RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 MARVELD3Q96A59 401 aa12.69□□□□□ -0.38
CCDC50-201ENST00000392455 ST6GAL2Q96JF0 529 aa12.69□□□□□ -0.38
CCDC50-201ENST00000392455 DUX3Q96PT4 197 aa12.69□□□□□ -0.38
CCDC50-201ENST00000392455 SOSTQ9BQB4 213 aa12.69□□□□□ -0.38
CCDC50-201ENST00000392455 PEX7O00628 323 aa12.69□□□□□ -0.38
CCDC50-201ENST00000392455 INAFM2P0DMQ5 153 aa12.69□□□□□ -0.38
CCDC50-201ENST00000392455 MRPL24Q96A35 216 aaKnown RBP12.69□□□□□ -0.38
CCDC50-201ENST00000392455 CHAC1Q9BUX1 264 aa12.69□□□□□ -0.38
CCDC50-201ENST00000392455 TMEFF2Q9UIK5 374 aaPredicted RBP12.69□□□□□ -0.38
CCDC50-201ENST00000392455 SSTR5P35346 364 aa12.68□□□□□ -0.38
CCDC50-201ENST00000392455 HSPE1P61604 102 aaKnown RBP12.68□□□□□ -0.38
CCDC50-201ENST00000392455 ZNF415Q09FC8 603 aa12.68□□□□□ -0.38
CCDC50-201ENST00000392455 NKG7Q16617 165 aa12.68□□□□□ -0.38
CCDC50-201ENST00000392455 TNRC6AQ8NDV7 1962 aaKnown RBP12.68□□□□□ -0.38
CCDC50-201ENST00000392455 IGLV3-16A0A075B6K0 115 aa12.68□□□□□ -0.38
CCDC50-201ENST00000392455 OR10J3Q5JRS4 329 aa12.68□□□□□ -0.38
CCDC50-201ENST00000392455 ZNF236Q9UL36 1845 aa12.68□□□□□ -0.38
CCDC50-201ENST00000392455 IGHV3OR15-7A0A075B7D8 119 aa12.68□□□□□ -0.38
CCDC50-201ENST00000392455 AHRRA9YTQ3 701 aa12.68□□□□□ -0.38
CCDC50-201ENST00000392455 SRSF1Q07955 248 aaKnown RBP eCLIP12.68□□□□□ -0.38
CCDC50-201ENST00000392455 LOC102723996A0A087X1L8 192 aa12.68□□□□□ -0.38
CCDC50-201ENST00000392455 UPK2O00526 184 aa12.68□□□□□ -0.38
CCDC50-201ENST00000392455 THY1P04216 161 aa12.68□□□□□ -0.38
CCDC50-201ENST00000392455 DMRTA1Q5VZB9 504 aa12.68□□□□□ -0.38
CCDC50-201ENST00000392455 QSER1Q2KHR3 1735 aa12.68□□□□□ -0.38
CCDC50-201ENST00000392455 DPM2O94777 84 aa12.68□□□□□ -0.38
CCDC50-201ENST00000392455 MPV17P39210 176 aa12.68□□□□□ -0.38
CCDC50-201ENST00000392455 MRM2Q9UI43 246 aaKnown RBP12.68□□□□□ -0.38
CCDC50-201ENST00000392455 TCRBV16S1A1N1A0A5B0 115 aa12.68□□□□□ -0.38
CCDC50-201ENST00000392455 FSTP19883 344 aa12.68□□□□□ -0.38
CCDC50-201ENST00000392455 CENPVQ7Z7K6 275 aaPredicted RBP12.68□□□□□ -0.38
CCDC50-201ENST00000392455 FXYD1O00168 92 aa12.67□□□□□ -0.38
CCDC50-201ENST00000392455 PEX11BO96011 259 aa12.67□□□□□ -0.38
CCDC50-201ENST00000392455 TNFRSF9Q07011 255 aa12.67□□□□□ -0.38
CCDC50-201ENST00000392455 ABHD17AQ96GS6 310 aa12.67□□□□□ -0.38
CCDC50-201ENST00000392455 LEPP41159 167 aa12.67□□□□□ -0.38
CCDC50-201ENST00000392455 ZNF585BQ52M93 769 aa12.67□□□□□ -0.38
CCDC50-201ENST00000392455 RHOVQ96L33 236 aa12.67□□□□□ -0.38
CCDC50-201ENST00000392455 CD8AP01732 235 aa12.67□□□□□ -0.38
CCDC50-201ENST00000392455 CTAG1AP78358 180 aa12.67□□□□□ -0.38
CCDC50-201ENST00000392455 TBR1Q16650 682 aa12.67□□□□□ -0.38
CCDC50-201ENST00000392455 XAF1Q6GPH4 301 aa12.67□□□□□ -0.38
CCDC50-201ENST00000392455 IL9P15248 144 aa12.67□□□□□ -0.38
CCDC50-201ENST00000392455 TSPAN7P41732 249 aa12.67□□□□□ -0.38
CCDC50-201ENST00000392455 RHOGP84095 191 aa12.67□□□□□ -0.38
CCDC50-201ENST00000392455 MS4A3Q96HJ5 214 aa12.67□□□□□ -0.38
CCDC50-201ENST00000392455 PAPPAQ13219 1627 aa12.67□□□□□ -0.38
CCDC50-201ENST00000392455 KLF4O43474 513 aa12.67□□□□□ -0.38
CCDC50-201ENST00000392455 CBLN3Q6UW01 205 aa12.67□□□□□ -0.38
CCDC50-201ENST00000392455 CLEC7AQ9BXN2 247 aa12.67□□□□□ -0.38
CCDC50-201ENST00000392455 PRR13Q9NZ81 148 aa12.67□□□□□ -0.38
CCDC50-201ENST00000392455 TOMM7Q9P0U1 55 aa12.67□□□□□ -0.38
CCDC50-201ENST00000392455 MGAT2Q10469 447 aa12.67□□□□□ -0.38
CCDC50-201ENST00000392455 GAGE13Q4V321 117 aa12.67□□□□□ -0.38
CCDC50-201ENST00000392455 GPR183P32249 361 aa12.67□□□□□ -0.38
CCDC50-201ENST00000392455 TNCP24821 2201 aa12.66□□□□□ -0.38
CCDC50-201ENST00000392455 MARCH11A6NNE9 402 aa12.66□□□□□ -0.38
CCDC50-201ENST00000392455 J3QW42 95 aa12.66□□□□□ -0.38
CCDC50-201ENST00000392455 ERVK11-1P61568 191 aa12.66□□□□□ -0.38
CCDC50-201ENST00000392455 TM4SF5O14894 197 aa12.66□□□□□ -0.38
CCDC50-201ENST00000392455 SSBP2P81877 361 aaPredicted RBP12.66□□□□□ -0.38
CCDC50-201ENST00000392455 ZNF488Q96MN9 340 aa12.66□□□□□ -0.38
CCDC50-201ENST00000392455 SOCS1O15524 211 aa12.66□□□□□ -0.38
CCDC50-201ENST00000392455 CHODLQ9H9P2 273 aa12.66□□□□□ -0.38
CCDC50-201ENST00000392455 FAM60AQ9NP50 221 aa12.66□□□□□ -0.38
CCDC50-201ENST00000392455 A0A087WWC5 75 aa12.66□□□□□ -0.38
CCDC50-201ENST00000392455 LOXL4Q96JB6 756 aa12.66□□□□□ -0.38
CCDC50-201ENST00000392455 IMMP2LQ96T52 175 aa12.66□□□□□ -0.38
CCDC50-201ENST00000392455 THSD4Q6ZMP0 1018 aa12.66□□□□□ -0.38
CCDC50-201ENST00000392455 SELENOHQ8IZQ5 122 aaKnown RBP12.66□□□□□ -0.38
CCDC50-201ENST00000392455 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.66□□□□□ -0.38
CCDC50-201ENST00000392455 OR9G4Q8NGQ1 327 aa12.66□□□□□ -0.38
CCDC50-201ENST00000392455 RASL10BQ96S79 203 aa12.66□□□□□ -0.38
CCDC50-201ENST00000392455 CASP8AP2Q9UKL3 1982 aa12.66□□□□□ -0.38
CCDC50-201ENST00000392455 F2Z2F3 143 aa12.66□□□□□ -0.38
CCDC50-201ENST00000392455 FREM1Q5H8C1 2179 aa12.66□□□□□ -0.38
CCDC50-201ENST00000392455 ZFP36L2P47974 494 aaKnown RBP12.65□□□□□ -0.38
CCDC50-201ENST00000392455 PDLIM4P50479 330 aa12.65□□□□□ -0.38
CCDC50-201ENST00000392455 CCL21O00585 134 aa12.65□□□□□ -0.38
CCDC50-201ENST00000392455 PTP4A3O75365 173 aa12.65□□□□□ -0.38
CCDC50-201ENST00000392455 TFPI2P48307 235 aa12.65□□□□□ -0.38
CCDC50-201ENST00000392455 CENPWQ5EE01 88 aa12.65□□□□□ -0.38
CCDC50-201ENST00000392455 SIPA1L3O60292 1781 aaPredicted RBP12.65□□□□□ -0.38
CCDC50-201ENST00000392455 DANCRP0C864 163 aa12.65□□□□□ -0.38
CCDC50-201ENST00000392455 HIKESHIQ53FT3 197 aa12.65□□□□□ -0.38
CCDC50-201ENST00000392455 TRGV2A0A075B6R0 118 aa12.65□□□□□ -0.38
CCDC50-201ENST00000392455 GTSCR1Q86UQ5 136 aa12.65□□□□□ -0.38
CCDC50-201ENST00000392455 OR9G1Q8NH87 305 aa12.65□□□□□ -0.38
CCDC50-201ENST00000392455 JPT1Q9UK76 154 aa12.65□□□□□ -0.38
CCDC50-201ENST00000392455 PKIGQ9Y2B9 76 aa12.65□□□□□ -0.38
CCDC50-201ENST00000392455 SLC25A53Q5H9E4 307 aa12.65□□□□□ -0.38
CCDC50-201ENST00000392455 RNASEH2CQ8TDP1 164 aaKnown RBP12.65□□□□□ -0.38
CCDC50-201ENST00000392455 IDI2-AS1Q9NZ38 188 aa12.65□□□□□ -0.38
CCDC50-201ENST00000392455 CACNG8Q8WXS5 425 aa12.65□□□□□ -0.39
CCDC50-201ENST00000392455 DRD3P35462 400 aa12.64□□□□□ -0.39
CCDC50-201ENST00000392455 FAM27BQ5VT28 67 aa12.64□□□□□ -0.39
CCDC50-201ENST00000392455 WDR82Q6UXN9 313 aa12.64□□□□□ -0.39
CCDC50-201ENST00000392455 OR10W1Q8NGF6 305 aa12.64□□□□□ -0.39
CCDC50-201ENST00000392455 ST20Q9HBF5 79 aa12.64□□□□□ -0.39
CCDC50-201ENST00000392455 IL36BQ9NZH7 164 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms