RNA–Protein interactions for RNA: ENST00000390497.1

TRAJ40-201, Transcript of T cell receptor alpha joining 40, humanhuman

APPRIS P1 BASIC

Gene TRAJ40, Length 61 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ40-201ENST00000390497 LSM6P62312 80 aaKnown RBP1.31□□□□□ -2.2
TRAJ40-201ENST00000390497 RANP62826 216 aaKnown RBP1.31□□□□□ -2.2
TRAJ40-201ENST00000390497 HIST1H3AP68431 136 aa1.31□□□□□ -2.2
TRAJ40-201ENST00000390497 H3F3AP84243 136 aa1.31□□□□□ -2.2
TRAJ40-201ENST00000390497 REEP5Q00765 189 aa1.31□□□□□ -2.2
TRAJ40-201ENST00000390497 TMEM97Q5BJF2 176 aa1.31□□□□□ -2.2
TRAJ40-201ENST00000390497 TMEM42Q69YG0 159 aa1.31□□□□□ -2.2
TRAJ40-201ENST00000390497 Q8NDZ9 215 aa1.31□□□□□ -2.2
TRAJ40-201ENST00000390497 OR4X2Q8NGF9 303 aa1.31□□□□□ -2.2
TRAJ40-201ENST00000390497 ACOT12Q8WYK0 555 aa1.31□□□□□ -2.2
TRAJ40-201ENST00000390497 SLC7A6Q92536 515 aa1.31□□□□□ -2.2
TRAJ40-201ENST00000390497 DOHHQ9BU89 302 aa1.31□□□□□ -2.2
TRAJ40-201ENST00000390497 TTTY12Q9BZ98 90 aa1.31□□□□□ -2.2
TRAJ40-201ENST00000390497 WDR61Q9GZS3 305 aaKnown RBP1.31□□□□□ -2.2
TRAJ40-201ENST00000390497 EFCAB1Q9HAE3 211 aa1.31□□□□□ -2.2
TRAJ40-201ENST00000390497 PAQR5Q9NXK6 330 aaPredicted RBP1.31□□□□□ -2.2
TRAJ40-201ENST00000390497 GLTPQ9NZD2 209 aa1.31□□□□□ -2.2
TRAJ40-201ENST00000390497 PIK3C2GO75747 1445 aa1.31□□□□□ -2.2
TRAJ40-201ENST00000390497 DENND4BO75064 1496 aaPredicted RBP1.31□□□□□ -2.2
TRAJ40-201ENST00000390497 TRBV20OR9-2A0A075B6H5 130 aa1.3□□□□□ -2.2
TRAJ40-201ENST00000390497 TRAV7A0A075B6U4 112 aa1.3□□□□□ -2.2
TRAJ40-201ENST00000390497 TRAV38-1A0A0B4J264 116 aa1.3□□□□□ -2.2
TRAJ40-201ENST00000390497 MDFIC2A0A1B0GVS7 189 aa1.3□□□□□ -2.2
TRAJ40-201ENST00000390497 J3QQQ9 107 aa1.3□□□□□ -2.2
TRAJ40-201ENST00000390497 LEPROTO15243 131 aa1.3□□□□□ -2.2
TRAJ40-201ENST00000390497 IGHV3-7P01780 117 aa1.3□□□□□ -2.2
TRAJ40-201ENST00000390497 TTRP02766 147 aa1.3□□□□□ -2.2
TRAJ40-201ENST00000390497 SERPINA7P05543 415 aa1.3□□□□□ -2.2
TRAJ40-201ENST00000390497 LGALS1P09382 135 aaKnown RBP1.3□□□□□ -2.2
TRAJ40-201ENST00000390497 HIST1H2BOP23527 126 aa1.3□□□□□ -2.2
TRAJ40-201ENST00000390497 HIST1H2BBP33778 126 aa1.3□□□□□ -2.2
TRAJ40-201ENST00000390497 RPL5P46777 297 aaKnown RBP1.3□□□□□ -2.2
TRAJ40-201ENST00000390497 HIST1H2BDP58876 126 aa1.3□□□□□ -2.2
TRAJ40-201ENST00000390497 RPL26P61254 145 aaKnown RBP1.3□□□□□ -2.2
TRAJ40-201ENST00000390497 HIST1H2BCP62807 126 aa1.3□□□□□ -2.2
TRAJ40-201ENST00000390497 CCL20P78556 96 aa1.3□□□□□ -2.2
TRAJ40-201ENST00000390497 TMED2Q15363 201 aa1.3□□□□□ -2.2
TRAJ40-201ENST00000390497 NDUFA5Q16718 116 aa1.3□□□□□ -2.2
TRAJ40-201ENST00000390497 HIST2H2BEQ16778 126 aa1.3□□□□□ -2.2
TRAJ40-201ENST00000390497 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.3□□□□□ -2.2
TRAJ40-201ENST00000390497 LCE1CQ5T751 118 aa1.3□□□□□ -2.2
TRAJ40-201ENST00000390497 LCE1BQ5T7P3 118 aa1.3□□□□□ -2.2
TRAJ40-201ENST00000390497 KRTAP5-4Q6L8H1 288 aa1.3□□□□□ -2.2
TRAJ40-201ENST00000390497 KTN1-AS1Q86SY8 53 aa1.3□□□□□ -2.2
TRAJ40-201ENST00000390497 OR6V1Q8N148 313 aa1.3□□□□□ -2.2
TRAJ40-201ENST00000390497 TMEM86AQ8N2M4 240 aa1.3□□□□□ -2.2
TRAJ40-201ENST00000390497 OR13C4Q8NGS5 318 aa1.3□□□□□ -2.2
TRAJ40-201ENST00000390497 HIST1H2BHQ93079 126 aa1.3□□□□□ -2.2
TRAJ40-201ENST00000390497 BTF3L4Q96K17 158 aa1.3□□□□□ -2.2
TRAJ40-201ENST00000390497 TSPAN32Q96QS1 320 aa1.3□□□□□ -2.2
TRAJ40-201ENST00000390497 IMMP2LQ96T52 175 aa1.3□□□□□ -2.2
TRAJ40-201ENST00000390497 KLF6Q99612 283 aaPredicted RBP1.3□□□□□ -2.2
TRAJ40-201ENST00000390497 HIST1H2BNQ99877 126 aa1.3□□□□□ -2.2
TRAJ40-201ENST00000390497 HIST1H2BMQ99879 126 aa1.3□□□□□ -2.2
TRAJ40-201ENST00000390497 DCSTAMPQ9H295 470 aa1.3□□□□□ -2.2
TRAJ40-201ENST00000390497 IL36BQ9NZH7 164 aa1.3□□□□□ -2.2
TRAJ40-201ENST00000390497 MRPL27Q9P0M9 148 aaKnown RBP1.3□□□□□ -2.2
TRAJ40-201ENST00000390497 DOK5Q9P104 306 aa1.3□□□□□ -2.2
TRAJ40-201ENST00000390497 RPL26L1Q9UNX3 145 aaKnown RBP1.3□□□□□ -2.2
TRAJ40-201ENST00000390497 RBM7Q9Y580 266 aaKnown RBP1.3□□□□□ -2.2
TRAJ40-201ENST00000390497 TMEM56-RWDD3S4R434 201 aa1.3□□□□□ -2.2
TRAJ40-201ENST00000390497 HIVEP2P31629 2446 aa1.3□□□□□ -2.2
TRAJ40-201ENST00000390497 RTL1A6NKG5 1358 aa1.3□□□□□ -2.2
TRAJ40-201ENST00000390497 MTUS2Q5JR59 1369 aa1.3□□□□□ -2.2
TRAJ40-201ENST00000390497 NLRC5Q86WI3 1866 aa1.29□□□□□ -2.2
TRAJ40-201ENST00000390497 DSCAML1Q8TD84 2053 aa1.29□□□□□ -2.2
TRAJ40-201ENST00000390497 TMSB15BA0A087X1C1 80 aa1.29□□□□□ -2.2
TRAJ40-201ENST00000390497 GGT3PA6NGU5 568 aa1.29□□□□□ -2.2
TRAJ40-201ENST00000390497 SMIM9A6NGZ8 99 aa1.29□□□□□ -2.2
TRAJ40-201ENST00000390497 H7C2G1 150 aa1.29□□□□□ -2.2
TRAJ40-201ENST00000390497 HAND1O96004 215 aa1.29□□□□□ -2.2
TRAJ40-201ENST00000390497 IFNA10P01566 189 aa1.29□□□□□ -2.2
TRAJ40-201ENST00000390497 PRM2P04554 102 aa1.29□□□□□ -2.2
TRAJ40-201ENST00000390497 IFNA6P05013 189 aa1.29□□□□□ -2.2
TRAJ40-201ENST00000390497 SULT1A3P0DMM9 295 aa1.29□□□□□ -2.2
TRAJ40-201ENST00000390497 SULT1A4P0DMN0 295 aa1.29□□□□□ -2.2
TRAJ40-201ENST00000390497 RPL28P46779 137 aaKnown RBP1.29□□□□□ -2.2
TRAJ40-201ENST00000390497 KRTAP10-1P60331 282 aa1.29□□□□□ -2.2
TRAJ40-201ENST00000390497 RAB14P61106 215 aa1.29□□□□□ -2.2
TRAJ40-201ENST00000390497 RPL18Q07020 188 aaKnown RBP1.29□□□□□ -2.2
TRAJ40-201ENST00000390497 GUK1Q16774 197 aa1.29□□□□□ -2.2
TRAJ40-201ENST00000390497 SPANXN3Q5MJ09 141 aa1.29□□□□□ -2.2
TRAJ40-201ENST00000390497 IBA57Q5T440 356 aaKnown RBP1.29□□□□□ -2.2
TRAJ40-201ENST00000390497 RPL22L1Q6P5R6 122 aaKnown RBP1.29□□□□□ -2.2
TRAJ40-201ENST00000390497 ZNF705AQ6ZN79 300 aaPredicted RBP1.29□□□□□ -2.2
TRAJ40-201ENST00000390497 RPP25LQ8N5L8 163 aaKnown RBP1.29□□□□□ -2.2
TRAJ40-201ENST00000390497 PACRGLQ8N7B6 248 aa1.29□□□□□ -2.2
TRAJ40-201ENST00000390497 OR8B12Q8NGG6 310 aa1.29□□□□□ -2.2
TRAJ40-201ENST00000390497 OR51T1Q8NGJ9 327 aa1.29□□□□□ -2.2
TRAJ40-201ENST00000390497 RNASE11Q8TAA1 199 aaKnown RBP1.29□□□□□ -2.2
TRAJ40-201ENST00000390497 PRAP1Q96NZ9 151 aa1.29□□□□□ -2.2
TRAJ40-201ENST00000390497 ULBP3Q9BZM4 244 aa1.29□□□□□ -2.2
TRAJ40-201ENST00000390497 CHST6Q9GZX3 395 aa1.29□□□□□ -2.2
TRAJ40-201ENST00000390497 ARL2BPQ9Y2Y0 163 aa1.29□□□□□ -2.2
TRAJ40-201ENST00000390497 SAMHD1Q9Y3Z3 626 aaKnown RBP1.29□□□□□ -2.2
TRAJ40-201ENST00000390497 WRNQ14191 1432 aaPredicted RBP eCLIP1.29□□□□□ -2.2
TRAJ40-201ENST00000390497 NAV1Q8NEY1 1877 aa1.29□□□□□ -2.2
TRAJ40-201ENST00000390497 MYO16Q9Y6X6 1858 aa1.29□□□□□ -2.2
TRAJ40-201ENST00000390497 IGHV1-18A0A0C4DH31 117 aa1.28□□□□□ -2.2
TRAJ40-201ENST00000390497 DPRXA6NFQ7 191 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms