RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 ACYP1P07311 99 aa7.53□□□□□ -1.2
LIG3-202ENST00000378526 WDR82Q6UXN9 313 aa7.53□□□□□ -1.2
LIG3-202ENST00000378526 IGHV3-64DA0A0J9YX35 117 aa7.53□□□□□ -1.2
LIG3-202ENST00000378526 F8WEM9 126 aa7.53□□□□□ -1.2
LIG3-202ENST00000378526 TMPRSS2O15393 492 aa7.53□□□□□ -1.2
LIG3-202ENST00000378526 LAGE3Q14657 143 aa7.53□□□□□ -1.2
LIG3-202ENST00000378526 UNQ5815/PRO19632Q6UWF5 114 aa7.53□□□□□ -1.2
LIG3-202ENST00000378526 TPRX1Q8N7U7 411 aa7.53□□□□□ -1.2
LIG3-202ENST00000378526 NOTCH3Q9UM47 2321 aa7.53□□□□□ -1.2
LIG3-202ENST00000378526 SERTM1A2A2V5 107 aa7.53□□□□□ -1.2
LIG3-202ENST00000378526 FBXL15Q9H469 300 aa7.53□□□□□ -1.2
LIG3-202ENST00000378526 IGHV3-43A0A0B4J1X8 118 aa7.52□□□□□ -1.2
LIG3-202ENST00000378526 IGHV3-43DP0DP04 118 aa7.52□□□□□ -1.2
LIG3-202ENST00000378526 TDGF1P13385 188 aa7.52□□□□□ -1.2
LIG3-202ENST00000378526 JPT2Q9H910 190 aa7.52□□□□□ -1.2
LIG3-202ENST00000378526 MRPS18AQ9NVS2 196 aaKnown RBP7.52□□□□□ -1.2
LIG3-202ENST00000378526 SEMA5BQ9P283 1151 aa7.52□□□□□ -1.2
LIG3-202ENST00000378526 A0A0A6YYD5 115 aa7.52□□□□□ -1.21
LIG3-202ENST00000378526 F2Z2F3 143 aa7.52□□□□□ -1.21
LIG3-202ENST00000378526 FSTP19883 344 aa7.52□□□□□ -1.21
LIG3-202ENST00000378526 MIC13Q5XKP0 118 aa7.52□□□□□ -1.21
LIG3-202ENST00000378526 WFDC8Q8IUA0 241 aa7.52□□□□□ -1.21
LIG3-202ENST00000378526 EGR2P11161 476 aaPredicted RBP7.52□□□□□ -1.21
LIG3-202ENST00000378526 LOXL3P58215 753 aa7.52□□□□□ -1.21
LIG3-202ENST00000378526 MARS2Q96GW9 593 aaKnown RBP7.52□□□□□ -1.21
LIG3-202ENST00000378526 RCC1LQ96I51 464 aaKnown RBP7.52□□□□□ -1.21
LIG3-202ENST00000378526 ZNF488Q96MN9 340 aa7.52□□□□□ -1.21
LIG3-202ENST00000378526 RGPD2P0DJD1 1756 aa7.52□□□□□ -1.21
LIG3-202ENST00000378526 C1QAP02745 245 aa7.52□□□□□ -1.21
LIG3-202ENST00000378526 SAA1P0DJI8 122 aaPredicted RBP7.52□□□□□ -1.21
LIG3-202ENST00000378526 OSTCQ9NRP0 149 aa7.52□□□□□ -1.21
LIG3-202ENST00000378526 TMEM131LA2VDJ0 1609 aa7.52□□□□□ -1.21
LIG3-202ENST00000378526 HSF5Q4G112 596 aaPredicted RBP7.52□□□□□ -1.21
LIG3-202ENST00000378526 RFLNAQ6ZTI6 216 aa7.52□□□□□ -1.21
LIG3-202ENST00000378526 RPUSD1Q9UJJ7 312 aaKnown RBP7.52□□□□□ -1.21
LIG3-202ENST00000378526 KLHDC2Q9Y2U9 406 aa7.52□□□□□ -1.21
LIG3-202ENST00000378526 FAM90A10PA6NDY2 464 aa7.51□□□□□ -1.21
LIG3-202ENST00000378526 FAM90A18PA6NE21 464 aa7.51□□□□□ -1.21
LIG3-202ENST00000378526 FAM90A16PA6NEW6 464 aa7.51□□□□□ -1.21
LIG3-202ENST00000378526 FAM90A20PA6NIJ5 464 aa7.51□□□□□ -1.21
LIG3-202ENST00000378526 FAM90A8PA6NJQ4 464 aa7.51□□□□□ -1.21
LIG3-202ENST00000378526 FAM90A7PA6NKC0 464 aa7.51□□□□□ -1.21
LIG3-202ENST00000378526 FAM90A22PA8MWA6 464 aa7.51□□□□□ -1.21
LIG3-202ENST00000378526 FAM90A12PA8MX19 464 aa7.51□□□□□ -1.21
LIG3-202ENST00000378526 FAM90A5PA8MXJ8 464 aa7.51□□□□□ -1.21
LIG3-202ENST00000378526 FAM90A23PA8MXZ1 464 aa7.51□□□□□ -1.21
LIG3-202ENST00000378526 ATOX1O00244 68 aa7.51□□□□□ -1.21
LIG3-202ENST00000378526 FAM90A15PP0C7V4 464 aa7.51□□□□□ -1.21
LIG3-202ENST00000378526 FAM90A13PP0C7W8 464 aa7.51□□□□□ -1.21
LIG3-202ENST00000378526 FAM90A14PP0C7W9 464 aa7.51□□□□□ -1.21
LIG3-202ENST00000378526 FAM90A24PP0C7X0 464 aa7.51□□□□□ -1.21
LIG3-202ENST00000378526 ELNP15502 786 aa7.51□□□□□ -1.21
LIG3-202ENST00000378526 GUSBP1Q15486 140 aa7.51□□□□□ -1.21
LIG3-202ENST00000378526 CXorf67Q86X51 503 aaPredicted RBP7.51□□□□□ -1.21
LIG3-202ENST00000378526 MUC21A0A0G2JKD1 596 aa7.51□□□□□ -1.21
LIG3-202ENST00000378526 MUC21A0A140T8X8 626 aa7.51□□□□□ -1.21
LIG3-202ENST00000378526 IQCF6A8MYZ5 107 aa7.51□□□□□ -1.21
LIG3-202ENST00000378526 IL18BPO95998 194 aa7.51□□□□□ -1.21
LIG3-202ENST00000378526 PRR35P0CG20 571 aa7.51□□□□□ -1.21
LIG3-202ENST00000378526 DRD3P35462 400 aa7.51□□□□□ -1.21
LIG3-202ENST00000378526 MUC21Q5SSG8 566 aa7.51□□□□□ -1.21
LIG3-202ENST00000378526 FAM57AQ8TBR7 257 aa7.51□□□□□ -1.21
LIG3-202ENST00000378526 CACNG8Q8WXS5 425 aa7.51□□□□□ -1.21
LIG3-202ENST00000378526 PIK3C2AO00443 1686 aa7.51□□□□□ -1.21
LIG3-202ENST00000378526 A0A0U1RQV5 110 aa7.51□□□□□ -1.21
LIG3-202ENST00000378526 FOXI3A8MTJ6 420 aaPredicted RBP7.51□□□□□ -1.21
LIG3-202ENST00000378526 HEXA-AS1Q9H8Q6 139 aa7.51□□□□□ -1.21
LIG3-202ENST00000378526 TOMM7Q9P0U1 55 aa7.51□□□□□ -1.21
LIG3-202ENST00000378526 SPTA1P02549 2419 aa7.51□□□□□ -1.21
LIG3-202ENST00000378526 PLXNB1O43157 2135 aa7.51□□□□□ -1.21
LIG3-202ENST00000378526 KIAA1549Q9HCM3 1950 aa7.51□□□□□ -1.21
LIG3-202ENST00000378526 IGHV3-15A0A0B4J1V0 119 aa7.51□□□□□ -1.21
LIG3-202ENST00000378526 DPTQ07507 201 aa7.51□□□□□ -1.21
LIG3-202ENST00000378526 PYY3Q5JQD4 70 aa7.51□□□□□ -1.21
LIG3-202ENST00000378526 NEGR1Q7Z3B1 354 aa7.51□□□□□ -1.21
LIG3-202ENST00000378526 PLPPR2Q96GM1 343 aa7.51□□□□□ -1.21
LIG3-202ENST00000378526 DOCK1Q14185 1865 aa7.51□□□□□ -1.21
LIG3-202ENST00000378526 PPIHO43447 177 aaKnown RBP7.51□□□□□ -1.21
LIG3-202ENST00000378526 FOXL1Q12952 345 aa7.51□□□□□ -1.21
LIG3-202ENST00000378526 GUSBP11Q6P575 273 aa7.51□□□□□ -1.21
LIG3-202ENST00000378526 C1orf122Q6ZSJ8 110 aa7.51□□□□□ -1.21
LIG3-202ENST00000378526 FIZ1Q96SL8 496 aa7.51□□□□□ -1.21
LIG3-202ENST00000378526 OR11H4Q8NGC9 324 aa7.51□□□□□ -1.21
LIG3-202ENST00000378526 MRPL27Q9P0M9 148 aaKnown RBP7.51□□□□□ -1.21
LIG3-202ENST00000378526 MRC1P22897 1456 aa7.51□□□□□ -1.21
LIG3-202ENST00000378526 PATJQ8NI35 1801 aa7.51□□□□□ -1.21
LIG3-202ENST00000378526 A0A087X0K7 114 aa7.5□□□□□ -1.21
LIG3-202ENST00000378526 IGKV3D-11A0A0A0MRZ8 115 aa7.5□□□□□ -1.21
LIG3-202ENST00000378526 IGKV3-11P04433 115 aa7.5□□□□□ -1.21
LIG3-202ENST00000378526 LRP10Q7Z4F1 713 aa7.5□□□□□ -1.21
LIG3-202ENST00000378526 BRK1Q8WUW1 75 aa7.5□□□□□ -1.21
LIG3-202ENST00000378526 GJB3O75712 270 aa7.5□□□□□ -1.21
LIG3-202ENST00000378526 GFRA3O60609 400 aa7.5□□□□□ -1.21
LIG3-202ENST00000378526 ASCL2Q99929 193 aa7.5□□□□□ -1.21
LIG3-202ENST00000378526 ARHGAP21Q5T5U3 1957 aa7.5□□□□□ -1.21
LIG3-202ENST00000378526 IGKV3-7A0A075B6H7 116 aa7.5□□□□□ -1.21
LIG3-202ENST00000378526 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.5□□□□□ -1.21
LIG3-202ENST00000378526 WIPI1Q5MNZ9 446 aaPredicted RBP7.5□□□□□ -1.21
LIG3-202ENST00000378526 F5P12259 2224 aa7.5□□□□□ -1.21
LIG3-202ENST00000378526 ZNF32P17041 273 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms