 RHOBP62745 196 aa12.91□□□□□ -0.34
HOXA3-202ENST00000396352 C1orf174Q8IYL3 243 aa12.91□□□□□ -0.34
HOXA3-202ENST00000396352 IL36BQ9NZH7 164 aa12.91□□□□□ -0.34
HOXA3-202ENST00000396352 SLC25A15Q9Y619 301 aa12.91□□□□□ -0.34
HOXA3-202ENST00000396352 GRIFINA4D1Z8 144 aa12.91□□□□□ -0.34
HOXA3-202ENST00000396352 SLC17A3O00476 420 aa12.91□□□□□ -0.34
HOXA3-202ENST00000396352 SCGB1D1O95968 90 aa12.91□□□□□ -0.34
HOXA3-202ENST00000396352 CA2P00918 260 aa12.91□□□□□ -0.34
HOXA3-202ENST00000396352 SELLP14151 372 aa12.91□□□□□ -0.34
HOXA3-202ENST00000396352 RPL29P47914 159 aaKnown RBP12.91□□□□□ -0.34
HOXA3-202ENST00000396352 PRR20EP86478 221 aa12.91□□□□□ -0.34
HOXA3-202ENST00000396352 PRR20CP86479 221 aa12.91□□□□□ -0.34
HOXA3-202ENST00000396352 PRR20DP86480 221 aa12.91□□□□□ -0.34
HOXA3-202ENST00000396352 PRR20BP86481 221 aa12.91□□□□□ -0.34
HOXA3-202ENST00000396352 PRR20AP86496 221 aa12.91□□□□□ -0.34
HOXA3-202ENST00000396352 STARD4Q96DR4 205 aa12.91□□□□□ -0.34
HOXA3-202ENST00000396352 LOXL4Q96JB6 756 aa12.91□□□□□ -0.34
HOXA3-202ENST00000396352 OR2V2Q96R30 315 aa12.91□□□□□ -0.34
HOXA3-202ENST00000396352 DKK4Q9UBT3 224 aa12.91□□□□□ -0.34
HOXA3-202ENST00000396352 ITGB1BP1O14713 200 aa12.9□□□□□ -0.34
HOXA3-202ENST00000396352 LHBP01229 141 aa12.9□□□□□ -0.34
HOXA3-202ENST00000396352 MYOD1P15172 320 aa12.9□□□□□ -0.34
HOXA3-202ENST00000396352 CBLN1P23435 193 aa12.9□□□□□ -0.34
HOXA3-202ENST00000396352 BHLHA15Q7RTS1 189 aaPredicted RBP12.9□□□□□ -0.34
HOXA3-202ENST00000396352 MOGAT3Q86VF5 341 aa12.9□□□□□ -0.34
HOXA3-202ENST00000396352 IDI2-AS1Q9NZ38 188 aa12.9□□□□□ -0.34
HOXA3-202ENST00000396352 NAGKQ9UJ70 344 aa12.9□□□□□ -0.34
HOXA3-202ENST00000396352 KIR2DL5BA0A0G2JN68 375 aa12.9□□□□□ -0.34
HOXA3-202ENST00000396352 KIR2DL5BA0A0G2JPC4 375 aa12.9□□□□□ -0.34
HOXA3-202ENST00000396352 C9JCJ5 164 aa12.9□□□□□ -0.34
HOXA3-202ENST00000396352 IGFBP2P18065 325 aa12.9□□□□□ -0.34
HOXA3-202ENST00000396352 HSPE1P61604 102 aaKnown RBP12.9□□□□□ -0.34
HOXA3-202ENST00000396352 USF2Q15853 346 aaPredicted RBP12.9□□□□□ -0.34
HOXA3-202ENST00000396352 KIR2DL5AQ8N109 375 aa12.9□□□□□ -0.34
HOXA3-202ENST00000396352 RAI1Q7Z5J4 1906 aaPredicted RBP12.9□□□□□ -0.35
HOXA3-202ENST00000396352 TRGV10A0A0A0MS01 117 aa12.89□□□□□ -0.35
HOXA3-202ENST00000396352 RAB7AP51149 207 aa12.89□□□□□ -0.35
HOXA3-202ENST00000396352 C1orf194Q5T5A4 169 aa12.89□□□□□ -0.35
HOXA3-202ENST00000396352 IGFL2Q6UWQ7 119 aa12.89□□□□□ -0.35
HOXA3-202ENST00000396352 NEUROG1Q92886 237 aa12.89□□□□□ -0.35
HOXA3-202ENST00000396352 MS4A10Q96PG2 267 aa12.89□□□□□ -0.35
HOXA3-202ENST00000396352 TRAV9-1A0A075B6T8 112 aa12.89□□□□□ -0.35
HOXA3-202ENST00000396352 LINC00869P0C866 280 aa12.89□□□□□ -0.35
HOXA3-202ENST00000396352 FAM169BQ8N8A8 192 aa12.89□□□□□ -0.35
HOXA3-202ENST00000396352 OR4P4Q8NGL7 312 aa12.89□□□□□ -0.35
HOXA3-202ENST00000396352 SARAFQ96BY9 339 aa12.89□□□□□ -0.35
HOXA3-202ENST00000396352 ZNF90Q03938 601 aa12.89□□□□□ -0.35
HOXA3-202ENST00000396352 TGIF2LXQ8IUE1 241 aa12.89□□□□□ -0.35
HOXA3-202ENST00000396352 CMTM2Q8TAZ6 248 aa12.89□□□□□ -0.35
HOXA3-202ENST00000396352 EAF1Q96JC9 268 aaPredicted RBP12.89□□□□□ -0.35
HOXA3-202ENST00000396352 PROCRQ9UNN8 238 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms